Carettochelys insculpta (pitted-shelled turtle): 142018622
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Entry
142018622 CDS
T11194
Symbol
CROCC2
Name
(RefSeq) LOW QUALITY PROTEIN: ciliary rootlet coiled-coil protein 2
KO
K16469
rootletin
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ciz03037
]
142018622 (CROCC2)
Cilium and associated proteins [BR:
ciz03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
142018622 (CROCC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rootletin
DUF745
CENP-F_leu_zip
Motif
Other DBs
NCBI-GeneID:
142018622
NCBI-ProteinID:
XP_074860684
LinkDB
All DBs
Position
10:448938..550271
Genome browser
AA seq
2016 aa
AA seq
DB search
MSEWDDQKPGLRLEAAIQFGKEKTERGHDNTFQKLEVTVLSPEASKEDKTLTVQGGRDQD
TPTPVLVRIRQIVTESLTEESSQALWKTTCPLNMQEENRMLQKELLRLEEQLAHTWAEKE
ELESKHHAISERLEKMLLVEAKQGAGDGGLALVELRQRFEADEKACKDKLQAYQEGQQRK
VQLVQRLQNKVLQYKKRCGELEQQLLEKMSDSEHEKQMTRLECTEPHLHCAEHDHSTGLK
NTLLLLEQEQQRSSSLSQMNMLLREQLDQMKCSNQRLAGKLERTTSDLNRLRGKLEQRVS
QRGSRQESGGAFLRNEHPGVLLLWHQAAVLRSNLAELRAMAERGLVEAQTDLARTTRSLQ
VACLNLDSNLRLSESSVVCSLERQVLQGAHLEQQLQEKVREMLQLQSHWDAEKVQLNSRI
TELTVLGEELREQNAKKERAMSALKLDLQKLEATKTGEQLEVQDLKNKSESLQRILNSIT
QLALADTESAGTLSLESARGTAAEDSGKHISLLHSIPAPGWQVSPSLSPLCQNAALEAVQ
GALRRRQQQAQDLQMQLDSTRDVLGAIRKQLSDSQQKVQVAEQQLQEQRQQHEELTRALQ
DCRRDLQFCKSSVENLTREKETSEAMVGSLREQVDSSHLEMERQRTLTQQLQRQQSLLEE
QKEELVKEYERARQELERGQRSLEQSEERTSALKKELVMVKESLNQAILEKEVLENEKEG
VSQALSKVTASNVELELALSKLRSQDSELRDSLAKMAALNEGLAQDKVNLNCLLLKLEEE
KGSLLEQRQALEQERASLQEQLAHLEQELAWTSVARRGLEQSCQASEERQEALEGEMKVL
RREKAQLQDQLKQVSSQQHALNEQLVHSHQELGIQAEALLHATQEKEQLAAEQSRLALKV
GALQRQRKGLLAEMNTLRAEKDSLETGLFQMQELAEQLEAREEQLERENRSLDQARQGLQ
GEVGKAQQELELQEVMLRRERESLKQQLVQLEQEAQLSLQSQKQAHEEALGHLSQEKERQ
CLALMGEKEEAVHQLQQEKEELLSKWEAEKEELAEEILSLQQEREKSLVLLETDKQKALS
FKEAEKSLLAEKLSEAQQELTNIRVEVDQVKLEALNHQEQDKNTIARLGSELHTAQVRFE
EAVAAHQREAQSLKELIKELARERETRGKEAEELRTQLQLKEGAREKVQRELAELQRRLR
EGEEAQELQHKETLETRRALGDEIREKEIMQQSNSELRATIKKTESERLSLKRSLEEKEQ
RVVVLEDAQAAAQKEVELLRASLWEVEKSRTEAHHKLRELCGQVKTLEGETSKKGKEVSK
LQACLLQEAQREHRCHWQALQLKKKLVEMEGAREGVQKEVLSLQRQLAEVASESRAREKE
LLDSLAESHTKQKQLRDELHNMELKLQQAGGASEGLQLHLSTAEGHLRGLETELAQTEAA
KREVEVKLGMLHSALRQTLGLGVRSPSLQRHHSPSKANDGPQTPASRAGSPERSCSHSPF
GYASSCQGVPGASEPDPDGIQDSLRDFLQELRDTQRERDDLRIQVMNLSRQLSEMERSQA
RSGSRILQLQRLLADAEEGQQDTEGHLSQTRTALTLQEETLRRGERESQALAEHASTLEH
SLHAQQGKTRELQENVARQKAKETKLEMEKQRLKEVLEAAENRAIKLELSHHSMEGELQR
IRLSLVDRDTEIQALQEQAQALRYQLAHSKSKSAELQQELGCLGHSLAQTENEENHVKDK
VHSFSHALTDASAGSSTLQENVSQLQKALTAAEQDRRVLQEHLDAVRQALSDSKRQNHSL
MDTMHMLQDQLGQLELQCRELEAQVEHLQEVVQQQQQSERQAVVSLQNVQEENSILQERL
ATLQGAVAHLERENKELRQDNSSLKKTLSKVERERLRNGGPAMQQSAEKEQLDHSLNSLH
QEVEDTLRQNQQLQAHITRLEQAHAQHLRELLSRHQLELETERLHSMQLQAEWSLERAHK
QRVKDLENQVNSLREQLEQEXQKRQSYLTQVLWAGN
NT seq
6051 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagtgggatgaccagaaaccaggactgaggctggaggctgcaatccagtttgga
aaagagaagactgagaggggacatgataacacttttcagaaactagaagtcactgtcctg
agcccagaggccagcaaagaggacaagacactgactgtgcagggaggcagggaccaagac
