Carettochelys insculpta (pitted-shelled turtle): 142018361
Help
Entry
142018361 CDS
T11194
Symbol
SNED1
Name
(RefSeq) sushi, nidogen and EGF-like domain-containing protein 1 isoform X1
KO
K24470
insulin-responsive sequence DNA-binding protein 1
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ciz04990
]
142018361 (SNED1)
Domain-containing proteins not elsewhere classified [BR:
ciz04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
142018361 (SNED1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF
NIDO
hEGF
EGF_TEN
fn3
EGF_2
EGF_CA
EGF_3
Fn3_Dep-1_3rd
FN3_DSCAM-DSCAML_C
cEGF
NDNF
EGF_Teneurin
Fn3_SaeA_4th
Motif
Other DBs
NCBI-GeneID:
142018361
NCBI-ProteinID:
XP_074860206
LinkDB
All DBs
Position
10:557065..634949
Genome browser
AA seq
1443 aa
AA seq
DB search
MRGPAGWTLLLALGNWVWVEGLVPLADFYPFGLEQGDAVTLKQDDGGSGLQPISVTFPFF
GVGHTGLYVNNNGIISFLKEVSQFTPVAFPISNDRCVVAAFWADVDNRRAGEVYYRESRD
QTILERATKDIGQYFPEFPEFSALWVFVATWHQVTFFGGSSFTPVNTFQIVLITDGKLSF
TIFNYESITWTTGMHASSGGDLAGLGGIAAQAGFNAGDGKRYFNIPGSRTDDIVDVEMTT
NVGIPGRWVFRIDDAQVQVGGCNNTTSACLTLRPCLNGGRCIEDCITGNPSYSCSCLAGY
TGKRCHLDVDECLSHPCQNSAICINGINSFTCQCLPGFKGAMCETAESPCETKECQNGGQ
CHVANSTAVCVCQAGYAGDSCEREINECDSSPCLHGGHCIDLVDNYTCVCVEPFVGQRCE
TDPTLCEDRSCRNRQTCNYIRPGRYICTCSPGYYGSNCQYGGPLMPSACLSSPCLHGGHC
VETRQGYVCECPDGYTGTDCREKLSEGCECRNGGQCLEGNFTICQCPPGYFGLLCEFEVT
TTPCNMNTQCPDGGYCMEYGGSYLCVCQTDYSTNHSATSPCDSEPCLNGGSCEAHDDSYT
CECPRGFNGRHCEKARPRPCSSGPCRNGGTCKEADGEYHCACPYRFTGKHCEIGKPDPCA
SGPCQNGGTCFHYIGKYKCDCPPGYAGRHCEIAPSPCFLSLCENGATCQDHGSNYTCVCP
VGYVGEFCQSEVDCGAPSEVKHARALFNSTRLGAVAEYQCEQGYALRSQNNPRVCRAQGV
WSDPPECDEIDECGSQPCFNGGLCKDRVAQFLCVCEAGYTGTLCELEIDECQSDPCKNGG
TCKDRPGAFVCHCPDGFVGHQCETEVDACESAPCRNGGDCEHYRGSYLCVCPEGFFGYHC
ETASDPCFSSPCGSQGYCLPRNGSHSCTCKAGYTGKSCEKDLLPPTSLKVDRVEDMGVLI
SWHPPEDPAARQMIDGYAVTYVSFDGSYRRTDFVDRSHSAHQLRALAPGRAYNISVFSVK
RNVNNKNDISRPVMLITRTRPRPVEGFAIANVTASAITVQWALQHASVSKVRLSLRQPGA
PEGRTVELNSSLAKYAFRDLRPGERYLVHASALSGLRTDHPSESLATAPFHVWTRPLPPG
NLTASRVSPTSVSLRWEQPPAGAVEGYIINVTTSQSTKSRYVPNGRLSSYTVRDLLPGQR
YRLSVTAVQSTEQGQGHSEPAHLHVLTLQRDGTLERRWGQAGHPRVLRNRPPPALLPELR
LLADHDIPEEPSQAPSFTELVDGRGRVSAKFGSLPYQPITMRTQPEVPVKLENMEESTNR
VGLALQLSDSEHQKRERDSQNCSTNPCTNGGTCVLGGEAYLCDCIPGFKGKRCELACKKV
PHSCTRLYSETTSFPVWDGGVCHYVYKRVYKVHQDICYKESCESTSKKTGTRKQSPSRTL
KKP
