Carettochelys insculpta (pitted-shelled turtle): 142018023
Help
Entry
142018023 CDS
T11194
Symbol
LAMC1
Name
(RefSeq) laminin subunit gamma-1
KO
K05635
laminin, gamma 1
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Pathway
ciz04510
Focal adhesion
ciz04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
142018023 (LAMC1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
142018023 (LAMC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_N
EGF_laminin
EGF_LMN_ATRN
Laminin_B
Alanine_zipper
Motif
Other DBs
NCBI-GeneID:
142018023
NCBI-ProteinID:
XP_074859561
LinkDB
All DBs
Position
9:complement(56826337..56967719)
Genome browser
AA seq
1594 aa
AA seq
DB search
MGRGALPLLLLLALARRCAAAMDECTDEASGRPQRCMPEFVNAAFNVTVVATNTCGSPAE
EYCVQTGVTGVTKSCHLCDASQPHLQHGAAFLTDYNQADTTWWQSQTMLAGVQYPSAINL
TLHLGKAFDITYVRLKFHTSRPESFAIYKRTREDGPWVPYQYYSGSCEKTYQKLNRGFIR
TGEDEQQALCTDEFSDISPLTGGNVAFSTLEGRPSAYNFDNSPVLQEWVTATDIRVTLNR
LNTFGDEVFNDPKVLKSYYYAISDFAVGGRCKCNGHASECVKNEFGKLSCNCKHNTFGVD
CERCLPFYNDRPWRRATAESANECLSCNCNGRSRECYFDAELYRSTGHGGHCIGCLDNTD
GANCERCRENFYRLGSEEGCRPCNCNPVGSLSTQCDNYGRCSCKPGVMGDKCDRCQPGFH
SLSEAGCRRCSCNPAGSTDDCSIETGRCTCKDNVEGFHCERCKPGFFNLDAANPRGCTPC
FCFGHSSVCTNAVGYSVYNIVSNFRTGEEEWHAEQRDGSEVLLQWSAVTEDISVISDSYF
PIYFIAPGKFLGNQVLSYAQNLTFSFRVDRRDTRLSAEDLVLEGAGLRVSVPLIAQGNSY
PSENTVKYAFRLHEATDYPWRPSLTAFEFQKLLYNLTSVKIRGTYSERNAGYLDDVTIVS
ARPEPGTPATWVESCTCPAGYHGQFCEHCAPGYRRETPSLGPYSLCVLCTCNGHSESCDP
ETGACNCRDNTAGLNCEKCSDGYYGDATTGSSSDCQPCPCPGGSSCAVVPKTQEVVCTNC
PAGTTGKRCELCDDGYFGDPLGENGPARLCRLCQCSDNIDPNAVGNCNRLTGECLKCIYN
TAGFYCDRCKDGFFGSPLASSPEVKCKACSCNPYGTVNQQKSCNQVTGQCECLPHVTERD
CSACDPGFYNLQSGRGCDRCDCHPLGSTDGHCDIQTGQCECQPGITGQRCEKCEVNHFGF
GPEGCKPCDCDTEGSHSLQCKEDGRCECKEGFVGIRCDQCEENYFYNRSWPGCQECPACY
RLVRDKVAEQRERLQELEDLIANLGTGDETVTDQAFEDRLKEAERDVMDLLRDAQKSKDV
DQGLMDRLKEINSTLASQLGRLQNIQNTVQETEGLASQARERVESTEELIEVASNMLERA
KVAVANVSITPPDSSGDPNNMTLLAEEARKLAERHRQEADDIVRIAKAANDTATEAYTLL
LKTLAGENQTANDIDELNRKYNQAKNISRDLEKQANKVLAEAEEAGNKALQIYANLTSLP
VVDTTGLETEANKIKKEAEELGQLIDRKLKDYEDLREDMKGKELEVRNLLEKGRTEQQTA
DQLLARADAAKALAEEAAKKGRDTLQEANDILSNLRDFDKRVNDNKTAAEGALKKIPAIT
RTIAEANNKTRQAELALGNAADDAREAKSKADDAEKIANSVQKNAASTKSEADKAFSDAT
KLDKEVDDMLKQLQAAEKELKRKQEEADQDMMMAGMASQAAQEADDNARKAKTSVASLLT
MINGLLDQLRKLDPVDLNKLNEIEGTLNSAKDQMKDSDLDRKVTELEDAARRQDEAIQAY
NRDIEDILKDISNLEDIKKTLPSGCFNTPSIEKP
NT seq
4785 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgcggggcgctgcccttgctgctgctgctggcgctggccaggcgctgcgccgcc
