Carettochelys insculpta (pitted-shelled turtle): 142018713
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Entry
142018713 CDS
T11194
Symbol
TRIP12
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Pathway
ciz04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
142018713 (TRIP12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ciz04121
]
142018713 (TRIP12)
Enzymes [BR:
ciz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
142018713 (TRIP12)
Ubiquitin system [BR:
ciz04121
]
Ubiquitin ligases (E3)
HECT type E3
142018713 (TRIP12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WWE
UNC45-central
HEAT_2
HEAT_Maestro
Motif
Other DBs
NCBI-GeneID:
142018713
NCBI-ProteinID:
XP_074860805
LinkDB
All DBs
Position
10:complement(20999891..21165897)
Genome browser
AA seq
2066 aa
AA seq
DB search
MSNRPNNNPGGSLRRSQRNTAGAQPQDDTVGGRSHLGQAKHKAHRPPESKKSISKAPKVQ
SNTTSEQSRGHFSKRGCSSSAVIIPQEDPDRISTSERQKTGQVPKKDQSRGVKRSASPDY
NRTNSPSSAKKPKALQYTETFSETSKPHTKSKKRHLDQEQQLKSAQLPSTSKAHTRKGGA
TGSSRNQKRKRTESSSCIKSGTAVESTGVEERSAKPSKLASKSATSAKAGCSNITDSSSS
ASTSSSSSAVASASSTVPQGARVKQGKDQSKARRSRSASSPSPRRSSRDKEQNKTGGSSK
FDWAARFSPKVSLPKTKLSLPGSSKSETSKPGPSGLQAKLASLRKSTKKRSESPPAELPS
LRRSTRQKTTGSCASTSRRGSGLGKRGAAEARRQEKMSDPDNNQDGVNSSAARTDEAPQG
AAASSSVAGAVGMTTSGESESDDSEMGRLQALLEARGLPPHLFGPLGPRMSQLFHRTIGS
GASSKAQQLLQGLQATDESQQLQAVIEMCQLLVMGNEETLGGFPVKSVVPALITLLQMEH
NFDIMNHACRALTYMMEALPRSSAVVVDAIPVFLEKLQVIQCIDVAEQALTALEMLSRRH
SKAILQAGGLADCLLYLEFFSINAQRNALAIAANCCQSITPDEFHFVADSLPLLTQRLTH
QDKKSVESTCLCFARLVDNFQHEENLLQQVASKDLLTNIQQLLVVTPPILSSGMFIMVVR
MFSLMCSNCPTLAVQLMKQNIAETLHFLLCGASNGSCQEQIELVPRSPQELYELTSLICE
LMPCLPKEGIFAVDTMLKKGNAQNTEGAIWQWRDDRGLWHPYNRIDSRIIEAAHQVGEDE
ISLSTLGRVYTIDFNSMQQINEDTGTARAIQRKPNPLANTNTSGHSELKKDDARAQLMKE
DPELAKSFIKTLFGVLYEVYSSSAGPAVRHKCLRAILRIIYFADAELLKDVLKNHAVSSH
IASMLSSQDLKIVVGALQMAEILMQKLPDIFSVYFRREGVMHQVKNLAESEALLTSPPKT
CTNGSGTLGTTTTISTGTATSASNATADLESPSLQHSREDSLDLSPQGRLSDVLKRKRLP
KRGPRRPKYSPPRDDDKVDNQAKSPTTTQSPKSSFLASLNPKTWGRLSTQSNSNNIEPAR
TAGVSGLARAASKDTISNNREKIKGWIKEQAHKFVERYFSSENMDGSNPALNVLQRLCTA
TEQLNPQVDGGAECLVEIRSIVSESDVSSFEIQHSGFVKQLLLYLTSKSEKDAVSREIRL
KRFLHVFSSSPPPEEEPLGRLEPVGNAPLLALVHKMNNCLSQMEQFPVKVHDFPSGNGTG
SSFSLNRGSQALKFFNTHQLKCQLQRHPDCANVKQWKGGPVKIDPLALVQAIERYLVVRG
YGRVREDDEDSDDDGSDEEIDESLAAQFLNSGNVRHRLQFYIGDHLLPYNMTVYQAVRQF
SLQAEEERESTDDESNPLGRAGIWTKTHTIWYKPVREDEDGNKDCVGGKRGRAQTAPTKT
