Carettochelys insculpta (pitted-shelled turtle): 142019612
Help
Entry
142019612 CDS
T11194
Symbol
SIN3A
Name
(RefSeq) paired amphipathic helix protein Sin3a isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Pathway
ciz04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
142019612 (SIN3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ciz03036
]
142019612 (SIN3A)
Chromosome and associated proteins [BR:
ciz03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
142019612 (SIN3A)
REST complex
142019612 (SIN3A)
Heterochromatin formation proteins
Other heterochromatin formation proteins
142019612 (SIN3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
HHD_RTEL1
Motif
Other DBs
NCBI-GeneID:
142019612
NCBI-ProteinID:
XP_074862842
LinkDB
All DBs
Position
12:complement(5614834..5678048)
Genome browser
AA seq
1278 aa
AA seq
DB search
MKRRLDEQESPVYASQQRRITSSTEAFPHRVLAPAPPVYEAVSETMQSATGIQYSVTPSY
QVSAVPQSSGSHGPAIATVHGGHHHTTPVQPHGSQVVPSHAHPTPPAAPVQGQQQFQRLK
VEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDLIMGF
NTFLPPGYKIEVQTNDMVNVTTPGQVHQIPTHGLQPQPQPQPQHPSQPSAQSTPTPAQPA
PQPPPAKISKPSQLQAHTPASQQTPPIPPYASPRSPPVQPHTPVTISLGATPSLQNNQPV
EFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVYAQV
ARLFKNQEDLLSEFGQFLPDANSSVLLSKTTAEKVESVRNDHGGTVKKPQLNNKQQRPNQ
NGCQIRRHSGTGAAPPVKKKPKLLGLKDQSLAEASKHGVGTESLFFEKVRKALRSTEAYE
NFLRCLVIFNQEVISRAELVQLVSPFLGKFPELFTWFKNFLGYKESVHMESFPKERATEG
IAMEIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKEVLNDTWVSFPSWSEDSTFVSSK
KTQYEEHIYRCEDERFELDVVLETNLATIRVLEAIQKKLSRLSAEEQAKFRLDNTLGGAS
EVIHRKALQRIYADKAADIIDGLRKNPSVAVPIVLKRLKMKEEEWREAQRGFNKVWREQN
EKYYLKSLDHQGINFKQNDTKVLRSKSLLNEIESIYDERQEQASEDNAGVPIGPHLSLAY
EDKQILEDAASLIIHHVKRQTGIQKEDKYKIKQIMYHFIPDLLFAQRGELSDVEEEEEEE
MDVDEATGAAKKHNGVGSSPPKAKLLFSNTAAQKLRGVDEAYNLFYVNNNWYIFMRLHQL
LCLRLLRICTQAERQIEEENREREWEREVLGIKRDKSDSPAIQLRLKEPMDIDVEDYYPA
FLDMVRNLLDGNMDSSQYEDSLREMFTIHAYIAFTMDKLIQSIVRQLQHIVSDEICVQVT
DLYLSENSNGATGGLLSSQSSRTLVEATYQRKAEQLMSDENCFKLMFIQSRGQVQLTIEL
LDTEEENSDDPVEAERWSDYVERYVNSDSTSPELREHLAQKPVFLPRDSLVYRNLRRIRK
CQRGREQQEKEGKEGNSKKSMENVESLDKLECKFKLNSYKMVYVIKSEDYMYRRTALLRA
QQSHERVSKRLHQRFQAWVDKWTKEHVTREMAAETNKWLMGEGLEGLVPCTTSCDTETLH
FVSINKYRVKYGSVFKTP
NT seq
3837 nt
NT seq
+upstream
nt +downstream
nt
atgaagcggcgtttggatgagcaggagtcaccggtgtatgcgtcacagcagagacgtatc
accagcagcacagaagctttcccgcaccgggtccttgctccagcacctcctgtatatgag
gcagtttcagagaccatgcagtctgccacaggaattcagtactctgttactcccagctac
caggtttcagctgtgccacagagctcaggcagccacgggcctgcgatagccactgtccat
gggggccatcaccacactacgccagtgcagcctcacgggagccaagtggtgccgagtcac
gctcacccgacccctccagcagcgccagtgcaggggcagcagcagtttcagaggcttaag
gtagaggatgccctgtcttatcttgaccaggtgaagctgcagtttggtagtcaacctcag
gtctacaatgatttcctggacataatgaaggaattcaagtctcagagtattgacactcca
ggagtgatcagccgcgtgtctcagctcttcaaaggtcaccctgacttgatcatgggcttc
aataccttcttgccacctggctacaaaattgaggtgcagacgaacgacatggtgaatgtg
acaaccccagggcaggtccatcagatccccacccacggcctccagccgcagccccagccc
caacctcagcacccatcccagccttcagcgcagtcgactccaaccccagcgcagccggca
ccacagcctccacctgccaaaatcagtaagccttcgcagttgcaggcacatacgccagcc
agccagcagactcccccgattcctccgtatgcatccccgcgctctcctcctgtgcagcct
