Carettochelys insculpta (pitted-shelled turtle): 142018043
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Entry
142018043 CDS
T11194
Symbol
RAD54L
Name
(RefSeq) DNA repair and recombination protein RAD54-like isoform X1
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Pathway
ciz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
142018043 (RAD54L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ciz03400
]
142018043 (RAD54L)
DNA repair and recombination proteins [BR:
ciz03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
142018043 (RAD54L)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
Rad54_N
Motif
Other DBs
NCBI-GeneID:
142018043
NCBI-ProteinID:
XP_074859609
LinkDB
All DBs
Position
9:5410201..5434853
Genome browser
AA seq
744 aa
AA seq
DB search
MRRSLAPSQLAKRKPGGDGSEDDEDWHPEATPKKRKPGSETQSWECYISPFRKPLAQLTN
RPHCLDSSKHEAFIRSILSKPFKVPIPNYQGSLGLRALGIKRTGVRNALHDPFEEGALVL
YEPPPLSAHDQLKTDKDKVPVHVVVDPVLGRVLRPHQREGVKFLWECVTSRRIPGSHGCI
MADEMGLGKTLQCITLMWTLLRQSPDCKPEIDKAVVVSPSSLVKNWYNEVGKWLGGRIQP
LAIDGGSKDEIDRKLAGFMSQRGVRVPSPILIISYETFRLHAEVLQKGSVGLVICDEGHR
LKNSENQTYQALNSLNTPRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAQEFKKHFEIP
ILKGRDADASEGERHKGEERLKELISIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQ
AELYKRFLKQAKPAEELTEGNISVSSLSSITALKQLCNHPALIYEKCVEEEEGFAGALEL
FPAGYSPKSLEPQLSGKMLVLDYLLAVTRSTSNDKVVLVSNYTQTLDLFEKLCRTRRYLY
VRLDGTMSIKKRAKIVERFNSLSSPEFVFMLSSKAGGCGLNLIGANRLVMFDPDWNPAND
EQAMARVWRDGQKKTCYIYRLLSTGTIEEKIFQRQTHKKALSSCVVDEEQDVARHFSLGE
LKELFTLNETTASDTHDKIKCRRCVNGHQVKPPPEGSDCTSDLSQWNHCADKRGLQDSVL
KAAWDAAVTFTFHHHSHEEQRGIP
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgaggagaagcctggcccccagccagctggccaagaggaagccagggggtgatggctca
gaggatgatgaagactggcaccctgaggcgactccgaagaagcggaagcctggcagtgag
actcagagctgggaatgttacatatcacctttccggaaacccttggcccagctgaccaat
cgacctcactgcctcgatagcagcaaacatgaggcatttatccgcagcattctgtcgaaa
cccttcaaagtacctattccaaattatcaagggtcactgggcttgagggccctgggcatc
aaacggacgggggtcaggaacgctctccatgacccttttgaagaaggggctctggttctg
tacgagcccccgccactgagtgcacacgaccagctgaaaacagacaaggacaaagtgcca
gtccatgttgtggtggaccctgttctcggtcgcgttttacggccccatcagagagaaggg
gtgaagtttctttgggaatgtgtcacgagccggcggatccctgggagccatggctgcata
atggctgacgagatggggctgggtaagaccctccagtgcatcactctgatgtggacgctg
ctgcgtcagagcccggactgcaagcctgagatcgacaaggcagtggtggtctctccttcc
agcctggtgaagaactggtacaatgaggtcggcaaatggctcgggggaaggatccagccg
ctggccatcgacggaggctccaaagacgagatagaccgtaaactagccggctttatgagc
cagcgtggcgtgcgtgtgccttcccctatcctgatcatctcctacgagacgttccgcctc
cacgccgaagtcctccagaaggggagcgtcgggctggtcatctgtgacgagggccacagg
ctaaagaactctgagaaccaaacataccaggctctgaacagcttaaacaccccccggcga
gttctcatctcagggacccctattcagaacgacctgcttgaatacttcagcctggtgcat
tttgtgaactctggtatcctagggacagcccaggagtttaaaaagcattttgaaatccct
atcctcaaaggcagagacgcagacgcaagtgaaggggagagacataaaggggaagaacga
cttaaagagctgatcagcattgtgaatagatgtctaatcaggagaacttccgacattctg
tctaaatacctacctgtgaaaatcgagcaggtggtttgttgcaggctgacgcctctgcag
gctgaactgtacaaacgcttcctgaagcaggcgaagccagccgaggagctgacggagggg
aacatcagcgtgtcgtctctctcctccatcacggccctgaagcagctctgtaaccacccg
gccctgatctacgagaagtgtgtggaggaggaggaagggtttgcgggagcactggaattg
ttccctgctggctacagtcccaagtccctggagccccagctgtcaggaaagatgctggtg
ttggattacctcctggctgtgactagaagcaccagcaacgacaaggtcgtcctggtctcc
aattacacccaaactctggacctctttgagaagctctgcaggactaggaggtatttatat
gtccgactggacggcaccatgtccattaaaaagagagcgaagattgtagagcgcttcaac
agcctgtcgagccctgagttcgtcttcatgctgagcagcaaagcaggtggctgcggcttg
aacttgatcggggcaaacagactcgtcatgttcgacccggattggaatccggccaacgat
gaacaagccatggcgcgagtgtggcgagacggccagaagaagacctgctacatctacagg
ttgctctcgacagggacgatcgaggagaagattttccagcgacagacccacaagaaggcg
ctgagcagctgtgtggtagatgaggagcaggatgtggcgaggcacttctcactgggggag
ctgaaggagctgttcaccttgaatgagaccacagccagtgatacccatgacaagattaag
tgtcgccgctgtgtgaacggccaccaggtgaagcctcctcctgaaggctccgactgcacg
tctgacctctcccagtggaaccactgtgctgacaagcgcgggctgcaggactctgtgctg
aaggcagcgtgggatgctgctgtcaccttcacgttccatcaccattctcacgaagagcag
cgagggattccctga
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