Carettochelys insculpta (pitted-shelled turtle): 142019865
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Entry
142019865 CDS
T11194
Symbol
TMC3
Name
(RefSeq) transmembrane channel-like protein 3
KO
K21988
transmembrane channel-like protein
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ciz02000
]
142019865 (TMC3)
03037 Cilium and associated proteins [BR:
ciz03037
]
142019865 (TMC3)
Transporters [BR:
ciz02000
]
Other transporters
Pores ion channels [TC:
1
]
142019865 (TMC3)
Cilium and associated proteins [BR:
ciz03037
]
Other cilia and associated proteins
Stereociliary proteins
142019865 (TMC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
DUF4577
TMEM43
Motif
Other DBs
NCBI-GeneID:
142019865
NCBI-ProteinID:
XP_074863303
LinkDB
All DBs
Position
12:28793461..28825556
Genome browser
AA seq
1086 aa
AA seq
DB search
MGVDPFSNSDNDNCDLKADSNDPEQIFQNIQYQKEIVANIRCRPWPMRQKLRALRQAKEI
VLKYEGRLTRTRGYQAAGAELWKKFVRLAYNFLVIFIPWEMRIKKIESHFGSGVASYFIF
LRWLFGINIVLTIMTGAFVVLPELLAGAPFGSTVSKSIPKEQFASAQDLDTIWSLGGYLQ
YSVLFYGYYGRDRKIGKAGYRLPLAYFLVGMAVFAYSFIILLKKMAKNSRMSLASASDEN
YSFCWRVFCAWDYLIGNPEAAESKAAAIVNSIREAILEEQEKKKSKNLAMTICLRIIANI
LVLLSLAGSIYIIYFVVDRSQKLERTKKELTLWEKNEVSVVVSLITMIAPSAFELVAALE
MYHPRTTLRFQLARVLVLYLGNLYSLIIALLDKVDSMSITEAKANSSESNGIDSTTFLAT
RTVPEEDNLPTTVPNIRMRRNSTMDLDKSHPQNYTIPFVLVNKSTSYPHNVQSQKDQCWE
TYVGQEMLKLSIIDMLFTVASILLIDFFRGLFVRYLSDCWCWDLESKFPEYGEFKIAENV
LHLVYNQGMIWMGAFFSPCLPAFNVLKLIGLMYLRSWAVLTCNVPHQQVFRASRSNNFYL
AMLLFMLFLCMLPTIFAIARYKPSLSCGPFSGQEKIYDIVSETIKTDFPVWFNTVINYIS
SPVVVLPALLLLFMLIYYLQSIARSLKFTNSQLRMQIQTERIEDKKKVVQMAVARIQNLE
GNDKRPEQESDLISRESSARSSTPRKNGSVLNFESPVSKGSRIQTISQSVPQADVTRPAN
KSPATPTHLTSTPSMQKRRTERAANRYSSVVHGSASELCKTKPYPPFKKHVEDVHSEPLF
RKGIRQVSPDARGTRAPAFVGRKVPTTRYFIVNEHDSRKKLLRSTSRLPRHFRMEESGDI
VELYPRNIRRYVVRTPHRTYSPHFSEEEEELRRELINRSYRPRSLSDLRPAPRFYIGERV
DSQVLTGKDLTKVHYKSWDNGFELEQDRPPHSEKRSHMKHVAVDQHYPEHHGKPKSRHKL
DQSLTESDSISISSSDQQTSSNDQYIQVIHSKEKYLKSGAKLTRKKSKTNIDLSMSTSNE
LVCSNV
NT seq
3261 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtggatcccttcagtaactcggacaatgataattgtgatttaaaagctgacagc
aatgacccagagcaaatcttccagaatatacaatatcaaaaagagattgtggcaaacatc
cgttgcagaccatggcccatgagacagaagctgagggcactcagacaagctaaggagatt
gtgttgaaatatgaaggcaggctcacgaggacaagaggttaccaagcagctggtgcagag
ctctggaagaagtttgttcggcttgcatataacttcctagtaatcttcattccttgggaa
atgagaataaagaaaatagaaagtcatttcggatccggagttgcctcttatttcatcttt
ttgagatggctatttggaatcaatattgtgcttaccataatgacaggtgcatttgtggtc
ttaccagagctcctggcaggagcaccgtttggaagcaccgtcagcaaatccatcccgaag
gagcaatttgcatcagcacaggacctggacaccatctggtccctggggggttatctccag
tactccgttttattttatggctactatggccgagatcggaagattgggaaagctgggtat
cgtctgcccctggcttacttccttgttggcatggcagtgtttgcttacagcttcatcatt