SPRNSKKHDELWHDGVCPSVSNPLEVYLVFTPPENITFEDPSLDVILLLRVLHAISRYWY
YLYENAVCKEIIPTTEFINSKLTAKANRQLQDPLVIMTGNIPIWLTELGKTCPFFFPFDT
RQMLFYVTAFDRDRAMQRLLDTNPEINQSDSQDSRVAPRLDRKKRTVNREELLKQAESVM
QDLGSSRAMLEIQYENEVGTGLGPTLEFYALVSQELQRADLGLWRGEEVTLSNPKGSQEG
TKYIHNLQGLFALPFGRTAKPAHIAKVKMKFRFLGKLMAKAIMDFRLVDLPLGLPFYKWM
LRQETSLTSHDLFNIDPVVARSVYHLEDIVRQKKRLEQDKSQTKESLQYALETLNMNGCS
VEDLGLDFTLPGFPNIELKKGGKDIPVTIHNLEEYLRLVIFWALNEGVSRQFDSFRDGFE
SVFPLSHLQYFYPEELDQLLCGSKTDTWDTKTLMECCRPDHGYTHDSRAVKYLFEILSSF
DSEQQRLFLQFVTGSPRLPVGGFRSLNPPLTIVRKTFESTENPDDFLPSVMTCVNYLKLP
DYSSIEIMREKLLIAAREGQQSFHLS
NT seq
6201 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccggcctaataacaatccaggggggtcactgcgacgttcacagaggaacact
gccggggcccaaccacaagacgacacagtaggaggaaggtcacatttagggcaggcaaaa
cataaggcacatagaccacctgagagtaaaaaatctatttcaaaggcacccaaagtgcag
tctaatactacttctgagcagtccaggggacacttttctaaaagaggctgtagttcgtct
gcagttataataccgcaagaggacccagacagaatcagtacttcagagaggcaaaaaacg
gggcaggtgcctaagaaagaccaatctcgaggagtaaaacgcagtgctagcccagattat
aacaggaccaattcccctagctctgctaaaaaacccaaagcacttcagtatactgaaact
ttctcagaaacaagcaagccacatactaaatctaagaaaagacacttagatcaagaacaa
cagttaaaatctgcacaattgccatcaacaagcaaggctcataccagaaagggtggagct
accggtagctcccgaaatcagaaaaggaaaaggacagagagctcatcgtgtataaagagt
ggtacagcagttgaatcaactggtgttgaagagaggtctgcaaaacccagcaaactggct
tcaaaatcagcgacctcagccaaagctgggtgtagcaacatcactgattcttcttcttca
gcatctacatcctcctcctcttctgctgttgcctctgcttcttctactgttcctcagggt
gccagagtaaaacaaggaaaagaccagagcaaggcgagacgctcccgttctgcatctagt
cccagtcccagaaggagtagcagagataaagaacagaataaaacaggtggctcttcaaag
tttgactgggctgctcgcttcagtccaaaagttagcctgcctaaaacaaaactgtctcta
ccaggctcttcaaagtcagagacatcaaaacctggaccatcaggattacaggctaaacta
gcaagtttaagaaaatctactaagaagcgcagtgaatcaccacctgcagagctccccagt
ttgaggcggagcacacggcaaaagaccacgggctcctgtgctagtacgagtcggcgaggc
tctggcctgggcaaaagaggagcagctgaagctcgccgacaggaaaaaatgtctgatcct
gataacaaccaggatggtgttaattcttcagctgcacgtacagatgaggctccgcaagga
gcagcagcatccagttctgttgcgggggctgtcggcatgacaacttctggagaaagcgag
tcggatgactctgagatgggaagactacaggctctgttagaagccaggggtcttcctcct
cacttgtttggccctcttggtcctcgtatgtcgcagctgttccataggacaatcgggagt
ggagctagttctaaagcccagcagcttcttcaggggctccaagccactgatgaaagtcag
cagctacaggcagtaattgagatgtgtcaattgttggttatggggaatgaagaaacgttg
ggtggatttccagtcaagagtgttgtaccagctttgataacattgctgcagatggagcac
aactttgatattatgaaccatgcttgtcgagccttaacgtatatgatggaagcacttccc