NT seq
4332 nt
NT seq
+upstream
nt +downstream
nt
atgcggggcccggctggctggacactgctcctagccctggggaactgggtttgggtcgag
ggtcttgtgcctctggctgacttttacccctttggcttggagcagggggatgctgtcact
ttgaaacaggatgatggaggctccgggcttcagccaatctcagtgacattccctttcttt
ggagtgggacacacaggactgtatgtaaacaacaatggaatcatctctttcttgaaggaa
gtttcccagtttacaccagtcgctttcccaatctccaatgaccggtgtgtggtagcagct
ttctgggctgatgtggataaccgacgggcaggtgaagtgtattaccgggaaagtagggac
cagaccatcttggagagagccaccaaggacatcggacagtattttcctgaattcccagag
ttctctgccctctgggtttttgtggccacctggcaccaggtcactttctttggaggaagc
tcctttactccagtgaacaccttccagattgtcctcatcactgatggtaaactctccttt
accatctttaactacgagtctatcacgtggaccacaggcatgcatgccagcagtggggga
gatttggcaggcctggggggcattgcagcacaggcaggtttcaatgccggtgatggaaag
cgctacttcaacatccccggatcccgcaccgatgacatcgttgacgtggagatgacgaca
aatgtgggtatccccgggcgctgggtgttcagaatcgatgatgcccaggtgcaagtgggg
ggctgcaacaacacaacctctgcgtgtttgaccttacgcccctgcctgaacggggggaga
tgtatagaggactgcatcacaggaaatccctcctactcctgctcctgcctcgcgggctac
acaggcaagagatgccatcttgatgtggatgagtgcctttcccacccgtgtcagaacagt
gccatctgtatcaacggcatcaacagcttcacctgccagtgcctgcctggcttcaaagga
gccatgtgtgagacggcagagtcgccgtgtgagacaaaggagtgccagaatggcgggcag
tgccacgtggccaacagcacggccgtgtgtgtgtgccaggcagggtacgcaggggactcc
tgcgagagggaaataaacgagtgtgactccagcccctgcctgcatgggggacactgcatc
gatctggtggataactacacgtgtgtgtgtgtggagcccttcgtgggacagcgctgtgag
acagaccccacactgtgtgaggacaggagctgcaggaaccgtcagacctgtaattacatc
cgcccgggacgctacatttgcacgtgttctccaggctactatggcagcaactgccagtac
ggtgggcccctgatgccaagtgcctgtctctccagcccgtgcctgcacggggggcactgt
gtggagacgcggcaaggctatgtctgtgaatgccctgatgggtacacgggcactgactgc
cgagagaagctctcggagggctgcgagtgtcggaatggggggcagtgtctggaggggaac
ttcaccatctgccagtgtccgcctggatattttggactcctctgtgaatttgaagtgacc
actacaccttgcaatatgaacacacagtgtccagatgggggctactgcatggagtacggg
ggcagctacctgtgcgtatgtcagacggactacagcaccaaccactctgcgacgtctccc
tgcgactctgagccctgcttgaacggagggtcctgcgaagcccacgatgactcgtacacc
tgtgaatgtccccggggcttcaacggcaggcactgcgagaaagcccggccaaggccgtgc
agctctgggccctgtcgcaacggggggacgtgtaaggaggcggacggcgagtaccactgt
gcctgcccctaccgcttcaccggcaagcactgcgagataggtaaacctgacccctgtgcc
tccgggccgtgccagaacgggggcacgtgcttccactacatcggcaagtacaagtgtgac
tgcccccccggctacgcgggccggcactgtgagatcgccccttctccttgtttcctgagt
ctgtgtgaaaacggagcaacctgtcaggaccacggcagcaactacacctgcgtgtgcccc
