Carettochelys insculpta (pitted-shelled turtle): 142019543
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Entry
142019543 CDS
T11194
Symbol
ACAN
Name
(RefSeq) aggrecan core protein
KO
K06792
aggrecan 1
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ciz00535
]
142019543 (ACAN)
00536 Glycosaminoglycan binding proteins [BR:
ciz00536
]
142019543 (ACAN)
04091 Lectins [BR:
ciz04091
]
142019543 (ACAN)
Proteoglycans [BR:
ciz00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
142019543 (ACAN)
Glycosaminoglycan binding proteins [BR:
ciz00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
142019543 (ACAN)
Lectins [BR:
ciz04091
]
C-Type lectins
Lecticans
142019543 (ACAN)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Xlink
Lectin_C
V-set
Sushi
EGF
hEGF
EGF_TEN
EGF_CA
I-set
Ig_3
EGF_2
EGF_3
FXa_inhibition
Motif
Other DBs
NCBI-GeneID:
142019543
NCBI-ProteinID:
XP_074862686
LinkDB
All DBs
Position
12
Genome browser
AA seq
1812 aa
AA seq
DB search
MTTLLLVFVCLRVITAAISVEVSDHGNTLSVSIPEQSPLRVVLGSSLTIPCYFIDSLDHV
TTAPYTPPLTPRIKWSRLSNGKEVVLLVATEGHVRINTEYKEVISLPNYPAIPTDATLEI
KALRSNDTGIYRCEVMHGIEDSQDTIDVVVKGVVFHYRAISSRYTLDFEKAKQACIQNNA
VIATPEQLQAAFDDGFDQCDAGWLADQTVRYPMHHPREGCYGDKDIFPGVRTYGIRETNE
TYDVYCYAEEMQGEVFYATSPEKFTFQEAAVMCLNLGARLATTGELYLAWKGGMDVCSAG
WLADRSVRYPISKARPNCGGNLVGVRTVYLHDNQTGYPDPHSRYGAICYTDEDFLVSENF
TVQTVTESEVEITFPYNVTEEEARGSIATLEPMNITSTGSELYEGFTVTPDLFATGVTAE
TAFTDADNVTEEAVTAVGVTPEEVTTLALETLFTSEPPEVSSATEDLGVTAMPELESASI
EEIIVQVTAAPDSGLVPEKPISPTGVVFHYRPATNRYSLTFSKAQQACLDNNAVIATPEQ
LQAAYETGFDQCDAGWLRDQTVRYPIVTPRNKCVGDKDSSPGVRTYGMRPASEMYDVYCY
IDRLKGEVFFATQPDEFTFPEAQAYCESQNATLASVGQLHAAWKLGLDRCRAGWLADGSI
RYPIVTPRPACGGDKPGVRTIYLYPNQTGFPDPLSRHHAFCFRALPALEDLEEVTLFFVE
EQIVTQVIPGVEEVPSGEETTVETEFATEPENRTEWGTQVFPTDISLLSVSPSAFPPLRA
ITDEPSAETSVSGEPSGEISVSGVPETSGEPSASGWITGESASGTFEPSGEPSGISGMPS
VDLDFSGLPSGLPSGDESGLPSDIISGLSSGEEDLSASGIPDLSGITSGLQEFSGIPEIS
GLPSGEVSGGEPVSGLPSGEYDESGLPSGFPNVSLVDTSLVEVVTTVAERQMEGKGTIGV
SGEGDLSGLPSTEWDISGKISGVPSGVDFSGAPSGIPDISGAPSGVPDISGLPSGIDLIG
APSGVPDISGLVDLSGLVSGVDISGEASGITFFNASLVEVTIPSVTEAEAKKFLEISGLP
SGDEDVSGTASGILDVSGQPSGHIDFSGGVSGAPDMSGLPSGVIEMSREISSVEVGSGLP
SGVYDYSGLPSGFPTVSLVDTTLMEVVTLTSVAQELGEGPSAMLEISGLPSGERETSGKV
SGVTDVGGLPSATVDISGQPSGIPYFSGEISGVTDLSGESSAVTGTSEEASGLPEVTLVT
SDLVEVVTKPTISQELGGETAVTLPHTFESSVDDSASGEIGRETSAFPEITVEISGFHET
SLEESTAPDSNGDTSILPIISIEISTVQETSGEISAIPEISIETSTAHETSDKISALPEI
SIETSTVYKTRRETSVMPEVHIETSGTAVVSGESSGAPEERRGDSSGSPTYPPPDVSGET
SAPGVVISTSMPDAELTRESLGPEEARLETQSSTPMVSEQETKVSVVLETVQISPTATAI
LPQVSPEATNVPKPTAEAIPKTCDDKPCGAGTCHERDGNITCLCPPGYMGDHCAIDIDEC
HSSPCLNGATCTDGIDSFKCLCLPSYGGDLCEIDLEDCDEGWTKFQGHCYKHFEQKETWV
EAETKCREHQSHLSSIITPEEQEFLNNYARDYQWIGLSDRAIEHDFRWSDGHSLQYENWR
PNQPDNFFAREEDCVVMIWHEQGEWNDVPCNYHLPFTCKKGTVACGDPPVVENARTFGRK
KDRYEINSMVRYQCNQGYIQRHVPTIRCQPNGHWEEPRIACIDPTLYKRRLHKRSPRNRS
RTNARAAQTPAH
