Carettochelys insculpta (pitted-shelled turtle): 142020171
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Entry
142020171 CDS
T11194
Symbol
PCDH19
Name
(RefSeq) protocadherin-19 isoform X1
KO
K16499
protocadherin delta 2
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ciz04515
]
142020171 (PCDH19)
Cell adhesion molecules [BR:
ciz04515
]
Cadherins
Protocadherins
142020171 (PCDH19)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
PepSY
RET_CLD1
Motif
Other DBs
NCBI-GeneID:
142020171
NCBI-ProteinID:
XP_074863919
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All DBs
Position
13:complement(40902078..41034593)
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AA seq
1095 aa
AA seq
DB search
MDRLPVLLALLWSGAGALINLKYSVEEEQRPGTVIANIAKDARDAGFVLDPRQPAAFRVV
SNSAPHLVDISPGSGLLVTKQKIDRDLLCRQSPKCVISLEVMSSSMEICVIKLEIKDLND
NAPSFPTDQLELEISETASPGTRLPLESAYDPDSGSFGVQRYELTPNDLFGLETKTRGDG
SRFAELVVERGLDRETQSHYSYLLTALDGGDPPHMGTVALSIRVIDSNDNNPLFEEPAYT
VSVPENAPPGTPLLRLNASDPDEGTNGQVLYSFHSYVSERARQLFHLDPQSGLLSVSGTV
DYEEGHSYELDVQAKDLGPNSIPAHCKVTVSVQDANDNPPLINLLSVNSELVEVSESAPP
GYVIALVRVSDRDSGANGRVQCKLLGNVPFRLQEYESFSTILVDGRLDREQRDQYNLTIQ
ARDNGVPSLQATKSFTVKITDENDNHPHFSKPYYQVIVQENNTPGAYLLSVSARDPDLGL
NGSVSYQIVPSQVRDMPVFTYVSINPNSGDIYALRSFNHEQTKAFEFKVLAKDGGNPSLQ
SNATVRVIVLDVNDNTPVITAPTLVNGTAEVYIPRNAGVGYLVTVVKADDYDEGENGRLS
YEMADGDRGFFEIDQFNGEIRTTRAFGENAKTTYELIVVAHDHGKTSLSASALILIYLSP
ALDAQESIGSVNLSLIFIIALGSIAAILFVTMIFVAVKCKRDNKEIRTYNCRIAEYSYAH
QKKSSKKKKISKNDIRLVPRDVEETDKMNVVSCSSLTSSLNYFDYHQQTLPLGCRRSEST
FLNVENQNTRNTAGSNHVYHHTFTGQSPQQPDLIINGMPLPETENYSFDSNYVNSRAHLI
KSSSTFKDLEGNSLKDSGHEESDQTDSEHDVQRGLYCDTAVNDVLNTSVTSMGSQMPDQD
QSEGFHCREECRILGHSDRCWMPRNSVPSRAKSPEHGRNVMALSIEATTVDTEPYEDCST
KRTFATFGKDGSEPLADERIGNLKGKRTVDLPICSPKVNGAVREAGNGCEAVSPITSPLH
LKSPLSSKPSVSYNIMHCPGNRDLEQFVNSGPSRPTEAEPRGADSENIMHEINPLLQECR
EKDSPGVKRLKDIVL
NT seq
3288 nt
NT seq
+upstream
nt +downstream
nt
atggatagactccccgtgctgctcgccttgctgtggagcggggccggggccctgatcaac
ctcaagtactcggtggaggaggagcagcgcccgggcacggtgatcgccaacatcgccaag
gacgcccgggatgcgggcttcgtgctggacccccgccagcccgccgccttccgggtggtc
tccaactccgcgccgcacctggtggacatcagccccggctcgggcttgctggtgaccaag
cagaagatcgaccgggacttgctgtgccgccagagccccaagtgcgtgatctcgctggag
gtgatgtccagctccatggagatctgcgtgatcaagctggagatcaaggacctcaacgac
aatgcccccagcttccccacggaccagctggagctggagatctcagagacggccagcccg
ggcacccgcctgcccttggagagcgcctacgaccccgactcgggcagcttcggcgtgcag
cgctacgagctcacccccaacgacctcttcggcctggagaccaagacccggggggacggg
tcccgcttcgctgagctggtggtggagcggggcctggaccgcgagacccagtcccactac
agctacctgctgacggcgctggacggcggcgacccgccccacatgggcacagtggccctc
agcatccgggtcatcgactccaacgacaacaaccccctcttcgaggagccggcctacacc
