Carettochelys insculpta (pitted-shelled turtle): 142020272
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Entry
142020272 CDS
T11194
Name
(RefSeq) uncharacterized protein LOC142020272
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Pathway
ciz03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
142020272
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ciz03019
]
142020272
Messenger RNA biogenesis [BR:
ciz03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
142020272
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fip1
TSX
Motif
Other DBs
NCBI-GeneID:
142020272
NCBI-ProteinID:
XP_074864086
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Position
13:complement(22039948..22084593)
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AA seq
556 aa
AA seq
DB search
MATELEPPASGAAPLEAEEDEEQWLYGDDTTGKQEDGLIAEHVESSHPLQDVPQESRPVT
CEDREMSQQALPSGEDDEEDSDSDSDDDDVKVTIGNIKTGAPSYMGTPMNLNLKTGRGYG
TSSSAKLQPKGIDLDATGNINGLPVIEVDLDSFEDKPWRKPGADLSDYFNYGFNEETWKA
YCEKQRRLQLGLDPSPPINSENKITVQQGRTGNAEKEPENSIIKTDFKTDFVTLVGGRMK
AGPPPNRKLGGTIDVIGGQAGTIRRVEGRRRDKHASEENPIQVLGDHGNKPQPPQQPQQP
SQPQQPPQQQPFAPPAGPPPPPIAGPPPPHFLHPPPPVTSVPPPLHPPGLPPPGPIPGLF
PPPLAPPPALLIPTLDGQPAGYNNRQPPPFGYSSADSGFISYPPISTSHTPWVTTVDKGT
SSSSSSHWEYSGSRRERERERERERERDRDRTPTTSEYNNDDERYRYYSRERSYDFERDY
RRSRDRSREREDRHRERRHREKEESSKHKSSRRKQHESEEGESHRRHKHKKNKRSKEEKE
ASDEGVAEGDEQDAKE
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggccactgagctggagccccctgcctcgggcgcggcgccgctggaggcggaggaggac
gaggagcagtggctgtacggcgatgacactactggtaagcaagaagatggactaattgct
gaacatgtagaatcttctcatcctttgcaagatgttcctcaggagagccgtcctgttacc
tgtgaagaccgagagatgtcacaacaagccctgccaagtggtgaagatgatgaggaagac
agcgatagcgacagtgatgatgatgatgtgaaagttacgattggcaacattaaaacagga
gcaccatcctacatggggacccctatgaatctaaacttaaaaacaggcagaggctatgga
acatcctcttcagccaagttgcagcccaaaggtattgatctagatgccacagggaatata
aatggattgcctgtaatagaagtggatttagattcgtttgaagacaaaccgtggaggaaa
ccaggtgccgacctttcagattactttaattatggattcaatgaagaaacatggaaagct
tattgtgaaaagcaacgacggctgcagcttggactggacccctctccacctatcaacagt
gaaaataagatcacagtgcagcaaggaaggacaggcaatgcagagaaagaaccagagaac
agcattatcaaaacggattttaaaacagactttgtgactctggttggagggcgcatgaag
gctgggcctccacctaacaggaagctgggtgggacaattgatgtgattggtggacaggca
ggcactattaggagggtagaaggaagacgccgcgataaacacgcctctgaggaaaatccc
attcaggttcttggagatcatggaaataagccacagcccccccagcagccccagcaacca
tcacagccccagcagccacctcagcaacagccatttgcaccgccagcaggccccccacct
cccccaattgctgggccaccccctccacactttctccaccctccccctccagttacttct
gtcccacctcctctgcatcctccaggtttgcccccaccaggtcccattccagggctattc
cctccccctctggctcctccaccagctctcctcattccaacacttgatggccagccggct
ggctacaacaacaggcagcctccaccatttggatacagctctgcagattccggtttcatc
agctatcctcccatctctacgtctcacacgccctgggtgacgacagtggacaagggcaca
agcagttccagcagcagccactgggagtactccggctcaaggcgggagcgagagagggaa
cgggaaagagaacgggagagggaccgagaccgaactccaaccaccagtgaatacaacaat
gatgatgagcgatatcgctactacagtcgagagcgaagctatgattttgagcgggattac
cgcaggagtagagatcggagcagggagcgtgaggatcgccaccgggaacgcaggcacaga
gaaaaggaggagagcagtaaacataagtcttcaagacgtaagcagcatgagagtgaagag
ggtgaaagccaccggcggcacaagcacaaaaagaacaagcgcagcaaagaggagaaagag
gccagcgatgagggtgttgcagagggagatgaacaagatgctaaggagtga
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