agatcatctgctgtagtggtagatgcaattcctgtctttttggaaaagctgcaagttatt
cagtgtattgacgtggcagagcaggcactaactgccttggagatgttatcacgtaggcat
agtaaagccattctgcaggcaggtgggttggcagactgtctgctgtatctggagttcttc
agcataaacgcccagaggaatgcactagctattgctgccaactgctgccagagcatcaca
cctgatgagtttcactttgttgcagattctctgccactgcttacacaaaggctaacccat
caggacaaaaagtcagtagaaagcacttgtctctgttttgcacggctagtggacaacttc
caacatgaggagaatttgcttcagcaggttgcctctaaggatttgctcacaaacattcag
caactcttggtagtgactcctcccatcctgagctcaggaatgttcatcatggtggtgcgc
atgttttccttaatgtgctccaattgtcctacactagcagttcaacttatgaagcaaaat
attgcagaaacacttcacttccttctttgtggagcctcaaatgggagctgtcaagaacaa
attgagcttgttccccgaagtcctcaagaactttatgagcttacttctcttatatgtgaa
ctgatgccttgcctgcctaaagaaggaatctttgctgttgatactatgctaaagaaagga
aatgcacaaaacacagaaggggcaatttggcagtggcgagatgataggggtctgtggcat
ccttataacaggattgatagccgaataattgaggcagctcatcaggttggggaggatgag
ataagtctgtctacactggggcgtgtttatacaattgacttcaattctatgcagcaaatc
aatgaagacactgggacagcacgtgctattcagagaaaacctaaccccttagccaatact
aataccagtggacactcagaattaaagaaagatgatgctcgagcacagctgatgaaagag
gacccagaactggctaaatcctttattaaaacattatttggtgttctttatgaagtgtat
agctcttcagctggacccgctgttagacacaagtgccttagagcaattcttaggataatt
tattttgctgatgctgaacttctgaaggatgtactgaaaaatcatgctgtttcgagtcat
attgcctccatgctatcaagtcaagaccttaagatagtagttggagcccttcagatggca
gagatcttaatgcaaaaattacctgacatttttagtgtttacttcagaagagaaggggtg
atgcaccaagtgaagaatcttgcagagtctgaggctttgctgacaagcccaccaaaaaca
tgcactaatgggtcaggaacgctgggtaccactacaacaataagcactggaacagccacc
tctgccagtaatgcaactgcagatttggagtctcctagcttacagcacagccgggaagac
tctctggatctgagcccacagggccgactaagtgatgttttaaagagaaaacgactgcca
aaacgtgggccccgaaggccaaagtattcacctccaagagatgatgacaaagtagacaat
caagctaaaagccctacaactactcagtctcctaaatcttccttcttggcaagcttgaat
cctaaaacttggggaagattaagcacacagtccaacagcaacaacattgaaccagcacgc
acagcaggagtcagtggtcttgcaagggctgcctcaaaggacaccatatccaacaataga
gagaaaattaagggttggattaaagaacaggcccataaatttgtggagcgttattttagc
tctgagaacatggatggaagcaatcctgcactaaatgtattacagaggctttgcactgca
actgaacaactcaacccccaggtggatggtggagctgagtgccttgtagaaatccgtagc
atagtctctgagtctgatgtctcctcatttgaaatccagcatagtgggtttgttaaacag
ctgctgctttacttgacgtctaaaagtgaaaaagatgctgttagtagagagatccgatta
aaaagattccttcatgtgttttcttcttctccacctccagaagaagagcctcttggaaga
ttagagccagtaggaaatgcacccctgttggcattagtccacaaaatgaacaactgtctc
agtcagatggagcagtttcctgtcaaagtgcatgattttcccagtggaaatggaacaggg
