Carettochelys insculpta (pitted-shelled turtle): 142019151
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Entry
142019151 CDS
T11194
Symbol
SYVN1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Pathway
ciz04120
Ubiquitin mediated proteolysis
ciz04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
142019151 (SYVN1)
04120 Ubiquitin mediated proteolysis
142019151 (SYVN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ciz04121
]
142019151 (SYVN1)
Enzymes [BR:
ciz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
142019151 (SYVN1)
Ubiquitin system [BR:
ciz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
142019151 (SYVN1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-RING_16
zf-C3HC4_3
zf-RING_11
zf-RING_5
zf_RING_Vps8_fungal
zf-ANAPC11
zf-RING-like
U-box_ZFPL1
FAR1_N
zf-HC5HC2H
zf-C3H2C3
zf-Nse
Endonuclease_7
zf-RING_Vps41
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
142019151
NCBI-ProteinID:
XP_074861744
LinkDB
All DBs
Position
11
Genome browser
AA seq
626 aa
AA seq
DB search
MFRSAVIMAASLALTSAVVAHAYYLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKF
MGKVFFGQLRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWLFHFRIISLMLLLGVLDFLFVSHAYHSILTRGASVQLVFGFEYAI
LMTMVLTIFIKYILHSVDLQSENPWDNKAVYMLYTELFTGFIKVLLYMAFMTIMIKVHTF
PLFAIRPMYLAMRQFKRAVTDAIMSRRAIRNMNTLYPDATPEELQAMDNVCIICREEMVT
GAKRLPCNHIFHTSCLRSWFQRQQTCPTCRMDVLRTSLPAQSQTPAEQQEQAQQQQPQPH
QTPLIPQPPNFPQGILPPFPPGMFPLWPPLGPFPPVPGVQPPNNAENPSAVPSAPSTSGG
QTTASTSRPGGGSASGSDTAPVGTVPGFPFPPPWMGMPLPPLFGFPPMPVPPAGFAGLTD
EELRAMEGHDRQHLEARLQCLQNIHTLLDAAMLQINQYLTVLATIGSPRPTQLPSSLNTS
ASSQETPANESTTFNSPDSTSSPGTSPAMEPDSTGQTDLSGLVGAEGYTAPAGHEEGEEQ
PLPGEPDTAELRRRRLQKLESSPPSH
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgttccgatcagcagtcattatggctgccagcctggctctgacatcggcagtagtggct
catgcctattacttgaagcaccagttctatccaacagtggtgtacctgaccaaatccagc
cccagcatggcagttctctacattcaggctttcgttttggtttttctcctgggcaaattc
atgggcaaagtgtttttcggccagctccgagcagcagaaatggagcacctactggagaga
tcatggtatgcagtcacagaaacttgtctggccttcaccgtcttcagagatgacttcagt
ccccgcttcgtggccctcttcaccctcctccttttcctcaagtgcttccactggcttgct
gaggaccgggtggactttatggagaggagtccaaacatctcctggctctttcattttcgc
ataatctctctgatgcttttgttgggtgtcctggatttcctatttgtcagccacgcctat
cacagcatcctcacccggggagcctctgtccagctagtctttgggtttgagtatgccatc
ctcatgactatggtactcaccatcttcataaaatacattctacattcggtcgacctgcag
agtgagaatccgtgggacaacaaagctgtctacatgttatacacagagctcttcacaggc
ttcattaaagtgctgctgtacatggcctttatgaccatcatgatcaaagtgcacactttc
cctctctttgccatccggcccatgtacctggccatgagacagttcaagcgagctgtgact
gatgccatcatgtcgcgccgtgccattcgcaacatgaacacgctataccctgatgccact
ccagaagagcttcaggccatggataacgtgtgtattatctgccgggaggagatggtgaca
ggggctaaacgtctgccatgcaaccacatattccacaccagctgtttgcgttcgtggttc
cagcggcagcagacctgccccacctgccgcatggacgtcctccgcacttccctccctgct
cagtcccagacgccagctgagcaacaggagcaagcgcagcagcagcagccccagcctcac
cagactccgctgattcctcagccacctaactttcctcaaggaatcctgcccccatttcct
cctgggatgttccctctctggcctcccctaggtccatttcctccagtgcctggtgtccag
ccacccaataatgctgaaaatccctctgctgttcccagtgcaccctccacttcaggcggt
cagacaacagcaagtacttcaagacctggtggtggttcagcttctggatcggatactgcc
cctgtgggaacagtgcctggctttcccttccctcctccatggatgggaatgccgttgcca
cctctctttggcttccctcccatgcctgtgccacctgcagggtttgctgggttgacagat
gaagagctgcgcgccatggaaggccatgaccggcaacacctggaagccaggcttcagtgc
ctgcagaacatccacacactcttagatgcagccatgttacagataaaccagtatcttact
gttctggcaactattgggtcaccccgtcctacacagctgccaagctccttaaatacttca
gcctcctctcaagagacacctgccaatgaatctactactttcaattcacccgacagtaca
tcttccccagggacatctccagcaatggaaccagactcgacaggccaaacagatctatct
ggattggtgggtgcagagggatacacagcaccagctgggcatgaggaaggagaggagcag
cctttaccaggagagcctgacacagctgagcttcggaggcgccggcttcagaaactggaa
tcctctcccccttcccattga
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