gccatggacgagtgcacggacgaggcgagcgggcggccgcagcgctgcatgcccgagttc
gtcaacgccgccttcaacgtgaccgtggtggccaccaacacgtgcggctcgccggccgag
gagtactgcgtgcagaccggcgtgaccggggtcaccaagtcctgccacctgtgcgacgcc
tcgcagccccacctgcagcacggcgccgccttcctcaccgactacaaccaggccgacacc
acctggtggcagagccagaccatgctggcgggggtgcagtaccccagcgccatcaacctc
accctgcatctgggaaaggcctttgacatcacatatgtacgcctgaaatttcacaccagc
cgacctgagagctttgccatctacaaacgcacaagagaagatgggccctgggtgccttac
cagtactacagtgggtcctgcgagaagacttaccagaaattgaaccgaggctttatccgg
actggggaggatgaacagcaggcactctgtacagatgagttcagtgacatctctccactc
acaggcggcaatgttgctttttcaacattagaggggcggcccagtgcctacaactttgac
aacagtcctgtgttacaggaatgggtaacggctactgacatccgagtgacccttaatcgt
ctgaacacctttggagatgaagtttttaatgatccaaaagttctgaagtcatattactat
gcaatttctgattttgctgtgggtggcaggtgcaagtgtaatggccacgcaagcgagtgt
gtgaagaatgagtttggaaagctgtcgtgtaactgcaaacacaacacctttggggtggac
tgtgagaggtgccttcccttttacaacgatcggccgtggaggagagcaacagcagaaagc
gccaatgaatgtttgtcttgtaactgcaatgggcgatcacgggagtgttactttgatgct
gaactgtaccgttccacgggccatggtggtcactgcattggctgcttggataacactgat
ggggccaactgtgaaaggtgccgggaaaacttctaccgccttggaagtgaggaaggatgt
cgaccatgtaactgtaaccctgttggctctcttagcacccagtgtgataactatggccgg
tgcagctgcaagcccggtgtgatgggagataaatgtgaccgatgtcagccaggattccac
tccctctcagaggctgggtgcaggcggtgttcgtgcaatcctgctggcagcacagatgac
tgcagtattgaaacagggcgatgtacctgcaaggacaacgtggagggattccactgtgag
agatgtaaacctgggtttttcaatctggatgcagccaatccaaggggctgtaccccttgc
ttctgttttggtcactcctcagtctgcaccaatgccgttggctacagtgtctacaacatc
gtctccaatttccggactggagaggaggagtggcatgctgagcagcgagatggctctgaa
gttttactccagtggagtgctgtgactgaggacatctctgttatttcagacagttatttc
cccatctatttcattgcacctggcaagtttttgggcaaccaggttttgagttatgctcaa
aatctgactttctcctttcgggtggataggcgggacactcgtctttctgcagaggacctg
gtgcttgaaggggctgggcttagagtatctgtgcctcttattgctcagggcaactcttat
cccagcgagaacacggtgaagtatgccttcaggctccatgaagcaacagattacccatgg
aggccttctctcaccgcattcgagtttcagaagctgctttacaacttgacttctgtcaag
atccgtgggacgtacagtgagagaaatgctggatacctggatgatgtcactattgtgagc
gctcgtcctgagcctggaacacctgcgacctgggtggagagctgcacgtgtccggcaggc
taccatggtcaattctgcgagcactgtgccccaggttacaggagagagacacctagcctt
gggccgtacagtctgtgtgtgctgtgtacctgcaatgggcacagtgagagctgtgaccca
gagactggtgcttgcaactgcagagataacactgcaggccttaactgtgagaaatgcagt
gatggctattacggagatgcaactacaggcagttcctcagactgtcagccgtgtccgtgt
ccagggggctccagctgtgccgtagtgccgaagactcaggaggtggtatgcaccaactgt
cctgctggtaccacaggtaaaagatgtgagctgtgtgacgacggttattttggagacccg
cttggtgaaaatggccctgccaggctttgtcgtctctgtcagtgcagcgacaacattgat