acgcctaccccagtcttggtcaggattcggcagattgtcactgagagcctcaccgaggag
tcgtcccaagcactgtggaaaacaacctgtccactcaatatgcaagaagaaaaccgtatg
ctgcagaaggagctcttgcgcctggaggagcagctggcacacacctgggcagagaaggag
gagctggagagcaagcaccatgccatcagtgagaggctggaaaagatgctgctggtggaa
gcaaagcaaggggcgggggatggtggcctggcactcgtggagctgaggcagcggtttgag
gctgacgagaaggcatgcaaggacaagctgcaggcctatcaggaagggcagcagcgcaag
gttcagctggtccagcggctccagaacaaggtactgcagtacaagaaaagatgtggggag
ctggagcagcagctgctggagaaaatgtctgactctgagcacgagaagcagatgactcgg
ctggagtgcacagagccccacctgcactgtgcagagcatgaccacagcacaggcctgaag
aacacccttctcctcctggagcaggagcagcagaggagctccagcctttcccagatgaac
atgctgctgcgggaacagctggaccagatgaaatgctccaatcagagactggcagggaag
ctggagaggacaacctcagacctgaacaggctgagaggcaagctggagcagagagtgtcc
cagcggggcagcagacaggagagtggtggggcgttcttgcgcaatgagcaccctggggtc
ctgctgctctggcaccaagctgctgtgctgcgcagtaatctggcggagctgcgtgccatg
gcggagcgaggcctggtggaggcccagacagacctggcaaggaccacgcgcagccttcag
gtggcctgcctgaacctggactcgaacctgcgcctgtcagagagtagtgtggtctgctcg
ctggagaggcaggttttgcagggggcacacttggagcagcagcttcaggagaaggttcgg
gagatgcttcagctccagagtcactgggacgcagagaaagtacagctcaactccaggata
acagaactgactgtactaggagaggagctgagagaacagaatgcaaagaaagagagggcc
atgtctgctctaaaactggacctccagaagctggaagccactaaaactggagagcaactg
gaggtccaggacttgaaaaacaaaagtgaatcattacagcgaatcttgaacagcatcaca
cagctggctctggctgacacagagagtgcagggaccctctccctggagagcgctagaggc
acagctgcagaagactctggcaaacacatctcccttttgcactccatccctgcccctggc
tggcaggtgtcgccatccctctccccgttgtgccagaatgctgccctggaagcagtgcag
ggcgccctccggaggcgacagcagcaggcgcaggatttgcagatgcagctggactccacc
cgggacgtgctgggggctataaggaagcagctgtccgatagccagcagaaggtgcaggtg
gctgagcagcagctacaggagcagaggcagcagcacgaggagctgaccagagccctgcag
gactgcagacgggacttgcagttctgtaaatcctcagtggagaatctcaccagggagaag
gagacctcagaggccatggtgggaagtctgagggagcaggtggactcttcccatctggag
atggaaaggcagaggacactcactcagcagctgcagaggcagcagagccttctggaggag
cagaaggaggagctggtcaaggagtatgagagagccaggcaggagctggagcgagggcaa
aggtccctggagcagtctgaggagaggacctcagccttgaagaaggagctggtgatggta
aaggaatccttgaaccaggcgattctggagaaggaggtgctggagaacgagaaggaaggt
gtaagccaggcactatccaaagtcacagccagcaatgtggagcttgaactagccctaagc
aagctaagatcgcaggactccgagctgagagactcactggccaagatggcagctctgaat
gaaggtcttgcccaggacaaggtcaacctcaactgtcttctcttaaagctggaagaagag
aagggctccctgctggagcagaggcaggcactggagcaggagcgagccagcctgcaagag
cagctggctcacctggagcaggagctggcatggacaagtgtggccaggcgagggctggag
cagagctgccaagcgtcagaggagaggcaggaggcactggagggagagatgaaggtgctg
cgcagggaaaaagcacagctgcaggatcagctgaagcaggtgagcagccagcagcacgcc
ctgaatgagcagctggtacacagccaccaggagctgggaatccaggctgaggccctgctc
catgccacccaagagaaggagcagcttgctgctgagcagtcccggctggccttgaaggtc
ggtgcactgcagaggcaaaggaagggccttctggcagagatgaacacgctcagagctgag
aaggactcgctggagactggcctgttccagatgcaggagctggcagaacagctggaagcc
agggaggaacagctggaaagggagaatcggagcctggaccaggcgaggcaaggcctccaa
ggggaggtggggaaggcccagcaggagctggagctgcaggaggtcatgctgaggcgggaa
agagagtccctgaagcagcagctggtgcagctggaacaagaggctcagctgtctctgcag
agccagaagcaggcccatgaggaggccttggggcacctgtcccaggagaaggagaggcag
tgtctggccctgatgggggagaaggaagaggctgtgcaccagctgcagcaggagaaggag
gagctgctgtccaaatgggaagctgaaaaggaggagctagctgaggaaatcctgagtctg