NT seq
5439 nt
NT seq
+upstream
nt +downstream
nt
atgaccactttactattagtgtttgtgtgtttgcgagtcatcactgcagccatctctgtg
gaagtctcagatcatggtaacacactgagcgtgagcatacctgaacagtctcccctgcgt
gttgttctgggaagctctctgaccatcccctgctacttcattgactcattggatcacgtc
accacagccccctatactcctcccctgaccccaagaatcaaatggagcagactctccaat
gggaaggaagtcgtcttactagtggccacagaggggcacgttcgaatcaacactgagtac
aaggaggtgatctctctgcccaactatcctgccatccccaccgatgccaccttggaaatc
aaagcgctgaggtccaatgacactgggatctatcgctgtgaggtgatgcatgggattgaa
gacagccaggatacaatagacgttgtagtgaaaggcgtcgtgttccattacagagccatc
tccagcaggtacactttggactttgagaaggcaaagcaggcatgtatccagaacaatgct
gtcatcgctacccctgaacagctgcaggctgcctttgatgatgggtttgatcagtgtgat
gccggctggctggctgatcagactgtcaggtacccaatgcaccatccccgagagggttgc
tatggtgacaaggacatatttcctggcgtgaggacctatggtattcgggagacaaatgaa
acctacgatgtttattgttatgcagaggagatgcaaggtgaagtcttctatgccacctcc
ccggagaaattcaccttccaggaagctgcagtgatgtgcctgaatcttggagcccgtttg
gccaccacaggagagctgtacctggcgtggaagggtggaatggatgtgtgcagtgcaggt
tggctggcagaccgcagcgttaggtatcccatatccaaggcacgtcccaactgtggcggg
aatttggtaggggtacggacggtgtacctccatgacaatcagacggggtaccctgacccc
cattcacgctatggtgcaatctgctatacagatgaggactttttagtctccgagaacttc
accgtccagactgtcactgagtccgaagttgagataactttcccatataacgtcacggag
gaggaagcccgaggcagcattgcaacgctagagccaatgaacatcacgtccaccgggtca
gagctatatgaaggcttcacggtgactccagatctctttgccactggtgtcactgccgag
acagctttcactgacgcagacaacgtgactgaagaggcagtcacagctgtaggggtgact
ccagaagaggtcaccacgttggccctggagactcttttcaccagtgagccaccggaggtg
agctcagcaacagaggacttgggggtgactgccatgccagagctagaatctgcctccatt
gaagagataattgtgcaggtgacagctgctcctgacagcggtcttgttccggagaaaccc
atttctcccactggtgtcgtatttcattaccgaccagccaccaacaggtattccctcacc
ttcagcaaagcccagcaggcttgcctggacaacaacgctgtcattgccacacctgaacag
ctgcaggctgcctatgagactggctttgatcagtgtgacgctggctggctgagggaccag
actgtcagataccccattgtgaccccacgaaataaatgtgtaggagacaaggacagctcc
ccaggcgtgcggacgtatggcatgcgcccggcttctgagatgtacgacgtgtactgctac
atagatagactaaagggcgaggtgttctttgcgacccagccagacgaattcaccttccca
gaagcccaggcatactgtgagagccaaaatgctaccctggcctctgttgggcaacttcac
gccgcctggaagctgggcctggatagatgccgtgctggctggcttgcggatggcagcatc
cggtatcccattgtgaccccacgtcctgcttgcgggggagacaaacctggcgtgagaacc
atctacttgtaccccaaccagacaggattccctgacccactgtcaaggcaccatgcattc
tgtttccgagccctgccagctctggaagatcttgaagaggtcaccttgttctttgttgag
gagcaaattgtaacccaggtgatccctggagtggaagaagtaccttctggggaggagaca
actgtggaaacagaatttgccactgaacctgaaaatcggacagagtggggaacacaggtc
tttccaactgacatttccttgctatcagtgagtccatcagctttccctccacttagagca
ataacagatgaaccaagtgcagagacttctgtcagtggagagccttcaggggagatatct
gtgtctggagtacctgaaaccagcggtgaaccatcagcttctgggtggataactggagaa
tcagcttctggaacatttgaacctagcggagagccctcggggataagcggaatgccatct
gtagacctggatttcagtggacttccatctggattgccatcaggggatgagagtgggcta
ccctcagatattatcagtgggttatcctctggcgaggaagacctatctgcttccggaatc
ccagaccttagtggaataacatctggactgcaagaattcagtggaattccagaaatcagt