agcagtttttctctcaacagaggatcccaagctttaaaatttttcaacacacatcaatta
aaatgccagctgcaaagacatccggattgtgccaatgtgaaacagtggaagggtggacct
gtgaagatagatcccctggctttggtgcaagccattgaaagataccttgtagttagagga
tatggaagagttagagaagatgatgaggacagtgatgatgatggctcagatgaagaaata
gatgaatctttggctgctcagttcttaaattcaggcaatgtgaggcacagattgcagttt
tacattggagatcacttgctgccatataatatgactgtgtatcaagcagttagacagttc
agtttacaagctgaagaagagcgggaatctacagatgatgaaagcaaccctttgggaaga
gctggaatttggacaaagacacacaccatatggtacaaaccggttcgagaggatgaagat
ggtaataaggactgtgttggaggtaaaagaggaagagcacaaacggctcccacaaaaact
tctcctagaaattcaaaaaaacatgatgagttgtggcatgatggggtgtgcccttctgtg
tcaaatcctttagaagtttaccttgtatttacgccgcctgaaaatataacatttgaagat
ccctcgttagatgttatcctccttttgagagttttacatgctatcagtcgatattggtat
tatctgtatgaaaatgcagtttgcaaggagattattccaaccacggaatttatcaacagt
aaactgacagcaaaagctaacaggcagcttcaggatcctttagtaatcatgacaggaaac
ataccaatttggctgacagaacttggaaaaacatgcccatttttctttccatttgacact
cggcaaatgctgttttatgtaactgcttttgatcgagatcgagcaatgcagagattgcta
gataccaatccagaaatcaatcagtcagattctcaggacagcagagtggcaccacgacta
gacaggaaaaaacgcactgtgaacagagaagagctgttgaaacaagcagaatctgtgatg
caagatctaggcagttcaagagctatgttggaaatccagtatgagaatgaagttggcaca
ggtctagggcctacactggagttttatgcacttgtatctcaggaactacagcgagcagac
ttaggcctctggagaggagaagaagtaactctatccaatccaaaaggaagccaagaaggc
acaaagtatattcataatctccagggcctatttgcacttccttttggtagaacagctaaa
ccagctcacattgcaaaggttaaaatgaagttccgttttctgggaaaactaatggccaag
gctatcatggatttcagattggtggatcttccccttggtcttcctttttacaaatggatg
ttacgacaggaaacttccctaacctcacatgacttattcaatatcgatccagtagtggct
agatcagtatatcatctggaagatatagtgagacagaagaaaagacttgaacaggacaaa
tcacagaccaaagaaagtttacagtatgcattggaaaccctcaatatgaatggctgctca
gtggaagatctagggctggatttcacattacctgggtttcccaatatagagctgaaaaaa
gggggaaaagatatacctgtcaccatccacaatttagaagaatatctccgactggtaata
ttctgggcactaaatgaaggtgtttccagacaattcgactctttcagagatggatttgaa
tcagtcttccccctcagtcatcttcaatacttctatcctgaagagttggatcagctccta
tgtggcagtaaaacagacacttgggatacaaagacgctaatggaatgctgcaggccagat
catggttatacacatgacagtcgagctgtgaaatacctgtttgaaattcttagtagtttt
gatagtgagcaacaaagattgtttctccagtttgtgactggtagccctagactgcctgta
ggaggctttcgaagtttgaatcctccactgacaattgtacgcaagacatttgagtctaca
gaaaatccagatgacttcttgccctcagtaatgacttgtgtgaattatctcaaattgccg
gactattcaagtattgagataatgcgtgagaaactcttgatagctgcaagagaagggcag
cagtcattccatctttcctga
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integrated database retrieval system