cccaatgccgtggggaactgtaaccgcttgacaggggaatgcctgaagtgcatctataac
acagctggcttctattgtgatcggtgcaaggatgggttctttgggagcccgttagcctcc
agccctgaggttaaatgcaaggcttgcagttgtaatccttatggcacagtgaaccagcaa
aaaagctgcaatcaagtaactgggcagtgtgagtgcctgccgcacgtgactgagagggac
tgtagtgcctgtgaccctggcttctacaacctacagagtgggcgtggctgtgacaggtgc
gactgccatccactgggctccaccgatggccattgtgacatacaaacagggcagtgtgag
tgtcagccaggcatcactgggcagcgctgtgagaaatgtgaggtcaaccacttcggcttc
ggccctgaaggctgcaaaccgtgtgactgtgacaccgagggctctcactccctacagtgc
aaggaggatggtcgctgtgagtgcaaggaagggtttgtggggatccgttgtgaccagtgt
gaagagaattatttctacaatcggtcctggcctggctgtcaagagtgtcctgcatgctat
agactggttagagataaggtggcagaacaacgtgagaggttgcaggaactggaagatctt
atagcgaatctcggtacaggagatgaaaccgtgactgatcaggcctttgaggatagactg
aaggaggcagagagggatgtcatggacttgctccgagatgcacagaagagcaaagacgtg
gatcagggcctgatggatcgtctcaaggaaattaacagcactctggcaagccaacttggc
cgactacagaacatccaaaatacagtgcaggagactgaaggccttgccagccaagcccga
gagcgggtggagagcaccgaggagctgattgaagtagcttctaatatgcttgagagggcg
aaggtggccgttgccaatgtgtccattactccgccagactcaagtggtgaccccaacaac
atgactctcttggcagaagaggctcgtaaattggctgaacgacacagacaagaagctgac
gacattgtgcgcatagcaaaggcagcaaacgatacagctacagaagcctatacattgctg
ttgaagactctcgcaggagagaaccaaactgcaaatgacatagatgagctcaacaggaag
tataatcaagcaaagaacatttctcgagacctagagaagcaggctaacaaggtgcttgca
gaggcagaggaagctgggaataaggccctgcagatttatgctaatctcaccagtctgcct
gttgtggacaccacgggcctagagactgaggcaaacaagatcaagaaggaagcggaggag
ctgggtcagctcattgacaggaagttgaaggattatgaggacttgagagaagacatgaaa
gggaaggaactggaagtaaggaacctcttggagaaaggaaggactgaacaacagacagct
gaccagctgctggcccgagctgatgctgccaaagctctagctgaagaagctgccaagaag
ggaagggacacactgcaggaagccaatgacattctcagtaacctgagagattttgacaag
cgtgtgaatgataacaagacagctgctgagggggcactgaagaagattcctgccattacc
cgaaccattgctgaggccaataacaagacaaggcaagcagagctggcgcttggtaatgct
gctgacgacgccagggaagccaagagcaaagcagatgatgctgagaaaattgctaattct
gtccagaagaatgctgctagtacaaagtctgaggccgacaaggctttttccgatgcgaca
aagctggacaaagaagtggatgatatgctgaaacagctgcaagctgcagagaaggagctg
aagaggaagcaggaggaggctgatcaggatatgatgatggcaggcatggcttctcaggcc
gcccaagaggcagatgacaatgcaagaaaagcgaagacctctgttgccagcttactcacc
atgattaatggccttttggaccagctaaggaaactggacccagtggacttgaacaaactg
aatgagattgagggcaccctgaactcagccaaagatcagatgaaagacagtgatttggac
cggaaagtgactgaactggaggatgcagccaggcggcaggacgaagccatacaggcctac
aacagggacattgaggatatcctgaaggacattagcaacctggaagacatcaagaagacc
ttgccgtctggctgtttcaacaccccgtccattgagaaaccctaa
DBGET
integrated database retrieval system
