Carettochelys insculpta (pitted-shelled turtle): 142019096
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Entry
142019096 CDS
T11194
Symbol
SF1
Name
(RefSeq) splicing factor 1 isoform X1
KO
K13095
splicing factor 1
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Pathway
ciz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
142019096 (SF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ciz03041
]
142019096 (SF1)
Spliceosome [BR:
ciz03041
]
Complex A
Other components
Complex A specific factors
142019096 (SF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
KH_1
zf-CCHC
KH_12
zf-CCHC_3
KH_NusA_1st
zf-CCHC_5
Motif
Other DBs
NCBI-GeneID:
142019096
NCBI-ProteinID:
XP_074861620
LinkDB
All DBs
Position
11:17241149..17258615
Genome browser
AA seq
780 aa
AA seq
DB search
MAATGANATPLGKLHPPPPPGKQGYPMPPPGPPGLVLPGPPPPPPPGPGQAQAALLGPMA
AAAYPFAALPPPPPPPPPPPPPPQPQPPPQQPQPPPPPPPPPPPQQQQQQPPQAGGPQPP
PQYGQYRYPSPPPPPQGHEQQQPPPPPPQQQQQQQPQKDESGPGGGSNHDFPNKKRKRSR
WNQDTMEQKTVIPGMPTVIPPGLTREQERAYIVQLQIEDLTRKLRTGDLGIPPNPEDRSP
SPEPIYNSEGKRLNTREFRTRKKLEEERHNLITEMVALNPDFKPPADYKPPATRVSDKVM
IPQDEYPEINFVGLLIGPRGNTLKNIEKECNAKIMIRGKGSVKEGKVGRKDGQMLPGEDE
PLHALVTANTMENVKKAVEQIRNILKQGIETPEDQNDLRKMQLRELARLNGTLREDDNRI
LRPWQSAETRNVTNTTVCTKCGGAGHIASDCKFSRPGDPQSAQDKARMDKEYLSLMAELG
EAPVPSSVGSSSGPTSTPLSSGPRPSGPGNNPPPPNRPPWMNSGPSDNRPYHGMHGGPGG
PGGPHNFHHPMPNMGGHGGHPMQHNPNGPPPWMQPHHPPMNQGPHPPGHPGPHHMDQYLG
NTPVASGVYRLHQGKGMMPPPMGMMAPPPPPPSGQPPPPPSGPLPPWQQQQPPPPPPSTS
MASSTPLPWQQSSTTTTTTSAGTGSIPPWQQQGGAASMGGPQMQGNPSMVPLPPGVQPPL
PPGAPPPPPPPPPPGSGGMMYAPPPPPPPMDPSNFVTMMGVPALPPFGMPPAPPPPPPQN
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgacgggagccaacgccacgccgttagggaagctccatccacccccaccaccg
gggaagcaggggtacccgatgcctccgccgggcccaccgggactggtccttccaggtccc
cctcctccaccacctccgggcccaggccaggctcaagccgccttactgggccctatggcg
gctgctgcgtatcccttcgccgcgctgccgccgcctccgcctcctcctcccccaccccct
ccgccgccccagcctcagcccccgccgcagcagccgcagccgcctccgccgccacccccg
ccacctccgccgcagcagcagcagcaacagccaccccaggctggggggcctcagcccccc
cctcaatacgggcagtaccggtacccgtctccgccgccgcccccgcagggccacgagcag
cagcagcccccgccgccgccgccgcaacagcagcagcaacaacaaccgcagaaggatgag
agcggcccgggagggggcagtaaccacgatttccctaataagaagcggaagagaagcaga
tggaaccaagacaccatggaacagaagactgtcatcccaggaatgcccactgttatcccg
cctggactcactcgtgagcaagagagagcttatatagtgcaactgcagattgaagacctg
actcgtaaactgcgcacaggagacctgggcatcccccctaacccagaggacaggtcccct
tcccctgagcccatttacaatagcgagggaaagcgtctgaacacccgtgagtttcgcacc
cgcaaaaagctggaagaggagagacataacctcatcacagagatggtggctctcaacccg
gatttcaagccaccagctgattacaaacctccagcgacccgagtgagcgataaggtgatg
atcccacaagatgaatatcctgagattaactttgtggggcttttgattggacccagagga
aataccctgaagaatattgagaaggagtgcaatgcgaagatcatgatccggggcaagggg
tcagttaaggaagggaaggtgggccgaaaagatggccagatgctacctggagaagatgag
cctctccatgctctggttactgccaacaccatggagaatgtgaagaaggctgtggaacag
atccggaatatcctgaagcaaggcatcgaaacaccagaggaccagaatgacctgcggaag
atgcagctacgggagttggcccggcttaatgggacgctgcgggaagatgacaacaggatc
ctgcggccatggcaaagtgcagaaacccgcaacgtcacaaacaccactgtgtgtaccaaa
tgtggaggagctggccacattgcctctgactgcaagttttcgaggcctggtgaccctcag
tctgctcaggacaaagcccgcatggacaaagaatacttgtccttgatggcagagttggga
gaagctccagtcccatcatctgtgggatcttcctctggacctaccagtacacctctgtca
agtgggcccagaccctcgggaccaggaaacaacccacctcctccaaaccgtcctccatgg
atgaactctggcccatctgacaaccggccctaccatgggatgcatggaggacctgggggc
ccaggtggacctcacaacttccaccacccaatgcccaacatgggtggtcatggtggccat
ccaatgcagcataatcctaatggcccgccaccctggatgcagccacatcatccacccatg
aatcaagggccacatcctccaggtcacccaggcccgcaccacatggatcagtacctggga
aatacgcctgtggcctctggggtctatcgcctgcatcaaggaaaaggtatgatgccgccg
ccgatgggtatgatggccccgccgccccctccgcccagtggtcagcctcccccgcctccc
tctggtcctcttcccccatggcagcagcagcagcctccaccaccaccccccagcaccagt
atggcgtccagtactcccttgccatggcagcaaagttcgacgaccaccaccaccacgagc
gctggcaccggatccatcccgccatggcagcagcaggggggggcggcttctatggggggc
ccgcagatgcaaggcaacccctccatggtccctttgccgccaggggtccagcctccgctg
ccgcccggggccccgcctccgccgccgccgccgccgccgcctggctccgggggcatgatg
tacgccccgccccctcccccaccccccatggacccttctaattttgttaccatgatggga
gtgccggctttgccaccattcggcatgcctcctgcacctccaccccccccaccacagaac
tga
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