Carettochelys insculpta (pitted-shelled turtle): 142018182
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Entry
142018182 CDS
T11194
Symbol
SMC4
Name
(RefSeq) structural maintenance of chromosomes protein 4 isoform X1
KO
K06675
structural maintenance of chromosome 4
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ciz03036
]
142018182 (SMC4)
Chromosome and associated proteins [BR:
ciz03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
142018182 (SMC4)
Condensin II
142018182 (SMC4)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
AAA_29
ABC_tran
Vac_Fusion
Motif
Other DBs
NCBI-GeneID:
142018182
NCBI-ProteinID:
XP_074859806
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Position
10:31786370..31933443
Genome browser
AA seq
1292 aa
AA seq
DB search
MPSRSTKTSTAAHQKGKKPLEESTSDTDVERGGDICLSEASPQDSNGFLDNRSLEEILSS
ISPPPPPAMTNEAGAPRLMITHIVNQNFKSYAGEQILGPFHKRFSCIIGPNGSGKSNVID
SMLFVFGYRAQKIRSKKLSVLIHNSDEHKNIQSCTVEVHFQKIIDKEGDDYEVIPNSNFC
VSRTAYRDNSSVYHISGKKKTFKDVGILLRSHGIDLDHNRFLILQGEVEQIAMMKPKGQN
EHDEGMLEYLEDLIGSGRLKDPIQALCRRVEVLNEQRGEKLNRVKMVEKEKDALEGERNK
AIEFLSLENKMFTEKSRICQYYIYDLQNRIIDMETQKKKIHEDTRDINLKSSKLADEMKV
KNKALKDVEKKLNKITKFIEENKEKFTQLDLQDVTVREKLKHAKSKAKKLQKQLEKDKEK
VEQFKCVPGNSETTISEVTSKKKVLEKEKEQEEEKLKLVMDSLKQETQGLQEEKEGKEKE
FMELSKTVNEARSKMGVAQSELDIYLSHHNTAVSQLNKSKEALKTISETLKERIAGIKEL
DTKLPQAEQELKQKQKELEKLGKEEMDLKNLVRELRQKVEETKTSLAINLSRGKVLSALL
QQKKSGKIPGIYGRLGDLGAIDEKYDVAISSSCGALDYIVVDTIDTAQECVNFLKSQGIG
VATFIGLDKMKVWEKSMNKIQTPENTPRLFDMVKVKDEKIRQAFYFALRDTLVANNLDQA
IRVAFQKDKRWRVVTLQGQIIEQSGTMSGGGLKVMKGRMGSSIVAEISEEEANKMESQLH
KDSIKATQYQEERVKLEEVIAKLRLSVQEMRNTLEKYTASIQSLSEQEAHLKVQVKELEA
NVIAAAPDKIKQKQLEKNLNTFKKDYECVSEKASKVESEVKRLCNLIIEINNHKLKAQQD
KLDKINKKIDECASAITKAQVAIKTADRNLKKTEESVFRTEKEIEDNEKEMKELTEELTT
LEEKATEVMNNCKQAEESLPEVQEEHRNLLQKIKAIQEDEHALQKEALNIRLKIEQIDSH
IGEHQLKIKYWQKEISKISLHSLEDKLVEELPVLNQEELEAIKDPDIITNQIALLEAQCH
EMKPNLGAIAEYNKKEELYLKRVAELDDITTERDNFRRAYEDLRKQRLNEFMAGFNVITN
KLKENYQMLTLGGDAELELVDSLDPFSEGIMFSVRPPKKSWKKIFNLSGGEKTLSSLALV
FALHHYKPTPLYFMDEIDAALDFKNVSIVAFYIYEQTKNAQFIIISLRNNMFEIADRLIG
IYKTHNTTKSVATNPKVIASKGLAELGSVGCC
NT seq
3879 nt
NT seq
+upstream
nt +downstream
nt
atgccaagcaggagcaccaaaacctccactgcagcccatcaaaaaggcaaaaagcccttg
gaggaatccactagtgatacagatgtggaaagaggtggtgatatatgcctcagtgaagca
tctccgcaagactccaacgggtttcttgataatcgaagtttagaagaaattttgagtagc
atctctcctcccccacctccagcaatgaccaatgaagctggagctcctcgcctcatgata
actcatattgtaaaccagaacttcaaatcctatgcaggggagcaaattctgggaccattt
cataagcgtttttcttgtattattggaccaaatggtagtggaaaatccaatgtcattgat
tcaatgctctttgtatttggatatcgggcacaaaaaatcaggtccaaaaagctttctgtg
ctgatccataattctgatgagcacaagaacatacagagttgtactgtggaagttcacttt
caaaagatcattgacaaggaaggggatgattatgaagtcattcccaacagcaatttctgt
gtatctagaactgcctacagagataattcttctgtctaccacatcagtgggaagaagaaa
acattcaaagatgttggtattctacttcgaagccatggaattgacctggaccacaataga
ttcttaattttacagggagaagtcgaacagattgctatgatgaaaccaaaaggccagaat
gaacatgatgaaggtatgcttgaatacttagaagacctaataggatcaggacggttaaaa
gatcccattcaagctctgtgtcgtagagttgaggtgttaaatgagcagagaggagagaag
ttaaacagagttaaaatggtggagaaagaaaaagatgctttagaaggagagagaaacaaa
