Carettochelys insculpta (pitted-shelled turtle): 142019605
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Entry
142019605 CDS
T11194
Symbol
LRRC49
Name
(RefSeq) LOW QUALITY PROTEIN: leucine-rich repeat-containing protein 49
KO
K16606
leucine-rich repeat-containing protein 49
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ciz03037
]
142019605 (LRRC49)
04812 Cytoskeleton proteins [BR:
ciz04812
]
142019605 (LRRC49)
Cilium and associated proteins [BR:
ciz03037
]
Primary cilia and associated proteins
Tubulin polyglutamylase and associated proteins
142019605 (LRRC49)
Cytoskeleton proteins [BR:
ciz04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Tubulin modification proteins
Tubulin polyglutamylase complex components
142019605 (LRRC49)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_4
LRR_9
LRR_8
LRR_14
FTH
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
142019605
NCBI-ProteinID:
XP_074862831
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Position
12:15763701..15875835
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AA seq
778 aa
AA seq
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MATKERFPAPEAGGRGLGGRWGRLVSMVPSKCRPAGGRAGPSTGNNCGLQLVIQTSSVAE
RHKPFEFRINKDQSAFQNRLLQHDIEKNYSGKQGDGRLLNPLVRNKQVYVPVTANLADLS
GLELKQGTSCLSAFGESSAHTPTKSRIRQGCPSAGPNVSDNINSGSGSSITAFPILHRAA
DEKIVSSDRLTLERQKLTVCPVIDGEEHLRLLNFQHNFITRIQNISNLQHLVFLDLYDNQ
IEEISGLSTLRSLRVLLLGKNRIKKISNLENLKNLDVLDLHGNQITKIENINHLGELRVL
NLARNLLSYVENLNGLDSLTELNLRHNQITSLKDVDTLPCLQHLFLSFNNISSFDNILCL
AESSSLSDITLDGNPIAQETCYKNTILHHMMQLRQLDMKRITEEERRMASVAARKEEEKK
RESHKQALLKEKKRLTISNIARQWEIQQNRVVLVTTSNQDNKDSDSCQINGSAAYVFPEE
TRALDTVLSNAVQGLSVLDSHLVEVEGDTVYFYGSGALESLDRNWSVQTAGTVTTVSFTF
IEFDEIVQVLPKLKIRFPNSVHLKFKETNIVMLQQFNALAQVRRIEQLTVDPQGNPVVNF
TLWKYYVLFRLNHFNLQKINGIEVTQNDIVLAEKLFGILAYVASSELPQYRLLSLLGESR
KKQFCYMLESKGKKSGIISEESNDSRRVGGESAGCAVLNYTTKESHTEKLEEIKERKNFC
QTYIQDLVKEAADINMKNESLQKLWPQLFIELVRDAVIEIRNKNSYMKLCLQRITDQK
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atggcgactaaggagcggtttccggcgcccgaagcaggaggccgtgggctgggtggccgc
tgggggagactggtttccatggtgcccagcaagtgccggccggccggcggcagggccggg
cccagcactggtaacaactgtgggcttcagctggttatccaaacctcatcagtggcagag
agacataaaccatttgaattcaggataaataaagaccagtcagctttccaaaacaggctc
ttgcaacatgatattgaaaaaaactattcaggaaaacaaggagatggaagattattgaat
cctttggtgcgtaataagcaggtgtatgtcccagtaacagccaatctggcagacctttct
ggtctggaattgaaacaaggtacaagctgtctatcagcatttggggaatcttctgctcat
actcctacaaaatccagaatcagacaaggttgtcctagtgctggtccaaatgtttcagat
aacataaattctgggagcggttcatcaataacagcatttcccattctgcatcgtgctgct
gatgagaaaatagtgagttctgataggctgaccctggaaagacaaaaactgacagtttgt
ccagttattgatggggaagagcatcttcgcttgttgaacttccagcataactttataact
cggatccagaatatttctaatctgcagcatcttgttttcttagatttatatgataatcag
atagaggaaataagtgggctttcaactctgaggtctctgcgtgttctcctcttggggaag
aacagaattaaaaaaatctcaaatctggaaaacttgaaaaatcttgatgttttggatctt
catggaaatcagattactaaaatagaaaatatcaatcatttgggtgaactcagagtgtta
aaccttgccagaaacttattaagctatgtagaaaaccttaatggattggattcactgact
gaacttaaccttcgtcataatcaaatcacctccctgaaagatgtggatactttgccgtgc
ctccaacatctgtttctcagctttaacaatatatctagttttgacaacattctgtgcctt
gctgaatcctcatcgttgtctgatatcacccttgatggcaatccgatagctcaggagaca
tgttacaaaaacaccattctccatcatatgatgcagctccgacagctagatatgaagaga
atcacggaagaagaaaggcgcatggcatctgttgcagcaagaaaagaggaagagaagaag
cgtgaaagccataaacaagccttgctaaaggagaagaaacgattgacaattagcaacatt
gctcgccaatgggagattcagcagaatcgagttgtccttgtgaccacttcaaatcaagat
aataaagacagtgattcctgtcagattaatggcagtgctgcatatgtatttcctgaagaa
accagggctcttgatacagtactgagtaatgcagtacaaggcttatctgttcttgattct
cacttagtcgaagtggagggagacactgtttacttctatgggtctggagcgctggaatcc
ctggatcgaaactggagtgttcagacggctgggactgtcaccacagtctcctttacgttc
atagaatttgatgaaattgttcaagtgctaccaaaactgaaaatcagatttcctaattct
gtgcacctgaagtttaaggagactaatattgtcatgttgcaacagtttaatgcattagca
caggtgcgtcgcattgaacagttgaccgtagatcctcagggaaatccagttgtcaacttt
actctgtggaaatactatgtactgtttagactgaaccattttaatctgcagaagataaat
ggaattgaggttacacagaatgatatagtactggctgaaaagctctttggcattcttgca
tatgtagcatcttctgaattgccccagtatcgcctgctttcgttacttggagaatccagg
aaaaagcaattctgttatatgctagagtcaaaagggaaaaaatctgggatcatcagtgaa
gaaagtaatgacagcagaagagttggaggagaaagtgcaggttgcgctgtactgaattac
actacaaaggagtctcatacagaaaagcttgaggaaatcaaggagagaaagaacttttgc
cagacatacatacaagacttagtgaaagaagctgctgacatcaatatgaaaaatgagtct
ttacagaagctatggcctcagctgttcattgagcttgtcagggatgcggtgatagaaata
cgcaataaaaattcctacatgaaactctgcttacagcggatcactgatcaaaaatag
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