ctcttaaaaaaaatggcaaagaactcaagaatgagtctagcaagtgcctctgatgaaaat
tatagcttctgctggagagtgttttgtgcttgggactatttgataggaaatccagaggct
gcagagagcaaagctgctgcaatagttaatagtatcagggaagcaatattggaagagcag
gaaaagaagaaaagcaaaaacctggccatgacaatatgcttaaggattattgcaaacatc
cttgtgcttctctcacttgctggaagtatttacatcatttactttgttgtggatcgatcc
caaaaattagagcgtaccaaaaaggagctgacgctttgggagaaaaatgaggtcagcgtt
gttgtttcactaattactatgattgcgccctctgcatttgaacttgtggcagcactagag
atgtatcaccctagaaccactcttcgctttcagcttgccagggttctcgttttatacctg
ggaaacctctacagtttaatcattgctctgttggataaagtggacagcatgagtatcact
gaagccaaagctaacagcagtgaaagtaacgggatcgattccaccaccttcctagccacc
agaactgttcctgaagaagacaacttacctacaactgtcccgaatataagaatgaggaga
aatagcacaatggatctggacaagagtcatcctcagaactataccatacctttcgtgctg
gttaacaagagcacatcttatccccacaacgtacaaagtcagaaggatcagtgctgggaa
acctatgttggtcaggaaatgctgaagctgtcaattatcgacatgcttttcacagtggca
agcattctgctgatagacttcttccgcggactctttgtccgatacttaagtgattgctgg
tgctgggatctggaaagcaagtttccagaatatggagaattcaaaattgcagaaaatgtg
ctacatttggtctacaaccaaggaatgatttggatgggagccttcttttcaccctgcctc
ccagccttcaatgttctgaagctgattggccttatgtacctgaggagctgggctgtgtta
acgtgtaatgtaccacatcagcaggtcttcagagcttcaagatctaataacttctacttg
gctatgttgctgtttatgttgttcttatgcatgttacccacaatttttgctattgcccga
tataagccatctttaagctgtggtccattcagtggacaagagaaaatatatgatattgtg
tctgaaacaattaagactgatttccctgtgtggttcaacacagtgattaattacatcagc
agccctgtagttgtcctgcctgcattgttactactgttcatgttaatttattacctgcag
agtattgcaaggtcattaaaattcaccaacagtcaactgagaatgcagatccaaactgaa
agaattgaagacaagaaaaaggtggttcagatggcagtagccagaatccaaaatcttgag
ggaaatgacaaaagaccggagcaggagagtgaccttatcagtcgggagtcttcagctcgt
tcatcaacaccccgaaagaatggcagtgtcttgaattttgaatctccagtaagcaaaggc
agcagaatacaaacaatctcacaatctgtaccccaagcagatgttactaggccagcaaat
aaaagtccggcaactccaacccacttaacatcaactcctagcatgcagaaacgtagaact
gagcgagctgcaaacaggtattcaagtgttgtgcatggaagtgcaagtgagctctgtaaa
acaaagccttatcctcctttcaagaagcatgttgaagatgttcattctgagcctctcttt
aggaaaggtatccgacaagtaagcccagatgctcgggggaccagggctcccgcttttgtg
ggacgcaaagtgcccaccacaaggtattttattgttaacgaacatgactcccgcaaaaag
cttctccgttccacttcccggctcccacggcatttcagaatggaggagtcaggagacata
gttgaattataccccaggaacatcagaagatatgtggttcgaacaccacacaggacatac
tcccctcactttagtgaagaggaggaggaattaaggagagagttaataaacagatcctac
cgtccacgctcactctcggatcttcgcccagctccacgattttacatcggtgaacgtgtt
gacagtcaagtccttactggcaaggatctaaccaaagtgcactacaagtcctgggacaac
ggctttgagctagaacaagataggcccccacattctgagaaaaggtcacacatgaagcat
gtggctgttgatcagcactatccagagcatcacgggaaacctaaatccaggcataagctt
gaccaatctctaactgagtcggattctatttccatttccagcagtgatcagcaaaccagc
agtaatgatcagtacatccaggtcattcatagtaaggagaaatatctgaaatctggggca
aaacttaccagaaagaaatcaaagaccaatattgacctaagcatgtccacatctaatgaa
ctggtatgttccaatgtctaa
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