Carettochelys insculpta (pitted-shelled turtle): 142019479
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Entry
142019479 CDS
T11194
Symbol
NEO1
Name
(RefSeq) neogenin isoform X1
KO
K06766
neogenin
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Pathway
ciz04350
TGF-beta signaling pathway
ciz04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
142019479 (NEO1)
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
142019479 (NEO1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ciz04515
]
142019479 (NEO1)
Cell adhesion molecules [BR:
ciz04515
]
Immunoglobulin superfamily
DCC/UNC5 family
142019479 (NEO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neogenin_C
fn3
I-set
Ig_3
Ig_2
Pur_ac_phosph_N
ig
Fn3_VIN3
FN3_DSCAM-DSCAML_C
V-set
Interfer-bind
C2-set_2
Tissue_fac
fn3_2
DUF4998
TMEM154
TM_ErbB1
EphA2_TM
Neur_chan_memb
FAM176
Herpes_UL74
Motif
Other DBs
NCBI-GeneID:
142019479
NCBI-ProteinID:
XP_074862549
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All DBs
Position
12:complement(1492198..1892314)
Genome browser
AA seq
1472 aa
AA seq
DB search
MAARGAWRLLGSLWLALLLGRPGAAGAAARSSPHGPAGSAVRTFTPFYFLVEPVDTLSVR
GASVILNCSAYCEPSPKIEWKKDGTFLNLVSDDRRQLLPDGSLLINSVLHSKHNKPDEGY
YQCVATVESLGTIVSRTAKLTVAGLPRFASQPESTSVYRGNSVILNCEVNADLVPFVRWE
QDRQPLFLDDRAIILPTGALIISNATDKDGGLYRCVMESGGSPKYSDEAELKVLPDPDVP
LSLMFLRQPSSRTKVTGQTAVFPCVTAGFPTPVTRWTKNEEEFVREGSERFLLLAGGTLQ
ISDITEDDAGTYACIVDNGNETIEAQADLTVQAPPEFLKQPANIYAHESMDIVFECEVTG
KPTPTVKWVKNGDMVIPSDYFKIVKEHNLQVLGLVKSDEGFYQCIAENDVGNAQAGAQLI
ILEHDVAIPTLPPTSLTSATTDHLAPATTGPLPSAPRDVVASLVSTRFIKLTWRTPASDP
YGDNLTYTVFYTKEGINRERVENTSRPGEMQVTIQNLMPETVYVFRVVAQNKHGPGESSV
PLKVATQPEVQLPGPAPNIRAYANSPTSVTVTWDTPLSGNGEIQNYKLYYMEKGKDNEQD
VDVGGHSYTINGLKKYTEYSFRVVAYNKHGPGVSTQDVAVQTLPDVPSAAPQNLSLEVRN
SKSIMIHWQPPPAGTHNGQITGYKIRYRKASRKSDVTESIGGTQLFQLVEGLERGTEYSF
RVAALTSNGTGPATDWISAETFESDLDETRVPEVPSSLHVRPLVTSIVVSWTPPENQNIV
VRGYAIGYGIGSPHAQTIKVDYKQRYYTIENLDPSSHYVITLKAFNNVGEGIPLYESAVT
RPHTDTSEVDLFVINAPYTPVPDPSPMMPPVGVQASILSHDTIRITWADNSLPKNQKITD
ARYYTVRWKTNIPANTKYKMANTTTLSYLVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHG
TTFELVPTSPPKDVTVVSKEGKPRTIIVNWQPPSEANGKITGYIIYYSTDVNAEIHDWVI
EPVVGNRLTHQIQELTLDTPYYFKIQARNSKGMGPMSEAVQFRTPKAESSDKMPNDQALG
STGKGSRPLDIGPDYKPPMSGSNSPHGSPTSPLDSNMLLVIIVSVGVITIVIVVIVAVFC
TRRTTSHQKKKRAACKSVNGSHKYKGNSKDVKPPDLWIHHERLELKPIDKSPDPNPIMTD
TPIPRNSQDITPVDNSMDSNIHQRRNSYRGHESEDSMSTLAGRRGMRPKMMMPFDAQPPQ
