Carettochelys insculpta (pitted-shelled turtle): 142020081
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Entry
142020081 CDS
T11194
Symbol
PCDH11X
Name
(RefSeq) protocadherin-11 X-linked
KO
K16498
protocadherin delta 1
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Pathway
ciz03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
142020081 (PCDH11X)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ciz01009
]
142020081 (PCDH11X)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ciz04515
]
142020081 (PCDH11X)
Protein phosphatases and associated proteins [BR:
ciz01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
142020081 (PCDH11X)
Cell adhesion molecules [BR:
ciz04515
]
Cadherins
Protocadherins
142020081 (PCDH11X)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
Cadherin_FAT4_N
Fibulin_C
K319L-like_PKD
TMEM154
Cadherin_4
DUF6249
Big_9
Motif
Other DBs
NCBI-GeneID:
142020081
NCBI-ProteinID:
XP_074863781
LinkDB
All DBs
Position
13:35136340..35517922
Genome browser
AA seq
1044 aa
AA seq
DB search
MDLLSGTYLLAFLLACIIFQSGAQEKNYTVREELPENVLIGNLLKDLNLTLDPDVSLSSP
LQFKLVYKTGDVPLVRVEENTGEIFTTANRIDREKLCSGIFSENRCFYEVEVAVLPDEVF
RLVKIRFLIEDINDNAPLFPSTVINISIPENTAINSRYSVPSAIDPDIGVNGIQHYELLK
PKTAPKRTFGSITNEQGQNVFGLDIIETPEGDKWPQLIVQQILDREQKDTYVMKIKVEDG
GTPPRSSTAILQVTVTDVNDNRPVFKENDIEVSVPENAPVGTSVSQLHATDADLGSNAQI
HFFFSNQISNLAKRLFALDNTTGLITIKEPLDREESPVHKLTVLASDGSSTPSRATVTVN
ITDINDNVPSIDTRYIINPVNGTVLLSEKAPLNTKIALITVTDKDADMNGKVTCFTDHDV
PFRLKPVFDNQFLLETATFLDYEATREYAIKIVASDSGKPPLNQSAMLLIKIKDENDNAP
VFTQPIIGLSIPENNAPGTQLTKISATDADSGRNAEISYMLGSDAPPIFNLDRRTGVLTA
VRKLDREKQDRYSFTVLAKDNGMPPLQTNATVTLSVLDQNDNSPAFTHNEYNFYVPENLP
MYGTVGLITVTDADSGENAAVTLSILNGRENFIIDPLTGVIRPNITFDREQQGSYTFQVR
AVDGGRVQRSSTAKVTINVVDVNDNRPVFIIPSSNYSYDLVPTATNPGSVVTKVFAVDND
TGMNAELRYSIIGGNSRGLFIIDQLTGNITLKEKVITADHGLHRLVIKVNDLGQPESLYT
IALVHLFVNETITNGSYVQELVRRNMETPVGQNVGDGEITPQTNDYVKIIIAIIAGTMTV
ILVIFVTALVRCRQTPRHKVVQKSKQSGEWVSPNQENRQIKKKKKKKKRSPKSLLLNFVT
IEESKPDDPSHEHINGTLDIPVELEEQTMGKYNWATTPTTFKPDSPDLAKHYKSASPQPT
FQIKPETPVPPKKHHVIQELPLDNTFVVGCDSLSKCSSSSSDPYSVSECSCQGGFKTPGS
IHTRQSLMIMEDQPTESRSSRVSC
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atggacttgctgtctgggacctacctcttggcattcttactagcctgcattatatttcag
tctggtgcccaagaaaagaattatacggtgagggaagaactgccagaaaatgtcctgatt
ggcaatttgctcaaggatctgaacttaacactggacccagatgtgtccctttcatcaccg
cttcagttcaagctagtgtataagactggggatgtgccattagtccgagtggaggaaaac
actggcgagatattcacgactgccaaccgcatagaccgagagaagctgtgctctggcatt
tttagtgagaaccgctgtttttatgaggtggaggttgcggttttgcctgatgaagtcttt
agactcgtcaagatcagattcctgatagaggatatcaatgacaatgctcccctttttccc
tcaacagtcattaacatctccatccctgagaacacagccattaactcccgctattctgtc
ccatctgccatcgatcctgacattggtgtgaatggcattcagcattatgaacttcttaag