gccattgaatttctttctttggaaaacaaaatgtttacagaaaagagtcgtatttgccag
tactacatctatgatctgcagaatcggataattgacatggaaacacaaaagaaaaaaatt
catgaagacactagagatattaatctgaagagtagtaaacttgctgatgaaatgaaagtt
aaaaataaagctctgaaagatgtagaaaaaaaactcaataaaattacaaagttcatagag
gaaaacaaagagaaatttactcagctggatttgcaggatgttacagtaagagagaaacta
aaacatgccaaaagcaaagctaaaaaacttcagaagcagcttgaaaaggataaagaaaag
gttgaacaatttaaatgtgttcctggaaacagtgagacaactatcagtgaggtaacatct
aagaaaaaagttcttgaaaaggaaaaagagcaagaagaagaaaaattaaaactagtcatg
gatagtcttaaacaggaaacacaaggacttcaagaagagaaagagggcaaagaaaaagaa
tttatggaattaagcaaaacagtgaatgaagcacgttctaagatgggtgtagcccagtca
gaacttgatatctacctgagtcaccataatacagcggtatctcagttgaataaatcaaaa
gaggctttaaagaccatttcagaaaccctgaaggaaaggatagctggtatcaaagagcta
gatacaaaattgcctcaagctgaacaggaattaaaacagaaacagaaggagcttgagaaa
cttggaaaagaggaaatggaccttaagaatcttgtccgagagcttcgtcagaaggtagaa
gaaacaaaaacttctttggcaataaatctcagtcgaggaaaggttcttagtgctctactt
cagcagaagaaatctggaaaaattcctggaatatatggaagactgggagacttgggtgct
attgatgaaaagtatgatgttgctatttcatcatcttgtggtgctttagactacattgtt
gtagatacaattgatacagctcaggaatgcgtgaatttcttgaagagtcaaggaattgga
gttgctacatttataggcttggacaaaatgaaagtatgggaaaaaagtatgaataaaatt
cagactccagaaaacactcctcgtctctttgatatggtgaaagtaaaagatgaaaagatt
cgccaagccttttactttgcactacgtgatactctagtagccaataacttggatcaggct
atcagagtagccttccaaaaggacaaaagatggagagttgtaactttgcaaggacagatc
atagaacagtcaggaacaatgagtggaggtggacttaaagtaatgaaaggtagaatggga
tcctccattgtggctgaaatttcagaggaagaggccaataaaatggaatctcagcttcac
aaggattccataaaagcaacgcaataccaagaagagagagtgaagcttgaagaagttata
gctaaattgcgtctaagtgtccaggaaatgagaaacactttagaaaagtatactgcaagt
attcagagtttatcagaacaagaagctcacttgaaagtccaggttaaagaacttgaggct
aacgtaattgcggctgctcctgacaaaatcaaacagaaacagctagaaaaaaaccttaat
actttcaaaaaagattatgagtgtgtttctgaaaaggctagtaaagtggaaagtgaagtt
aaaagattatgtaatctcataattgagatcaataatcataaacttaaagctcagcaagat
aaacttgataagataaacaagaaaatagatgaatgtgcttctgctattactaaagcccag
gtcgcaatcaagactgcagacagaaacctgaaaaaaacagaagaatctgtttttcgcact
gagaaggaaattgaagataatgaaaaggaaatgaaagagctaacagaagagttaacaaca
ttagaagagaaagctactgaagttatgaataactgcaaacaagctgaagaatcattacca
gaagttcaggaggagcatcgcaatttacttcaaaagattaaagcaattcaggaagacgaa
catgctcttcagaaagaagctcttaatattagacttaaaattgaacaaatagacagtcac
attggtgagcatcaattgaagattaaatattggcaaaaagagatatcaaaaatttcactg
cattccctagaagataaacttgttgaagagcttccagtgctaaatcaagaggaacttgaa
gcaattaaagatccagacataataactaatcaaatagctcttttagaagcccagtgtcat
gaaatgaaaccaaatcttggtgccattgcagaatataataaaaaggaagaactgtacttg
aaacgtgtggcagagttggatgacattaccactgagagagacaactttagacgggcttat
gaagaccttagaaaacaaaggcttaatgagtttatggcaggatttaatgtaataacaaat
aaactaaaggaaaattaccaaatgcttaccttgggaggcgatgctgagttagagcttgta
gacagtctggatcctttctctgaaggaatcatgttcagtgtccggccaccaaagaaaagc
tggaagaagatatttaatctgtcaggaggagagaagactcttagttcactagctttggtg
tttgcacttcatcattacaagccaactcccctttacttcatggatgaaattgatgcagcc
cttgacttcaaaaatgtatcaattgtagcattttacatatatgagcaaacaaaaaatgca
caatttatcatcatctctttgcgaaataacatgtttgaaattgcagatagattaattgga
atttataagactcacaatacaacaaaaagtgttgcaacaaatccaaaagttattgcatct
aaaggacttgctgagcttggttctgttggatgctgctga
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