Carettochelys insculpta (pitted-shelled turtle): 142019485
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Entry
142019485 CDS
T11194
Symbol
MYO5C
Name
(RefSeq) unconventional myosin-Vc isoform X1
KO
K10357
myosin V
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Pathway
ciz04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
142019485 (MYO5C)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ciz03019
]
142019485 (MYO5C)
04131 Membrane trafficking [BR:
ciz04131
]
142019485 (MYO5C)
03029 Mitochondrial biogenesis [BR:
ciz03029
]
142019485 (MYO5C)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ciz04812
]
142019485 (MYO5C)
Messenger RNA biogenesis [BR:
ciz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
142019485 (MYO5C)
mRNA cycle factors
P-body specific factors
142019485 (MYO5C)
Membrane trafficking [BR:
ciz04131
]
Others
Actin-binding proteins
Myosins
142019485 (MYO5C)
Mitochondrial biogenesis [BR:
ciz03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
142019485 (MYO5C)
Cytoskeleton proteins [BR:
ciz04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
142019485 (MYO5C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
AAA_16
NPHP3_N
AAA_22
Motif
Other DBs
NCBI-GeneID:
142019485
NCBI-ProteinID:
XP_074862566
LinkDB
All DBs
Position
12:22063406..22132201
Genome browser
AA seq
1740 aa
AA seq
DB search
MALAELYTQYNRVWIPDSEEVWQSAEITKNYTTGDRVLHLLLEDGTELTYPVDPAPLPPL
RNPDILVGENDLTALSYLHEPAVLHNLKVRFVESKLIYTYSGIILVAMNPYKELPIYGDA
IIHAYSGQNMGDMDPHIFAVAEEAYKQMARNNKNQSVIVSGESGAGKTVSARYAMRYFAT
VSKSNSNTHMEDRVLASNPITEAVGNAKTTRNDNSSRFGKYTEISFDQRHQIIGANMRTY
LLEKSRVVFQSENERNYHIFYQLCASALQPEFKHLKLGHAEEFNYTKMGGSTVIEGVDDR
ADMMETQKTFALLGLKEDFQMDIFKILAAILHLGNVQITAVGDEKSSVSPKDKHLSIFCE
LMDLDSDGVAQWLCHRKIITTSETVIKPMTKLQALNARDALAKKIYSHLFDFIVERINSA
LHFSGKQHTFIGVLDIYGFETFDVNSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKEDI
PWTLIDFYDNQPVIDLIEAKMGILELLDEECLLPQGTDENWLQKLYNNYVNKNPLFQKPK
MSNTSFVIQHFADKVEYKSEGFLEKNRDTVYEVLIEILRNSKFQLCASFFQDQQVLSSPF
KPSIKVKSAKTLVKPPNKQFRTTVGSKFRSSLYLLMETLNATTPHYVRCIKPNDEKLPFE
FDSKRVVQQLRACGVLETIRISAQSYPSRWTYLEFFSRYSILMTQRELSLSDKREICRTV
LQRLIQDPNQYELGRTKIFFRAGQVAYLEKLRLDKLRQACIMIQKNVRGWCQRKKFFRIK
QAAVTIQQYFRGQRAVRQAITATALKQAWAAIVIQKYTRGYLVRKLCKLIRVAVITIQAY
VRGFLARKKFRKMLKEHKAVILQKYARAWLARRRFQNIRRFVVNIQLSYRVQRLQKKLEE
QSKENHGLLERLTNLASTHANDRDTIQKLEVELEKSVTQRRTSEEKGKKYKEDTEQKLSK
LEKLNAELQEQKTFLEQKLQEDTEEMKDKMDELTKQLLTDVQKEERQRIKLEKKFQNEKQ
DYEKEIESLKGEIKTLKEENINLQHQIQEEHRIQDGLKLEAGQLKKQAMMIPELQKEIEL
LQTQKMDVEKQVQSQKREMREKVSEVAKQFIESYDVEDVRSRLSMEDLEHLNEDGELWFA
YEGLKKATRVLESQFQSQKENYEKEIEALNFKVGHLSQEIIHLQKLFREENDINDSIQLQ
VSRLTSENMMIPDLKQQISELQKQKLDLEHRLQAQAAKTKEKMEEMPNQEHHSLSEEGQR
IQLEGQTEIHTQGEQQIVTVQEIQDTNNCLKKQHEIESEVKDKIKQEASHLAEENMDLEE
QLDMKNRVIKRLQDQIKTLSKTVEKANETHVPAPPKEYVGMLEYRKEDEARIIQNLILDL
KPRGVVVNMIPDLPAHILFMCVRYADYLNDGDMVKSFMSITTNGVKQVIKEHAEDFEMLS