catacacccgtgacaatctctcttggagcaacgccgtccttgcagaacaatcagccagtt
gagtttaatcatgccatcaactacgtcaacaagatcaagaatcggttccagggacagcca
gacatctataaggcctttctggagatcctccacacatatcagaaggagcagcggaatgcc
aaggaggcaggtggtaactacaccccagctttgacagagcaagaggtgtacgcacaggtg
gcgcgcctcttcaagaaccaggaggatttactttccgagttcgggcagttcctgcctgat
gctaacagctctgtgctgttaagcaagacgacggcagagaaagtggagtcggtgagaaat
gaccacggtggtacggtcaagaaaccgcagctcaacaacaagcaacagaggcccaaccaa
aatggctgtcagatcagacggcactcaggaactggagcagcacccccggtgaagaagaaa
ccaaagctgcttggtttaaaggaccagtcgttagcagaagccagcaagcatggggtaggg
acagaatctctgttctttgagaaggtgcgcaaggctctgcgtagcacagaggcatatgaa
aattttcttcgctgcctggttatctttaatcaagaggtgatctcccgggctgagcttgtg
cagctagtttcgccattcttggggaaattcccagagcttttcacttggtttaaaaacttc
ctgggttacaaggagtctgttcacatggagtcatttccaaaagaacgggctacagagggg
attgccatggagatagactatgcctcttgtaagagactgggctccagctaccgagccttg
cccaagagttaccagcagcccaagtgcactgggcggactccactgtgcaaggaggttttg
aatgatacttgggtctccttcccttcgtggtctgaggattccacctttgtcagctccaag
aagacacaatacgaagaacacatctaccgatgtgaggatgagcgttttgagctggatgtt
gtcttggagaccaacctggcaacaatcagagtcttagaggcgatccagaagaaactctcc
cgcttgtctgccgaggagcaagccaaattccggctggacaacactctggggggcgcctca
gaggtgatccaccgtaaggcgctgcagaggatatatgctgacaaagcggccgacatcata
gatggtctgaggaagaacccatcagttgctgttcctattgtgctgaaaaggttaaagatg
aaagaggaggagtggcgagaagcccagagaggattcaacaaggtctggagggagcagaat
gagaaatattacctgaaatctctggatcaccagggcatcaacttcaaacagaacgacacc
aaggtcctgaggtcaaagagcctcctcaatgagattgagagcatctacgatgagaggcaa
gaacaggcatcagaagataatgctggagttcccataggtccacacctgtccctagcctat
gaagacaagcaaatcctggaggatgctgcttctctgatcatccaccacgtgaaacggcag
acaggaatccagaaggaggacaagtacaaaatcaagcagattatgtaccacttcattcca
gacttgctgttcgctcagcggggcgagctctccgacgtggaggaggaagaggaggaggaa
atggatgtggatgaagccaccggggctgcaaaaaagcacaacggggttggaagcagcccc
ccgaaagccaagctgctcttcagcaacacggcagcccagaagcttcggggggtggacgaa
gcgtacaaccttttctacgtcaacaacaactggtacatcttcatgcggcttcaccaactc
ctgtgtttgcggctgctgcggatttgcacccaggccgaacggcagatcgaagaggagaac
cgggaaagggagtgggaacgggaggtgctaggcatcaaacgagacaagagcgacagtcca
gcaatccagctgcgactcaaggagcccatggacattgatgtggaggattactacccagct
ttcttggacatggtgcggaacctgctggatggcaacatggattcgtcccagtatgaggat
tccctgcgggagatgttcaccattcatgcctacatcgcctttaccatggacaagctgatc
cagagcatcgttcgacagcttcagcacattgtaagcgacgagatctgtgtgcaggtgacg
gacctttacctgtcggagaacagcaacggtgctaccggcggcctgctgtcctcacagtca
tctcggactcttgtggaggccacgtaccagcgcaaagccgagcagctcatgtcggatgag
aactgtttcaagctgatgttcattcagagcagaggccaggtccagttaaccatcgagctg
ctggataccgaagaagagaactctgatgacccagtggaggcagagcgttggtcagactac
gtcgagcggtacgtcaactcggattctacctctcctgagcttcgggagcacctggcccag
aagccggtcttcctgcccagggattctctggtttacaggaacctgaggcggatccgtaag
tgtcagcgtggtcgggagcagcaggagaaggaagggaaggagggaaacagtaagaagtcc
atggagaacgtggagagcttggacaagctggagtgtaaattcaaactgaactcctataag
atggtgtacgtgatcaaatcggaggattacatgtacaggaggaccgctctgctgcgtgct
cagcagtcccacgaaagagtgagcaagcggctgcaccagcggttccaggcctgggtggac
aaatggaccaaggagcacgtgactcgtgaaatggcagctgagacaaacaagtggctaatg
ggagaagggttggaaggtttggtgccctgtaccaccagctgtgacacagagaccctccac
tttgtgagcattaataagtaccgtgtcaaatacggctcagtattcaaaacaccgtaa
DBGET
integrated database retrieval system