PVISAHPIHSLDNPHHHFHSGSLASPTRSYLHHQVNPWPTGTSMSHSDRANSTESVRNTP
STDTMPASSSQTCCTDHQDPESATASYLANSQEEETGPSLPTAHVRPSHPLKSFAVPAVP
PPGSTYDPALPSTPLLSQQASGHPVHSVKTASIGTLGRTRPPMPVIVPSAPDVPETTRML
EDSESNYEPDELTKEMAHLEGLMKDLNAITTA
NT seq
4419 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcggggcgcctggcgcctgctcggctccctctggctcgcgctactgctgggg
cggccgggggcggccggcgctgccgccaggagcagcccgcacggccccgcaggatctgct
gtgagaactttcactccattttattttctggtggagccggtggacactttatcagttcga
ggggcttctgtcatactgaactgttcagcttactgtgagccttctcctaaaattgaatgg
aagaaagatgggactttcctaaatttggtatcagatgaccggcgccagctgctaccagat
ggatctttattaataaatagtgtgttgcattccaaacacaataaacctgatgaaggatat
tatcaatgtgtggcaactgtggaaagccttgggaccattgtaagcagaacagcaaagctt
acagtagcaggacttccaaggtttgccagtcagccagaatcaacatctgtctatagagga
aacagcgtcattctgaactgtgaggtcaatgctgatctagtaccatttgtaaggtgggag
caagatcgccagccactgttcttggatgaccgtgcaatcatactaccaactggagcgcta
atcattagcaatgctacagataaagatggaggactctatcgctgtgtcatggaaagtggt
gggtctcccaaatacagtgatgaagcagaacttaaagtactcccagatccagatgttcca
ttaagcttgatgtttctgagacaaccttcatcacgaaccaaagttactggtcaaactgca
gttttcccatgtgtcactgcaggatttccaactccagttaccaggtggacaaaaaatgaa
gaagaatttgtcagagaaggctctgaaagatttctgttgctggcgggagggaccctacag
atcagtgatatcacagaagatgatgctgggacatatgcctgcattgtggataatgggaat
gaaacaattgaagctcaagcagatcttacagttcaagccccacctgaatttctgaagcag
cctgctaatatttatgctcatgaatctatggatattgtctttgagtgcgaagtgactggg
aagccaactccaaccgtgaaatgggtcaagaatggagacatggtgatacctagtgattat
ttcaaaattgtaaaggagcataatctgcaggttttgggtcttgtgaaatcagatgaagga
ttctatcagtgcattgcagaaaacgatgttggaaatgcacaggctggagcccaacttatt
atacttgaacatgatgttgccatcccaacattacctcccacttcactgaccagtgccact
actgaccatctagcaccagctacaactggaccactgccttcagccccccgggatgtcgtg
gcctcacttgtttctactcgcttcatcaaactgacgtggcggacacctgcatcagatcct
tacggagacaacctcacctatacagtgttctacaccaaggaaggtatcaacagggaacgt
gttgaaaatacaagtcgccctggagagatgcaagtgacaatccaaaacctgatgccagag
acagtgtatgttttcagagttgtggctcaaaacaaacatggccctggagagagctcagta
ccattgaaggtggcaactcagcctgaagttcagcttcctggtccagcaccgaacattcga
gcatatgctaattcacccacttcagtgactgtcacatgggacacaccattgtcaggcaat
ggtgaaatccaaaattacaagctgtattacatggaaaaggggaaagataatgaacaggat
gttgatgttggaggacattcctacaccattaatggattaaagaagtatacggagtacagc
ttccgagtggtcgcctataacaaacacggccctggagtctctacccaagatgtcgctgtg
cagactctgccagacgtccccagtgctgcacctcagaacctgtcactggaagtgcggaat
tccaagagcatcatgatacattggcagccccctcctgcaggcacgcacaatggtcaaatc
actggctacaaaattcgctaccgtaaagcatctcgtaaaagtgatgtaaccgagagcatt