gtcagtgtgcccgagaacgcccctccgggcacgcccctgcttcgcctcaacgcctccgac
ccagatgagggcaccaacggccaggtgctctactccttccacagctacgtgtcggagcgg
gcccgccagctgttccacctggacccgcagagcggcctgcttagcgtcagcggcacagtg
gactacgaggagggccacagctatgagctggacgtgcaggccaaggacctggggcccaac
tccatcccggcccactgcaaagtgacggtcagcgtgcaggacgccaatgacaacccaccc
ctcatcaacctcctctcggtcaacagcgagctggtggaggtgagcgagagcgccccgccg
ggctacgtcattgccctggtgcgggtctctgaccgcgactctggggccaatgggcgggtg
cagtgcaagctgctgggcaacgtgcccttccgcctgcaggagtacgagagcttctccacc
atccttgtggatgggcggctggaccgagagcagagggaccagtacaacctcaccatccaa
gccagggacaatggggtgccctccctgcaggccaccaagtccttcaccgtcaagatcaca
gacgagaacgacaaccacccccacttctccaagccctactaccaggtcattgttcaagag
aacaacacccctggggcctacctcctgtctgtctccgccagggacccggacctgggcctc
aatggcagcgtctcttaccagatagtgccctcccaagtcagggacatgcccgtcttcacc
tacgtctccattaaccccaactctggggacatctatgccttgaggtccttcaatcacgag
cagaccaaggccttcgagttcaaggtcttggccaaagatgggggcaacccgtccttgcag
agcaatgccaccgtgagagtgatcgtcctcgatgtcaatgacaacaccccagtgataact
gccccaacgctggtcaatgggactgcagaagtgtatatccccaggaacgctggggtgggt
tacttagtgacagtggtcaaggcagatgactatgatgaaggggagaatggaagactgtcc
tatgaaatggcagatggggatagagggttttttgaaatagatcagttcaatggggagata
aggaccaccagagcctttggagagaacgcaaagactacttatgagctgattgtggtggcc
catgatcatggaaaaacctcgctctcggcttctgctttgattttgatatacctgtctcca
gctctcgatgcccaggaatccataggatctgttaacttgtcgctgattttcattattgct
ctgggttctattgctgccattctttttgtcaccatgatctttgtggctgtcaagtgtaaa
agggataacaaggaaatcaggacctacaactgcagaattgcagagtactcctatgcacat
caaaagaaatccagcaagaagaaaaaaatcagcaagaacgacatccgactggtgccccgg
gatgtagaggagacggataaaatgaatgtggtgagctgctcctccctcacttcatctctc
aactattttgactatcatcagcagaccttgcccttggggtgccgcagatctgagagcacc
ttcctcaatgtggagaatcagaacaccaggaacaccgcgggctccaaccatgtttatcac
cacactttcaccgggcagagtccccagcaacccgatctgatcatcaacggaatgccattg
cccgagacggaaaactactcgtttgattccaactatgtgaacagcagagcccatttaata
aagagcagttcaactttcaaggacttggaggggaacagtctgaaggacagcgggcatgag
gagagtgaccagaccgacagtgaacacgatgtccagcgaggcctgtactgtgacactgct
gtcaacgatgtgctgaacaccagtgttacttccatggggtctcagatgcctgaccaagat
cagagtgaaggatttcattgtagggaagagtgtcggatcctcggtcactcagatagatgc
tggatgccccggaactctgtccccagtcgtgccaaatcccccgagcacggaagaaacgtc
atggcactctcgatagaagctaccactgtggatacagagccttacgaagactgtagcacc
aaaagaacttttgcaacgtttggcaaagatgggagcgaaccgctcgccgacgagcgtatc
ggcaacctgaaaggcaaaagaacagtggatctgcccatctgcagcccgaaggtaaatggc
gcagtccgcgaggcagggaacggctgcgaagctgtcagccccatcacatcacccctgcac
ctgaagagccccctgtctagcaaaccttctgtgtcgtacaacataatgcactgcccagga
aatcgcgacctggagcaatttgtaaacagtggcccttctcggcccacggaagcagagcct
cggggggcggacagtgaaaatataatgcatgaaattaacccacttctgcaagaatgtaga
gaaaaagactcgcctggcgtgaagagactaaaagacatagtactctaa
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