Carettochelys insculpta (pitted-shelled turtle): 142020072
Help
Entry
142020072 CDS
T11194
Symbol
CSTF2
Name
(RefSeq) cleavage stimulation factor subunit 2 isoform X1
KO
K14407
cleavage stimulation factor subunit 2
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Pathway
ciz03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
142020072 (CSTF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ciz03019
]
142020072 (CSTF2)
Messenger RNA biogenesis [BR:
ciz03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
142020072 (CSTF2)
U7-dependent histone pre-mRNA processing factors
142020072 (CSTF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_7
RRM_10
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
142020072
NCBI-ProteinID:
XP_074863762
LinkDB
All DBs
Position
13:41213094..41228360
Genome browser
AA seq
656 aa
AA seq
DB search
MAGLAVRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYG
FCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGTGAPIIESPYGDPIN
PEDAPESISRAVASLPPEQMFELMKQMKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMR
IVDPEIALKILHRQTSVPPLIPGNAQPVPGPGPGPGPGPGPGPGPGPLPGPGPGPGPGTG
PGPNPQMNQQNPPSSQPQPIGGMHVNGAPPLMQPPMQGGVPAPGQMPTSVGGPGPGPMAP
GGGMQPQVGMPGGGPVPMERGQGNLQLSPVGPARPASIERVQVPMPDPRAPMQRGPLPAS
GPPPRGLLGDAPNDPRGGTLLSVTGEVEPRGYLGPPHQGPPMHHMPGHDNRGPPPHEMRG
GPMGEPRPLMGEPRGPLMDARGGRDPRGMEPRVMEPRGMEPRVMEPRGMEPRVMEPRGME
PRVMEPRGMEPRVMEPRGMEPRGMEPRGMEPRGMEPRGMEPRGMEPRGMEPRGPGPNPRG
PMPGGIQGPGPINMGASGPQGPRQVPNMPGAGIQGGGMPGPGIQGGGMQGPVVQGAGQPG
GFSPGQNQVTPQDHEKAALIMQVLQLTADQIAMLPPEQRQSILILKEQIQKSTGAP
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atggcggggctggcggtgcgggaccccgcggtggatcggtcgctgcgctccgtgttcgtg
gggaatatcccatacgaagccacagaggagcagctaaaggacattttctcagaggtcgga
cctgttgtcagtttcaggttggtgtatgacagggagacaggcaaacccaagggctatggc
ttttgtgagtatcaagaccaggagacggcgctcagcgccatgcggaacctgaacgggcgt
gagttcagtggaagggcattgcgtgtggacaatgcagccagcgagaagaacaaggaggag
ctgaagagcttgggcacaggtgcccccatcattgagtcgccctatggagacccgataaac
cccgaagatgcccctgagtccatcagcagggcggttgccagcctgccacctgagcagatg
tttgagctgatgaagcagatgaagctgtgtgtgcagaacagccctcaggaggcgcggaac
atgttgctgcagaacccacagctggcgtatgccttgctccaggcccaagtggtgatgagg
atcgtcgatccggagattgctctgaaaattctgcatcgtcagaccagcgttccacctctg
attccaggcaatgctcagcccgtgcctgggcctgggcctgggcctggacctggccctggc
cctggccctggccctggccctctccctgggcctggccctggccctggccctggcactggt
ccaggacctaatccacagatgaaccagcagaaccccccgtcgtcccagccacaacccata
ggtggcatgcacgtaaatggagctcctcctctgatgcagcctcctatgcagggtggcgtg
ccagccccaggacagatgccaacctcagtaggtggcccagggcctggccccatggctcct
ggaggaggaatgcagcctcaggttgggatgccagggggtggaccagttcccatggaacgt
ggacaaggaaacctgcagctctcgcccgtgggacctgccaggcctgcgtctatcgagcga
gttcaagtgcccatgccggacccacgggcccccatgcagcgtggaccattgccagctagc
ggcccgccaccccgcggccttctgggggacgccccaaatgacccgcgtggagggaccctg
ctctcagtcactggagaagtggagcccagaggctaccttgggccaccccaccaggggcca
cccatgcaccatatgcccggccatgacaatcggggcccacctccacatgaaatgagggga
gggccgatgggagaaccccggccactgatgggagagccaagagggcctttgatggacgcg
cgaggtgggagagatcccagaggcatggagccgcgagtgatggagccccggggcatggag
ccgcgagtgatggagccccggggcatggagccgcgagtgatggagccccggggcatggag
ccgagagtgatggagccccggggcatggagccgagagtgatggagccgagaggcatggag
ccgagaggcatggaacccagaggcatggagccgagaggcatggagccaagagggatggaa
cccagaggcatggagccacgaggcatggagcccagaggtcctggccccaacccaaggggc
ccaatgcctggtggaattcaagggcctgggccgattaacatgggagcaagtggccctcag
ggacccagacaggttcccaacatgccaggggcaggcatacaaggaggtggcatgccaggg
cctggcatacaaggaggaggcatgcaggggccagtggtacaaggagctggccaaccagga
ggctttagccctggacagaaccaggtcaccccccaagatcacgagaaggctgccctgatc
atgcaggttctccagctgactgcggaccagatcgccatgctgcccccagagcaaaggcaa
agcatcctcatcctgaaggagcagatccagaaatccactggggctccgtga
DBGET
integrated database retrieval system