gggctgccttctggagaagtctctgggggtgagcctgtaagtggcctgccatctggagag
tatgatgaaagtggactcccatctgggtttccaaatgtgtctcttgtggatacctctttg
gtggaagttgtaacaacagtagcagaaaggcaaatggaagggaaaggaacaattggggtc
agtggagaaggagacctatcagggttaccctccactgaatgggacattagtggaaaaatc
agtggggtgccctcaggagttgatttcagtggagcaccatctgggatacctgatatcagt
ggagcaccatctggtgtacctgatatcagcgggttaccctctggaatcgatctcattgga
gccccatctggggtacctgacataagtggccttgtagacttaagtggcctagtttctggt
gttgatattagtggtgaggcctcgggcataacttttttcaatgccagtttggttgaagtg
acaatcccgtctgttacagaagcagaagcaaaaaagtttctggaaatcagtggattgccg
tctggagatgaagatgtatcaggcacagcatctggcattttagatgttagtggtcagcct
tctgggcatatagacttcagtggaggggtttctggggctcctgacatgagtggacttcca
agtggagtaattgaaatgagcagagaaatttccagtgttgaggttggtagtggcctgcca
tctggagtttatgattatagtggactcccctctggttttcccactgtatctcttgtggat
acaactttaatggaagttgtaacactgacctcagttgcacaagagctaggtgaagggcca
tctgcaatgttagaaatcagtggtcttccttcaggggaaagagaaacttctggaaaagta
tctggagttacagatgttggtgggttaccatcagcaacagtagacatcagtggacagcca
tcaggcatcccatatttcagtggagagatttctggagtcactgacttaagtggggaatct
tcagcagtgactggaaccagtgaggaggcctcaggacttccagaagtcaccttggtcact
tctgatttggtggaagttgtgacaaaaccaacaatttcacaggagctaggtggagaaaca
gctgtgacactgccccatacttttgagtcaagtgtggatgactctgcatctggggaaata
ggtagagagacttctgcatttcctgaaattactgtagaaatatctggatttcatgaaact
agcctagaagaatctacagctcctgacagtaatggtgacacatctatattgcctataatt
agcatagaaatttctacggttcaagaaaccagtggcgaaatatctgcaatacctgaaatt
agcatagagacttctacagcacatgaaactagtgacaaaatatctgcattgcctgaaatt
agcatagaaacttctaccgtttacaaaaccagaagggaaacatctgtaatgcccgaagtt
cacatagaaacatctggcacagctgtggtcagtggtgagtcttctggggcaccagaagaa
aggaggggagattcttcaggatcacccacatacccacctccagatgtttcaggggaaacc
tctgcaccaggtgttgtaattagtaccagtatgccagacgctgaattaacacgagaatcc
ctgggtcctgaagaggcccggcttgaaacacagtcctctactcccatggtatcagaacaa
gaaaccaaagtatctgttgttctagaaactgtacagatatcacccactgccactgctatc
ttgcctcaagtttcaccagaagccaccaatgtgccaaaacccactgcagaagctataccc
aagacatgtgatgacaagccctgtggagctggaacctgccatgaaagagatggaaatatc
acctgtttgtgcccacctgggtacatgggtgaccactgtgctatagacattgatgagtgc
cactcaagcccctgtctgaatggagctacctgcactgatggcatcgactctttcaaatgc
ttatgccttcccagctacggaggggacctgtgtgagatcgacctggaagactgtgatgaa
ggctggaccaagttccagggccattgttacaagcactttgaacagaaagagacgtgggtg
gaagctgagaccaagtgccgggaacatcagtcccacctgagcagtatcatcactccggaa
gaacaagagtttctgaacaactacgcacgcgattaccagtggatcggactgagtgacaga
gccattgaacatgacttccgctggtctgatggacactccctccaatatgagaactggcgg
cccaaccagcctgacaacttctttgccagagaagaggactgcgtggtgatgatctggcat
gagcaaggcgagtggaatgatgtcccatgcaactatcacctccctttcacatgcaagaaa
ggaacagtggcctgtggggaccctcctgtggtagagaatgccaggaccttcggaaggaag
aaggaccgatatgaaataaactccatggtacggtaccagtgtaaccagggctacatacag
cgccatgtgcccacaattcggtgccagcccaacggccactgggaggaaccgcggatagcc
tgcatagatcccaccctctacaaacgcagactacacaagaggagcccaaggaatcggtca
agaaccaatgccagagctgcacagacgcccgcccattag
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