Carettochelys insculpta (pitted-shelled turtle): 142020054
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Entry
142020054 CDS
T11194
Symbol
RLIM
Name
(RefSeq) E3 ubiquitin-protein ligase RLIM
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ciz04121
]
142020054 (RLIM)
Enzymes [BR:
ciz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
142020054 (RLIM)
Ubiquitin system [BR:
ciz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
142020054 (RLIM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
Prok-RING_4
zf-RING-like
zf-RING_16
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
142020054
NCBI-ProteinID:
XP_074863735
LinkDB
All DBs
Position
13:21578747..21596224
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AA seq
596 aa
AA seq
DB search
MESSDSNDKGSIDHSEAQRRSQLDRLEREEAFYHFVNNLNEEDYRLMRDNNLLGTPGEIT
EEELVRRLQQVKEGPPQQNGDDNRGAESTEDVSNRDSIIDWLNSVRQTGNTTRSGQRGNQ
SWRAVSRTNPNSGDFRFSLEINVNRNNGNPNPEAENEPSVEPSHGEDLENSQSDTETPRS
ESPSARQPGSERSTSEELATEEASPLRGQRRARSRSPEQRRTRARTDRSRSPINPASETP
RRSPNNVPSQTLDHSLVNESEGSSRTRQHVMLRQHTTGTEMASENAVLFSTPETRPAPPG
LGSAETNVSSESAPPGQRPPTIVLDLQVRRVRPGEYRQRDSIANRTRSRSQTPNNTVTYE
SERGGLRRTFSRSERAGVRTYVSTIRIPIRRIINTGFNETTSVAIQTILRQIMTGFGELN
YYMYSDGDADPNGPAPNQNVDAPEVQNVGDNGGSSRSESTEGNSGEVYESSNEGGSTSAR
REGRNSRGSVTFEESGSLPFLSLAQFFLLNEDDDDQPRGLTKEQIDNLAWRNFGESDALK
TCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLASANRESVV
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atggaaagctctgattctaacgataaaggatctattgatcactcagaagcacaacgccgg
agtcagctggatcgattagaacgtgaagaagcattttatcattttgttaataacctgaat
gaagaggactataggcttatgagggataacaatttgttaggaacaccaggtgaaatcact
gaagaagaattggtaagaaggctacagcaagttaaagaaggtccaccacagcaaaatggt
gatgacaatagaggtgcagaatccacagaagatgtttctaatagagattccattatagac
tggcttaattccgtacgacagactggaaacacaacccggagcgggcaaagaggaaaccag
tcttggagggcagtgagccggactaaccctaacagtggtgattttagattcagtttggaa
ataaatgtcaaccgaaataatgggaacccaaacccagaagccgaaaatgagccatctgta
gagccctcccatggtgaggatttggaaaatagccaaagtgatactgaaacgccaagatct
gaatcaccatctgcaagacagcctggatcagaacgaagtacctctgaagagttagcaact
gaggaagcatctcctctcaggggccagagaagagcaagaagcaggagcccagaacaacga
agaacccgggctaggactgataggagtaggtcacctattaatccagcaagtgagactcct
cgcaggtctcctaataatgtgccatctcagacacttgatcattccctggtaaacgaatct
gagggaagttctagaactagacagcatgtgatgttaaggcaacatacaacggggactgag
atggcaagtgaaaatgcagttctcttttcaactcccgaaacaagacctgctcctccagga
ttaggttctgcagaaacaaatgtcagcagtgagtccgcacctcctggacagagaccacct
actatagttcttgatcttcaggtgagaagagtccgtccaggagaatatcggcagagagac
agcatagccaaccgaacccgatccaggtcccagacaccaaacaatacagtcacttatgaa
agtgaacgtggagggcttaggcgaacgttttcacgttcagaacgggctggagtgagaact
tatgtcagtaccattaggatccctattcgtagaattataaacacaggctttaatgagaca
acatcagttgcaattcagaccattctaaggcagataatgacgggttttggagagttaaat
tactatatgtacagtgatggtgatgcagatcctaatggcccagccccaaatcaaaatgta
gatgctcctgaggtacagaatgtaggtgacaatggtggtagttcacgcagtgaaagtact
gaaggtaactcgggggaggtgtatgaaagtagcaatgaaggaggttcaacatctgctagg
cgggaaggtcggaatagtagggggtcagtcacttttgaagaaagtggctctttaccattc
cttagcctagcacagttttttctgctaaatgaggatgatgatgaccagcctagaggactc
accaaagaacaaattgacaacctagcatggaggaattttggtgaaagtgatgctctgaaa
acctgtagtgtctgtattacagaatacacagaaggcaacaagcttcgtaaactgccttgt
tcccatgagtaccacgtccactgcattgatcgctggttatcagaaaattccacttgtcct
atttgtcgtagagctgtcttagcatctgctaacagagaaagtgttgtctaa
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