Carettochelys insculpta (pitted-shelled turtle): 142018620
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Entry
142018620 CDS
T11194
Symbol
AIRE
Name
(RefSeq) autoimmune regulator
KO
K10603
autoimmune regulator
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Pathway
ciz04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
142018620 (AIRE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ciz03000
]
142018620 (AIRE)
04121 Ubiquitin system [BR:
ciz04121
]
142018620 (AIRE)
Transcription factors [BR:
ciz03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
SAND domain-containing proteins
142018620 (AIRE)
Ubiquitin system [BR:
ciz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
142018620 (AIRE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSR
DDE_Tnp_4
PHD
SAND
PHD-1st_NSD
PHDvar_NSD
Plant_tran
W2
Motif
Other DBs
NCBI-GeneID:
142018620
NCBI-ProteinID:
XP_074860682
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Position
10:complement(5229..63108)
Genome browser
AA seq
737 aa
AA seq
DB search
MRRALTVQKRVGIAVWKLATPDSYRSVGQQFGVGKATVGAVFMEVVRAINAMLLHRLVRL
GDPDATIAAFATLGFPNCFGALDGTHIRIRAPHHSGGRYLNRKGYHSVVLQALVDSWGRF
QDIYVGWPGSTHDARVFRNSGLCRWLEAGTYIPQREIPLGDTTMPFCCCCAEEFLLLQLK
PPQIRIHCSMSGTDRPWGEGGLRKLLKLYRTEISMAVDDVFPLLHGLADHDVVTEEMFQE
TLSLKEQKGSHKAFHAMLTWLLSQDSSSIQDFWKVLFKDYNLERYSKLQPIRSSFPKDMD
LNRQRRGRKPPPSPKVLAQQKQQSKRKASEERDSPLPAQPLLKCSLNPGTILKAKAVKKP
EGVEIQRFPLGNGIQTMAASVQRAVTVSSSELPMSCGAVEGILIKQVFESGGSKKGVKVG
GEFYAPSKFEELGGKNKSRNLKPGVRTKGSQGPQHNGDLKINSQSRLHVTPVHSKDQTLH
QKNDDECAVCRDGGELICCDGCPKSFHLACLVPPLTEIPSGTWRCISCSARKVKQDQCIE
EERAQEPPSETQGLYGQRAAGERERILIKEPTPGSDASLTFKQPLPPAPSASPMPVTMSA
STLQPPPSLGPERQLKLTAGERCGVCRGGGDMTYCTQCFKAFHNHCHFPAQAEQLSEILL
CKTCSGSSGTSGLEGTETSHNPTLRAVKVVEESIGNDTILNKEELDSLLGESSFDGILQW
AFQNMSRPLSDTHGFFS
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgcggcgtgccctcacagtgcagaaacgggtcggcatcgctgtctggaagctggccact
ccagacagctaccgatccgtgggccagcagtttggtgtcggcaaggccaccgtcggggct
gtcttcatggaggttgtgcgtgccatcaacgccatgctcctgcacaggctcgtgaggctg
ggggacccagatgccaccatcgccgcctttgccaccctgggcttccccaactgcttcggg
gctctggatgggactcacatccgcatccgcgccccgcatcacagtggaggacgatacctc
aatcgaaagggctaccattctgtcgtcctccaggccttggtggacagttggggacgtttc
caggacatttacgtgggctggcctggcagcacccacgacgcccgggttttccggaactcg
ggcctgtgccgctggctggaggcggggacctacatcccccagcgggagatccctctgggg
gacaccaccatgcccttctgctgttgctgtgcagaggagttccttttgctccagctgaaa
cctccacaaatccgtattcattgcagcatgtccggcactgacaggccttggggtgaaggg
ggcctgcggaagctgttgaagctgtatcgcacggagatctcaatggcagtggacgatgtt
ttcccattgcttcatggactagctgatcatgatgttgtgacagaggagatgttccaggaa
acactgagtctgaaggagcagaagggttctcacaaggctttccatgccatgctgacatgg
cttctgagtcaggactcatcctccatccaggacttctggaaggtccttttcaaggattac
aacttggagagatactccaaactccagcctattcggagcagctttcccaaagatatggat
ctcaacagacagcgccgtgggaggaaaccaccccccagccccaaagtcttggcacagcag
aagcagcagtcaaagaggaaagcctcagaggaaagggactcgcccctgccagctcaaccc
ttgctgaaatgcagcttgaaccctgggaccatcctgaaggcaaaagctgtaaagaaacca
gaaggtgtagagatccagcgtttccctctgggcaatggcatccagactatggctgcctca
gtccagagggctgtcactgtgtcatccagtgaactaccaatgagctgcggggctgtagaa
ggaattctcatcaaacaagtgtttgagtcaggaggctccaagaaaggagtcaaagttgga
ggcgagttttatgcaccaagcaaatttgaggaacttgggggaaagaacaaaagccgaaac
ctgaagcctggtgtgcgaaccaagggatcacaagggccccaacataatggggacctgaaa
ataaattcacagagcaggctccatgtgacccctgttcacagcaaggatcaaacacttcat
cagaagaacgatgatgaatgcgcagtgtgcagggatggcggagagctaatctgctgcgac
ggctgccccaaatctttccacctggcctgccttgtaccccccctgacagaaattccaagt
gggacatggaggtgcatctcttgctcagctcggaaagtgaagcaagaccagtgcatagaa
gaggaacgggcccaagaaccaccatctgagacacagggtctttatggacagagggcagct
ggagaaagggagagaattcttatcaaggaacccacaccaggatctgatgcctcattgacc
ttcaagcaacctctgccccctgcaccttctgcctcaccaatgccagtgacaatgtctgcc
tcaaccctccaaccaccgccaagtctgggcccagagagacagctgaaactgacagctggt
gagagatgtggagtctgcaggggaggaggagacatgacttactgtacccagtgcttcaag
gcctttcacaaccattgccactttcctgcgcaagcagagcagctcagtgaaatcttgcta
tgtaagacctgctctggcagctctggaaccagtggcctggagggaactgagacctcacat
aatcctacactaagagcagtgaaggttgtggaagagtctattgggaatgacacaatcctg
aataaagaggagttggattctctcctgggtgagagttcttttgatgggatcctgcagtgg
gcattccagaacatgtctcgtccactgtcagatactcacggatttttctcctag
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