ggtgggacacaactttttcagctagttgaaggtcttgagcgaggtacagaatatagtttt
cgtgtggctgccttaacaagcaatggtactgggccagctactgactggatatcagcagaa
acttttgaaagtgatctagatgaaacacgtgttcctgaagttccaagctccctacatgtt
aggccgcttgttacaagcattgtagtgagctggactcctcctgagaaccagaatattgtg
gtaagaggctatgctattgggtatggcattggcagtcctcatgcacagaccatcaaggtg
gactacaaacagcgctattacaccattgagaacttggatccaagttcccactatgttata
actctgaaagcatttaataatgttggagaaggaatcccactctatgaaagtgcagtgacc
aggcctcacacagacacttctgaagttgatttatttgttattaatgctccatacactcca
gtgccagatccctcccccatgatgccaccggtgggagttcaggcttccattctgagccat
gacaccataaggatcacttgggcagacaactcgctgccgaagaatcagaagataacagat
gctcggtactacacagtccgctggaaaaccaacattcctgcaaacacaaaatacaagatg
gcaaacacaaccaccttgagctatttagtgactggtttaaagcccaacaccttgtatgag
ttctctgtgatggtgactaaaggtcgaagatcaagtacttggagtatgacagcacatgga
actacttttgaattagttcctacctctccgccaaaggatgtgactgtggtgagcaaagag
ggaaaaccgaggaccataattgtaaactggcagcctccatctgaagcaaatggcaaaatt
acaggatacatcatttactacagcacagatgtgaatgctgagatacatgactgggtcatc
gagcctgtggtgggaaacagattgacacaccagatccaagagttaaccctggatacgcct
tattatttcaaaatccaggcccgcaactccaagggcatggggcctatgtcggaggcagta
cagttcagaacaccaaaagctgaatcctcagataaaatgcctaatgatcaagcattagga
tctacaggaaaaggaagtcggcctttggatataggacctgactacaaaccacccatgagc
ggcagtaacagtcctcatggaagccctacatcccctctggatagcaacatgcttctagtc
ataatagtatctgttggagtgatcaccattgtgatagtggtgattgttgctgtcttctgc
actcgtcgtaccacctcgcaccagaaaaagaaacgagctgcctgcaaatccgtgaatggg
tcccataaatacaaaggaaattccaaggacgtcaaacctcctgacctttggatccatcat
gagagactggagctgaaacccattgataaatctccagaccctaacccaatcatgaccgac
accccaatccctcgaaactcccaggacatcacgccagttgataattccatggatagcaat
atccatcagaggcgcaactcatacagggggcatgagtcagaagatagcatgtccacattg
gcaggaagaagggggatgaggccgaaaatgatgatgccgtttgatgctcagcctcctcag
cctgtgattagcgcccatcccatccattctctcgataaccctcaccatcatttccactct
ggcagcctcgcttctccaactcgcagctatctccatcatcaggtcaacccttggccgact
ggcacatccatgtcccattcagacagggccaattccacagaatccgttcgaaatacacca
agcacagacaccatgccggcttcctcatctcagacatgttgtactgaccatcaagatcca
gaaagtgccacagcatcttatctagccaacagccaggaggaagagactggcccaagtctc
cctactgcccacgtccgtccctctcaccctctgaagagctttgcggtgccagcagttcca
ccccccggttccacatatgaccctgcgttgccgagtacaccgttactgtcacagcaagct
tccggccatccagttcactcagtgaagactgcatcaattgggactttagggagaactcga
ccacctatgccagtgattgtgcccagtgcccctgatgttccagagaccaccaggatgctg
gaggattcagaaagtaactatgaaccagatgagctgaccaaagagatggcccacctggaa
ggactaatgaaggaccttaatgccatcactacagcatga
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