Carettochelys insculpta (pitted-shelled turtle): 142018340
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Entry
142018340 CDS
T11194
Symbol
POLR2D
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB4
KO
K03012
DNA-directed RNA polymerase II subunit RPB4
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Pathway
ciz03020
RNA polymerase
ciz03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
142018340 (POLR2D)
09124 Replication and repair
03420 Nucleotide excision repair
142018340 (POLR2D)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ciz03021
]
142018340 (POLR2D)
03400 DNA repair and recombination proteins [BR:
ciz03400
]
142018340 (POLR2D)
Transcription machinery [BR:
ciz03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol II specific subunits
142018340 (POLR2D)
DNA repair and recombination proteins [BR:
ciz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
142018340 (POLR2D)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb4
Maelstrom
Tfb4
BIG2_C
Motif
Other DBs
NCBI-GeneID:
142018340
NCBI-ProteinID:
XP_074860175
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Position
10:complement(6893625..6902230)
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AA seq
142 aa
AA seq
DB search
MAAGGGELRAADVEEDASQLIFPKEFETAETLLNSEVHMLLEHRKQQNESAEDEQELSEV
FMKTLNYTARFSRFKNRETIASVRSLLLQKKLHKFELACLANLCPETAEEAKALIPSLEG
RFEDEELQQILDDIQTKRSFQY
NT seq
429 nt
NT seq
+upstream
nt +downstream
nt
atggcggccggcggcggcgaactccgggcggcggacgtggaggaggacgcctcgcagctc
atcttccccaaagaatttgaaacagccgagacacttctaaattcagaagtgcacatgctt
cttgagcatcgtaaacaacagaatgagagtgctgaggatgagcaggagctctcagaagtc
ttcatgaaaactctgaactacacggctcgcttcagccggttcaaaaaccgagagacaatt
gccagtgttcgcagtttgctgctccagaaaaagctccataaatttgaattggcatgtttg
gctaatctgtgtcctgagacagctgaggaagccaaggctctgattcccagcctagagggc
cggtttgaagatgaggagctgcaacagattcttgatgacattcagaccaaacgaagcttt
cagtattag
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