FWLSNTYNFLNCLKQYSGEEEFMKQNTPRQNMNCLKHFDLSEYRQILSDLAIRIYQQFII
VMENNIQPMIVPGMLEYESLQGISGLKPTGFRKRSSSIDDADTYTMTSILQQLSYFYSTM
CQNGLDPELLKQTVKQLFYLIGAVTLNSLFLRKDMCSCRKGMQIRCNISYLEEWLKEKNL
QSSSAKETLEPLSQAAWLLQVKKITDDDAKEIYERCTTLSAVQIVKILNSYTPIDDFEKR
VSPSFVRKVQTMLNNREDVPQLMLDTKYLFQVTFPYTPSPHALEMIQIPSSFKLGFLTRV
NT seq
5223 nt
NT seq
+upstream
nt +downstream
nt
atggcgctggccgagctctacacgcagtacaacagagtttggatccctgacagcgaagaa
gtttggcagtctgctgaaatcacaaagaactacacaacaggagaccgcgtgcttcactta
ctcttagaagacggaactgaattgacttaccctgtagatccagcccctttgcctccttta
cgaaatcctgacatactggttggtgaaaatgacctcactgcacttagctatcttcatgag
cctgctgttctacacaatcttaaagttcgttttgtggagtcaaaactcatctacacttac
agcggaatcattttggttgcaatgaacccctataaagagttgccaatatacggggatgct
attatccatgcatatagcgggcagaacatgggggatatggatccacatatatttgctgtg
gcagaagaggcttacaagcaaatggcaagaaacaacaagaatcagtctgttatagtcagt
ggagaatcaggagctggaaaaactgtgtctgctagatatgctatgagatactttgccacg
gtcagtaagtccaacagcaacacacatatggaggatagagtgttggcctccaacccaata
acggaggctgtaggcaatgcgaaaaccacacgcaatgataatagcagtcgttttgggaaa
tacactgaaatcagtttcgaccagagacaccaaatcattggagccaacatgaggacatat
ctgcttgagaaatccagagttgtctttcaatcagagaatgaacgaaattaccacatattc
taccagctgtgcgcttctgctctgcaaccagaatttaagcatcttaaattagggcatgcg
gaagaatttaattatacaaaaatgggtggcagcactgttattgaaggagtggatgacaga
gcagacatgatggagacacagaagacattcgctctactaggtctgaaggaggattttcag
atggatatttttaaaatcctggcggccatcctacacttaggcaatgtgcaaataacagcg
gtcggtgatgaaaagtcttcagtcagcccgaaggacaaacacctcagtatattctgtgaa
cttatggatttagacagtgacggagtggcacagtggttgtgccaccgaaaaattatcacc
acctcagagacggtcataaagcccatgacaaaactccaggctcttaatgcaagggatgct
ttggccaagaagatctattctcacctgtttgatttcattgtggaaagaattaacagcgct
ttgcatttttctggaaagcagcacacttttattggtgttttggacatttatggatttgaa
acttttgatgtgaacagctttgaacagttttgcatcaattatgccaatgaaaaactgcaa
cagcaatttaacctgcatgtctttaaacttgaacaagaggagtatatgaaggaagacatc
ccatggactctaatagacttttatgacaaccaaccagtcattgaccttattgaagctaaa
atgggcattttagagctgctagatgaagagtgcttgttacctcaggggacagatgaaaat
tggctccaaaaactctataataattacgtcaacaagaacccgctctttcaaaagcccaaa
atgtcaaacacgtcttttgtcatccagcactttgctgataaggtagagtacaaatctgaa
ggatttctggaaaaaaacagagatacggtatatgaagtattgattgaaattttgagaaac
agcaagtttcaactgtgtgcaagcttttttcaagaccaacaagtgctcagttcaccattc
aagccatctataaaagtcaaatctgcaaaaactctggtgaagccacctaacaaacagttc
cggacaacagttggcagtaagttccgcagttctttatatttgcttatggagacacttaat
gccactactcctcactatgtacgatgcataaagccaaatgacgagaaattgccattcgag
tttgactcaaagagggtggtgcagcaactgcgagcatgtggtgttttggaaactattcga
attagtgcacagagctatccctctaggtggacatacctcgagtttttcagccgttacagc
attctcatgacgcagcgtgagctctctttaagtgacaagagagagatttgcaggactgtt
ttgcagaggttaatccaggaccctaaccagtatgagcttgggagaacaaaaattttcttc
agagcagggcaggttgcttatttggaaaaactgcggttggataaattgagacaagcgtgc
atcatgatccaaaagaacgtccgaggctggtgtcaacggaagaaattcttccgcatcaaa
caagcagctgtgacaatacagcagtacttccgcggacagcgggctgtacgacaagctatt
actgctacagctctaaagcaagcctgggctgctatagttattcagaagtacactcgggga
