Carettochelys insculpta (pitted-shelled turtle): 142020183
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Entry
142020183 CDS
T11194
Symbol
CUL4B
Name
(RefSeq) cullin-4B
KO
K10609
cullin 4
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Pathway
ciz03420
Nucleotide excision repair
ciz04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
142020183 (CUL4B)
09124 Replication and repair
03420 Nucleotide excision repair
142020183 (CUL4B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ciz04121
]
142020183 (CUL4B)
03400 DNA repair and recombination proteins [BR:
ciz03400
]
142020183 (CUL4B)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ciz04147
]
142020183 (CUL4B)
Ubiquitin system [BR:
ciz04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
142020183 (CUL4B)
DNA repair and recombination proteins [BR:
ciz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
142020183 (CUL4B)
TCR (transcription coupled repair) factors
Cul4-CSA complex
142020183 (CUL4B)
Exosome [BR:
ciz04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
142020183 (CUL4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
SecA_SW
Motif
Other DBs
NCBI-GeneID:
142020183
NCBI-ProteinID:
XP_074863942
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All DBs
Position
13:complement(13970503..14010738)
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AA seq
881 aa
AA seq
DB search
MITSGFSSPNPPAAAQEVRPATDGNSSSSSSCKKRKLNNSSNNSEREEFDSISSCSSSPS
KNNSSSSSSIITTSSGGPSSNHHLQKKLRFEDSLDFIGLDVKMAEESSSSSPAASSQQQH
QQQLKNKSLLISSVAVGHHANGLTKAASSTVSSFANSKPGSAKKLVIKNFKDKPKLPENY
TDETWQKLKEAVEAIQNSTSIKYNLEELYQAVENLCSYKISANLYKQLRQICEDHIKAQI
HQFREDSLDSVLFLKKIDKCWQDHCRQMIMIRSIFLFLDRTYVLQNSMLPSIWDMGLELF
RTHIISDQKVQNKTIDGILLLIERERNGEAIDRSLLRSLLSMLSDLQIYQDSFEHRFLEE
TNRLYAAEGQRLMQEREVPEYLHHVNKRLEEEADRIITYLDQSTQKPLIATVEKQLLGEH
LTAILQKGLNHLLDENRIQDLSLLYQLFSRVRGGVQVLLQHWIEYIKAFGSTIVINPEKD
KTMVQELLDFKDKVDHIIDVCFLKNEKFVNAMKEAFETFINKRPNKPAELIAKYVDSKLR
AGNKEATDEELEKMLDKIMIIFRFIYGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSK
LKHECGAAFTSKLEGMFKDMELSKDIMIQFKQYMQNQNVPGNIELTVNILTMGYWPTYVP
MEVHLPPEMVKLQEIFKTFYLGKHSGRKLQWQSTLGHCVLKAEFKEGKKELQVSLFQTLV
LLMFNEGEEFSLEEIKQATGIEDGELRRTLQSLACGKARVLTKSPKGKDVEDGDKFTCND
DFRHKLFRIKINQIQMKETVEEQASTTERVFQDRQYQIDAAIVRIMKMRKTLSHNLLVSE
VYNQLKFPVKPADLKKRIESLIDRDYMERDKENPNQYNYIA
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atgatcacttccggtttctcttcccccaaccccccagcagcagctcaggaggtcagacct
gccactgatggtaatagcagcagcagctcctcctgcaagaagagaaagttaaacaacagc
agcaacaactctgaaagagaagagtttgattccatttcttcctgctcctcttctccttcc
aaaaataattcatcatcatcttcctccatcatcaccacctcgtctgggggcccatcatcc
aaccatcacctgcagaagaagctgcgctttgaggactccttggattttattggacttgat
gtgaagatggctgaagagtcttcctcatcttctcctgctgcctcttctcagcagcagcac
cagcaacagcttaaaaataaaagccttttaatttcttcagtggctgtggggcaccatgca
aatggcttgaccaaagctgcctcctctactgtctccagtttcgccaacagtaaacctggc
tctgccaagaagttagtgatcaagaactttaaagataaacctaaattgcctgaaaactac
acagatgaaacctggcaaaaactgaaagaagctgtggaagctatccagaacagtacttca
attaagtacaatttagaagagctctatcaggctgtggaaaatctctgctcctacaagatt
tctgcaaatttgtataaacagttgagacagatttgtgaagaccacattaaagcacaaatt
caccagttcagagaggattcgctggacagtgttctttttctaaagaaaatagacaaatgt
tggcaagatcactgcagacaaatgatcatgattaggagtatctttttgttcctggatcga
acttatgttcttcaaaattcaatgctgccatctatttgggatatgggtttagagttgttt
aggactcatataattagtgatcagaaagttcagaacaagactattgatggcatccttctc
ctgattgagagggaaagaaatggtgaagctattgataggagtttgctccgaagccttcta
agtatgctttctgatttgcagatttatcaagattcttttgaacatagattcttggaagaa
actaatcgtctgtatgcagcagagggacagaggcttatgcaagaacgagaggttccagag
tatcttcatcatgtcaacaagcgattagaagaagaagcagacagaattatcacgtatttg
gatcagagtacacagaagccactaattgctactgtagaaaagcaactgctaggtgaacat
ttaacagccattcttcagaaaggtttaaaccaccttcttgatgaaaacagaattcaagac
ttatctcttttgtatcagttgttcagtcgggtcagaggtggagtgcaagttctcttacag
cattggattgaatacataaaggcatttggtagcactatagtaattaacccagaaaaagac
aaaactatggtccaagagctgctagactttaaggataaagttgaccatattattgatgtc
tgttttctgaagaatgagaaatttgtcaatgccatgaaagaagcatttgaaaccttcatt
aacaagagaccaaataaaccagctgaactgatagctaagtatgtggattcaaagcttcgt
gctggcaacaaagaagctactgatgaagaacttgaaaaaatgctggataaaattatgatt
atatttaggttcatttatgggaaagatgtctttgaggccttttataagaaagacctagca
aagcggctgttggttgggaagagtgcatcggtagatgcagaaaaatcaatgctttccaaa
ctcaaacatgaatgtggagctgctttcaccagcaaacttgaaggaatgtttaaagatatg
gaactttcaaaagacatcatgatacaatttaaacagtatatgcaaaatcagaatgtacct
ggcaacattgaactaacagtgaacatcctgactatgggctattggccaacctatgtgcct
atggaagtccacttaccaccagagatggtaaaacttcaggagatcttcaaaaccttttac
ctgggaaaacacagtggtagaaaacttcagtggcaatcaacactaggtcactgtgtgcta
aaagcagaatttaaagagggcaagaaagagctgcaagtctctctgttccagacactggtg
ctacttatgtttaatgaaggagaggagttcagtttagaggaaataaagcaagctactggg
atagaggatggagagttaaggagaacactccagtcattagcctgtggcaaagccagagta
ctgactaaaagtcccaaaggcaaagatgtggaagatggtgataaatttacatgcaatgat
gatttcagacacaagctcttcaggataaagataaaccaaatccagatgaaagaaacggta
gaggaacaggcaagcactacagagagagtatttcaggaccggcagtaccagattgatgca
gcaattgtgcgaatcatgaagatgcgcaagactctgagccacaatttgcttgtgtcagag
gtgtacaaccagcttaaattcccagtaaagcctgctgaccttaagaagagaatagaatcc
ttaattgacagggactacatggaaagagacaaagagaacccaaaccagtacaactatatt
gcataa
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