cccaaaacagctccgaaaaggacatttggatccattacgaatgaacagggtcaaaatgta
tttggactcgatataattgaaacacctgagggagacaagtggccacaattgattgtccag
cagatcctggacagggagcaaaaagacacatatgtgatgaagattaaagttgaagatggt
ggaacacctcccagatccagtacggccatcctacaagtcacagttactgatgtgaatgac
aaccgcccagtcttcaaggaaaatgacatagaagttagcgtgccagaaaatgctcctgtg
ggcacctcagtttctcagctccatgccactgatgctgatctgggttcaaatgcccagatc
cacttcttcttcagcaatcagatctccaatctggccaaaaggctgtttgccttagataat
accactggcctcatcaccattaaggaaccgctggacagggaggagtcacctgtacacaag
ttaacagttttggccagtgatgggagctcaacaccttcaagagcaacagtgacggtaaat
atcacagatattaatgataacgtcccatccatagacacaagatacattatcaatccagtg
aatgggactgtgctattgtctgaaaaagcgccactcaatacaaaaattgctctgattaca
gtaacggacaaagacgcagatatgaatggaaaagtgacctgcttcacagaccatgatgtc
cctttcaggttaaagccagtgtttgataatcagtttctgttagagactgctacgtttcta
gactatgaggctacacgagaatacgccattaaaatagtggcctctgattcagggaaacct
cccttaaatcagtctgcaatgttgctgatcaaaatcaaagacgagaatgacaatgcccct
gtttttacacagcccatcataggactttccattcccgagaacaatgctcctggtacccag
ctaaccaagatcagtgccacagatgcagacagtggacggaatgcagagatcagctacatg
ctgggttctgatgcaccccccattttcaacctggaccgccgtacaggtgttctgaccgca
gtgagaaagctggacagggaaaagcaggacaggtactccttcacggtgctggctaaggat
aatgggatgccacctctgcagactaatgccactgtgacactctcagttctggaccagaat
gacaacagccctgcttttacccacaatgagtataatttctatgtgccagaaaacctgccc
atgtatggcacagtgggtctcatcacagtgactgatgctgactctggagaaaatgctgca
gttactctctctatattaaatggtagagagaatttcattatcgatccacttactggtgta
ataagacccaatattacatttgatagagagcaacaagggtcttacactttccaggtgagg
gctgtcgatggaggaagagtgcagcgctcttccactgccaaagtgaccataaatgtagtt
gatgtgaatgacaacaggcctgttttcattatcccttcgtctaactactcctatgacttg
gttcctacagccaccaatccaggctccgtggtgactaaagtctttgcagttgacaatgat
acagggatgaatgcagagctccgctacagcattataggtgggaattcaagaggtttgttt
ataattgatcagttaacaggcaacattactttgaaagagaaggtaatcacagcagatcat
ggattacacaggctggtgataaaagtcaacgatttagggcagccagagtctctctatact
attgcactggtgcatttatttgtgaatgagacaatcaccaatggttcatatgtacaggag
ctagtgcgtaggaatatggaaacacccgtgggccagaatgttggggatggtgagataacg
ccacagaccaatgactatgtcaaaatcatcattgctataattgcaggtaccatgacagtc
atcttggtcatttttgtcactgctctggtacgatgccgccagactccccggcacaaagtt
gtccaaaaaagcaagcagagtggggagtgggtctccccaaaccaggagaaccgacagatc
aagaaaaagaagaagaaaaagaagcgctcgcctaaaagcctccttctcaactttgtgaca
attgaagaatctaagcctgatgaccccagccatgagcatataaatggcactttagacatt
cctgtagagctagaagaacagactatgggaaaatataactgggccaccacaccaaccacg
tttaagcctgacagcccagatttagcaaagcattacaagtctgcctctccacagcccacc
tttcaaattaaacccgagactcctgtgccccctaagaagcaccacgtcattcaggaactg
cctctggataacacctttgtggtaggctgtgactcactctccaagtgttcctcaagcagt
tcggacccgtacagtgtctccgaatgcagctgccaaggtggcttcaagacaccaggctcc
atccacaccagacagagtctgatgatcatggaagatcagcctactgagagtcgatcttcc
agggtttcatgttaa
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