gtgggatatgtgggagagttctgccagtcagaggtggactgcggtgcccccagtgaggtg
aagcatgcccgagcgctgtttaactccacccgcctgggcgctgtggcggagtaccagtgt
gagcaaggctacgccttgcggtctcagaacaacccccgtgtctgcagagcacagggcgtc
tggagtgaccccccagagtgcgacgagatcgatgagtgcgggtctcagccctgcttcaac
gggggcttgtgcaaggaccgtgtggcccaattcctgtgtgtgtgtgaagcaggatacaca
ggcaccctctgtgagttggagattgatgaatgtcagtctgacccctgtaagaatggagga
acctgcaaggatcgcccaggagcctttgtgtgtcattgtcctgatggctttgtcggacac
cagtgtgagacagaggtggatgcctgtgagtcggctccctgccggaacggaggggactgt
gaacactacagggggtcctacctgtgtgtctgcccagaagggttcttcggctaccactgt
gagacggccagtgacccttgtttctccagcccgtgcgggagccagggctactgcctgcct
cgcaatgggtcccacagctgcacctgcaaggcgggctacacaggcaagagctgtgaaaaa
gacctgctgccaccaacttcattaaaggtggacagggtggaggacatgggggtgttgatt
tcttggcacccccctgaagacccagccgccaggcagatgattgacggctacgccgtgacg
tacgtatccttcgacggctcttaccgcaggactgattttgtggaccgaagtcattctgcc
caccaattgcgggcgctagcccccggcagagcctacaatatttctgtcttttcagtcaaa
cgcaacgtgaacaacaagaacgacatcagcaggcctgtcatgctcatcacacgcactaga
cctcgcccagtggagggatttgccatcgccaacgtgacagccagtgccatcacagtgcag
tgggctctgcagcacgcctcggtcagcaaagtgcgcctctccctccgccagccgggggcc
ccagagggccgcaccgtggagctgaacagcagcctggccaaatacgcgttcagggaccta
aggccaggggagaggtaccttgtccacgcgtcggccttgagcgggctgcggacagatcat
ccctccgagagcctggccacagcccccttccatgtctggacacggcctctccctccgggg
aacctcactgcctcgagagtcagccccacctccgtctccctgcgctgggagcagccgccg
gcaggggccgtggagggttacatcatcaacgtcaccaccagccagagcaccaagagccgc
tatgtgcccaatgggcggctctcgtcttacacggtgcgggacctgctgcccgggcagcgg
taccgcctgtcggtgacggctgtccagagcacggagcaaggccaggggcacagtgagcca
gctcacctccacgtcctgaccctgcagagggacgggaccctggagaggcgatggggccaa
gctggacacccccgggtgctcaggaacaggccccccccagcgctgcttccggaactgcga
ctgcttgctgatcacgacatcccggaggagccctcacaggcccccagcttcactgagctg
gtggatggccgaggaagggtcagtgccaagttcggcagcttgccataccagcccatcact
atgcgaacgcaacccgaggtgccagtgaagctggaaaacatggaggaatcaaccaaccgg
gtgggcctggcactgcagctgtctgactctgagcaccagaagagagagcgtgacagccag
aactgctccacaaacccctgcacgaatgggggcacctgtgtcctgggtggtgaggcctac
ctctgtgactgcatccctggcttcaagggcaagcgctgcgaactagcctgcaagaaggtg
ccccactcatgcacccggctgtactccgaaaccacgtccttccctgtctgggatggtggt
gtctgccattacgtatacaagagagtctacaaagtccaccaggacatctgctacaaggag
agctgcgagagcacttcaaagaagacaggcaccaggaaacaaagtcccagtcgcacactg
aagaagccgtag
DBGET
integrated database retrieval system