cagcaggagcgagagaaaagccttgtcctgctggagacagataagcagaaggcgctgtcc
ttcaaggaagcggagaagagtttgctggcagagaagctcagcgaggcccagcaggagctc
acgaacatcagggtggaggtcgaccaggtgaagctggaggcgctgaaccaccaggagcag
gataagaacaccatcgcgaggctcggcagcgagctgcacactgcccaggttcgctttgaa
gaggcggtggctgcccaccagagagaggcccagagcttgaaggagctcataaaggagctg
gcgagagagagggagactcgggggaaggaggcagaagagctaagaacgcagctgcagcta
aaagagggtgctcgtgaaaaggtgcagagggagctggctgagctgcagcgcaggttgcgg
gagggcgaggaggcccaggagctccagcacaaggagacgctggaaacccgcagggccttg
ggggatgagatcagggagaaggaaataatgcaacaatccaactccgagctgcgcgccacc
atcaagaagacagagagtgaaaggctcagcttgaagagaagccttgaggagaaggagcag
agagtggtggtgctggaggatgcccaggctgcagctcagaaggaagtggaattgctgagg
gcaagcctgtgggaggtggagaagtctcggacggaggcccaccacaagctgcgtgagctg
tgcggacaggtgaagactctggagggtgagaccagcaagaagggcaaagaggtgagcaag
ttgcaggcctgtctgctgcaggaggcacagcgggagcaccggtgccattggcaggccctg
cagctgaagaagaagcttgtggagatggagggtgcccgggaaggtgttcagaaagaggtg
ctcagcctgcagaggcagctggcggaggtggcgtcggaatccagagctagagagaaggag
ctgctcgacagcctggctgagagtcacaccaagcagaagcagctccgggacgagctccac
aacatggagctgaagctgcagcaggctggcggagccagcgaaggcctccagctgcacctc
agcactgccgaggggcacctccgtggcttggagacagagctggcccagacagaagctgcc
aagcgggaggtagaggtgaagctggggatgctgcactctgccctgcgccagacgctaggc
ctgggcgtgcggagcccctcgctgcagagacaccactcccctagcaaagcaaatgatgga
ccacagactccggcctcccgtgctggctctccagaaaggagctgttcccactcccccttt
ggctatgcttcctcttgccaaggggtgcctggcgccagcgagcctgacccagacggcatc
caagattccttgcgagacttcctgcaggagctgcgagacactcagcgggagcgggatgat
ctaaggatccaggtgatgaacctgagccgtcagctgagcgaaatggagaggagccaggcg
cggagtggcagtcgcattctgcagctgcagaggttgctggcagatgctgaggaaggccag
caagacacagaagggcacctgagccagacacggacagccctgacactgcaggaagagacc
ctccggagaggggaaagggagagccaggccttggctgagcacgcttccaccctggagcac
agcctgcatgcacagcaggggaagaccagggagctgcaggagaatgttgctaggcagaaa
gccaaggagaccaagctggagatggagaagcagaggctgaaggaagtcctggaggcagcc
gagaacagggccatcaagctggagttgagccatcactcaatggaaggggaactccagcgc
atccggctcagcctggtggaccgagacaccgagatccaggccctgcaagaacaagcccag
gccctgcgctaccagctggcgcatagtaagagcaaatcagctgaactgcagcaggagctg
ggctgcctgggtcactcactggcccagacggagaatgaggagaaccacgtgaaggacaag
gtacacagcttttcccacgcactgactgatgcctccgcagggtcctccaccctccaggag
aatgtctcccagctgcagaaagctctaacagcagcagagcaagaccgccgggtgctgcag
gagcacttggatgccgtgcggcaggcgctgtcggacagcaagaggcagaaccatagcctg
atggacaccatgcacatgctgcaggaccagctgggccagctggagctgcagtgcagggaa
ctggaggcccaggttgagcacctgcaggaggtagtccagcagcagcagcagagcgagcgg
caggctgtagtatcgctgcagaacgtgcaggaggagaacagcattcttcaggagagactg
gcgacactgcaaggagctgtagcccacctggaacgggagaacaaggagctgaggcaggat
aattcttccctgaagaagaccctcagcaaggtagagcgggagaggctcaggaatggaggc
cctgccatgcagcagagtgcggagaaggaacagctggaccactcactgaacagccttcac
caggaggtggaggacaccctgagacagaaccagcagctgcaggcccacatcacgaggctg
gagcaggcacacgcccagcacctgagagagctgttatctcggcaccagctggagctggag
acagagagactgcacagcatgcagctccaagctgagtggtcgctggagagagcccacaag
cagcgtgtaaaggacttggagaatcaggtgaactcgctgagggagcagttggagcaggaa
nnacagaagagacagtcctacctcacacaggtgctgtgggcaggtaactga
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