tatctagtccgtaaactttgcaagctgatccgtgtggctgttataacaattcaagcttat
gtgcgtggatttctagcaaggaagaaattccgaaagatgctcaaggagcataaggctgtc
atccttcagaaatatgcccgtgcttggcttgcaagacgcagatttcagaatattcggcgg
tttgtagtgaatattcagctttcatacagagttcaacgactgcagaagaaattagaagag
cagagcaaagaaaatcatggcttactggagagactgactaacctggcttcaactcatgcg
aatgaccgagatacaatccagaaacttgaagtagagcttgaaaaatcagtgacacaaagg
agaacttctgaggaaaaagggaagaaatacaaggaggacactgaacagaaactctcaaaa
cttgagaaactgaatgcggaactgcaagaacagaaaacattcttagaacagaagctccaa
gaggacaccgaggaaatgaaagataaaatggatgagctcacaaaacaactgcttacagat
gtacagaaagaagaaagacaaagaataaaactcgagaaaaagttccaaaatgagaagcaa
gactatgaaaaagagattgagtcattaaagggagaaattaaaactctcaaggaagagaat
attaatctgcaacatcaaattcaggaagaacaccgcattcaggatggcttaaaactggaa
gcaggacaacttaaaaagcaggccatgatgatacctgaattgcaaaaggaaattgaactg
cttcaaacacagaaaatggatgtggaaaagcaggtccaatcccagaagcgagaaatgaga
gaaaaggtgtcagaagttgcaaaacaatttattgagagctatgatgttgaggatgtaaga
agcagactgtccatggaagatttggaacatttgaatgaggatggagaactttggtttgct
tatgagggcctgaaaaaagccacaagagtgttggaaagccaattccagtctcagaaagag
aactatgaaaaggagattgaagctctgaacttcaaagttgggcatcttagtcaagaaatt
atccatttacagaagttgtttagggaggaaaatgacataaatgacagcatccagcttcaa
gttagtagacttacatcagaaaacatgatgatcccagatcttaaacagcagatttctgaa
cttcagaagcaaaagttggatcttgaacaccgccttcaagcacaagctgcaaagacgaaa
gaaaaaatggaagaaatgcctaatcaggagcatcacagcttgtcagaagaaggccaaaga
atacaactggaaggccagactgaaatacacacacaaggagagcagcagattgtcacagtc
caagaaattcaagacacaaacaactgcttaaagaagcaacatgaaattgagtctgaagta
aaggacaagataaagcaggaggcttctcatcttgctgaggaaaacatggatcttgaagaa
cagctagacatgaaaaacagagtaataaaaagactgcaggatcagatcaagactctttcc
aagactgttgaaaaagccaatgaaacacatgtgccagctcctcctaaagaatacgttgga
atgctggagtatagaaaggaagatgaagcaagaattattcaaaatctgatccttgatcta
aagccacgtggagtggtagtaaatatgattccagacctaccagctcacatcctgttcatg
tgtgtgagatacgcagattatctgaatgatggggacatggtgaaatctttcatgagtata
accactaatggtgtcaaacaagttattaaggaacatgctgaagattttgagatgttgtcg
ttttggctttccaatacatataattttcttaactgtttgaaacaatacagcggagaagag
gagtttatgaagcaaaatactccacgtcagaatatgaactgcttgaagcactttgatctt
tcagaatacagacaaattcttagtgacttggccatccgtatctatcagcagttcattatt
gtaatggagaataacattcagcccatgatagtcccaggcatgctagaatatgaaagtctc
caaggaatttctggcttgaaacctaccggtttccgtaaacgttcttccagtatcgatgac
gcagatacctacacaatgacctccatcctgcaacagctcagctatttttatagcacaatg
tgccagaatggcttggacccagaacttctaaagcagacagtgaagcagcttttctatctg
attggagctgtcacccttaatagtcttttcctccgcaaggacatgtgctcttgtaggaaa
ggaatgcagataagatgtaatatcagctacttagaagaatggctgaaagaaaagaacctg
cagagcagttctgccaaggaaactttggaacctctctctcaggcagcttggctccttcag
gtcaaaaagatcacagatgacgatgccaaggaaatatacgaacgctgtactaccctgtct
gctgtgcagatagtaaagatcctcaattcctacactccaatagatgattttgagaaaaga
gtgtccccgtcgtttgttcgtaaagtccagactatgctgaataatcgagaggatgttcca
caattaatgctggataccaaatatctctttcaagtgacatttccctacacgccatctcca
catgccttggaaatgatacaaatccccagcagtttcaaacttggctttctcacaagagtg
taa
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