Carettochelys insculpta (pitted-shelled turtle): 142020328
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Entry
142020328 CDS
T11194
Symbol
ATRX
Name
(RefSeq) transcriptional regulator ATRX isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Pathway
ciz04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
142020328 (ATRX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ciz03000
]
142020328 (ATRX)
03036 Chromosome and associated proteins [BR:
ciz03036
]
142020328 (ATRX)
Transcription factors [BR:
ciz03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
142020328 (ATRX)
Chromosome and associated proteins [BR:
ciz03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
142020328 (ATRX)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
ATRX_C
ADD_ATRX
Helicase_C
Motif
Other DBs
NCBI-GeneID:
142020328
NCBI-ProteinID:
XP_074864169
LinkDB
All DBs
Position
13
Genome browser
AA seq
2436 aa
AA seq
DB search
MTAEPMSENKLNTLVQKLHDFLAHSSEESEDTNSPPRLSMSKSIGKSSGPENSPTLMENS
REEGNSSSERSKSLGSSRSKRKPSVVTKYVGSDDEQILTETINEDVSNENSENDVDMKSL
PKGTVVVQPEPVLNEDKDDFKGPEFRSRNIVKMKPEAPKKRGDVVLNRVIKRKYHPNVLS
LPPEEGLHGIVSCTACGQQVNHFQKDSIYRHPTLKVLICKTCFKYYMSDDISRDSDGMDE
QCRWCAEGGNLICCDFCHNAFCKKCILRNLGRKELSAIMDENNQWHCYSCHPEPLLDLVT
ACDSVFENLEQLLQQNKKKIRVECEKSKIYDHTIKFSPKRNISNCNGEEKKLDDSYSGSL
TYSYKALMVPKDMLKKTKKLVETTTNMNASFISFLKTAENSEVNPTIQLRQLKAFKSVLS
DIRKTHLALEEGLNQEIQALAIKIKEKNNKERKTDVKPEKNEGKIDERKEHAELKEDTVK
LIKKAVSEQPENEPMDQSVPATQKTENKHTNNEDKKSETNEEPQYEPNSTEALDMDIVSV
PSSVPEDIFETLESAMETQSTADEQANGSTAAELETINVNRKCTTPSKDFRGSTKLKASA
KVRKELFVKLTPVSLSDSPVKPEDQASNQVKRDKNADVISKVENSDSGKENHDIGNECSL
ENINVSFVEESDLRRSPRMKTTPLRRQTDINPLTSNSEEDSNDAYCEKGKRKSSVQSRRK
KDKRNSSDNTNDHPKSKLSKSKQSDILDQSSGSDEMPAVLKKVAMMSHSSSDIDSNSETY
CNVQQNALNDLKKQPVNYENGKRKRKSSTSGSDLDTKKGKSTKGSTSAKKKRQNPSDSSN
YDSELEREIRSLSKIESAKRAKKKYPSKKENYDSSEGEQNKKGNTSRKKINFKKQQVESS
DDAEISSPEKEEMTHSSDDKKIKKGTAVSEKKNRDLKEKTSEGKHDESSDTEKSSLEKEE
SCHSSSDDKKRAEAKEKKNTDLKKRKVQDDSSLDGMEKSPEKEQRCDSSEDKIKNKESES
KEDLKKEKNKEKDGSSSDEDKSFLEKESCISSENKSKNQVAAEEKRERNLRERISKKLQS
DSSSDAEKSPQKEESSSEDVKRNKKRVKAKEKKVSHKRKTSRKEQSDSSSDEELYEDQKK
SKKASSKENKKGNLKEKKRISRKQKEVTCSSSSDEEENDDQNSDDGSSDEQKIKPVTESL
MLSPNTGFCQSSGDEGETKSGAVPEEEEEEDDDPENRIAKKMLLEEIKANLSSDEDASSD
EESDKGKRKTGKKNEIAEDDEDHDNEDNSESDSDEEESKKPRYRHRLLRHKLSMSDGESE
DGTKGKSKDPKEGKRRNRRKVSSDDSDDTEFHESGVSEEVSESEDEQRPRTRSAKKAEAE
ENQRSYKQKKKRRRIKVQEDSSSENNKSNSEEEDDNDSKSPGKGRKKIRKILKDDKLRTE
TQNALKEEEERRKRIAEREKEREKLREVIEIEDASPLKCPITTKLVLDEDEETKEPLVQV
HRNIVTKLKPHQVDGVQFMWDCCCESVKKTKKSAGSGCILAHCMGLGKTLQVVSFLHTVL
LCDKLDFSTALVVCPLNTALNWLNEFEKWQESLEDDEKLEVSELATVKRPQERAYMLQRW
QEEGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGPDFVVCDEGHILKNEASAVS
KAMNAIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSIKEFRNRFINPIQNGQCADS
TMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKYEYVLAVRMTPIQCKLYQYYLD
HLTGVGCSSEGGKGKAGAKLFQDFQMLSRIWTHPWCLQLDYISKENKGYFDEDSLDEFIA
SDSNESSMSLSSDDYAKKKKSKGKKGKKDSSSSGSDNDVEVIKVWNSRSRGGGEGNTEEF
VNNPPLASKSEEGKAATSSNPGSPAPDWYKDFVTDADAEVLEHSGKMVLLFEILRMAEEL
GDKVLVFSQSLISLDLIEDFLELASRDKTDKDKPVIYKGEGKWFRNIDYYRLDGSTSAQS
RKKWAEEFNDETNVRGRLFIISTKAGSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRF
GQNKPVFVYRFLAQGTMEDKIYDRQVTKQSLSFRVVDQQQVERHFTMNELTELYTFEPDL
LDDPNSEKKKKRDTPMLPKDTILAELLQIHKEHIVGYHEHDSLLDHKEEEELTEEERKAA
WAEYEAEKKGLTMRFNMPVGTNMPPTNFNTQTPYIPFNLGALSAMSNQQLEDLINQGREK
VVEATNNVTAVRIQPIEDIISSIWKENLTLTETEVQALALSRQASQELDVKRREAIYNDV
LTKQQMLISCVQRILMNRRLQQQYNQQQQQQMSYQQAAMSHLMMPKPPNLIMNPSNYQQI
DMRGMYQAVSSGMQPPPLQRAPPPMRGKNPGPSPGK
NT seq
7311 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcggagcccatgagtgaaaacaagttgaacacattggtgcagaagcttcatgac
tttttggctcactcatctgaagaatctgaagacacaaactctcctccaagattatctatg
agcaaaagtataggtaaaagtagtggacctgaaaatagtccaactctgatggaaaacagc
agggaagagggaaatagctcttcagaaagatcaaaatctttgggatcatcacgttcaaaa
aggaaaccttcagttgtaacaaagtatgttggatcagatgatgagcaaatcttaactgaa
acaataaatgaagatgtttcaaatgaaaactcagaaaatgatgttgatatgaaaagctta
ccaaaaggtacagtggttgtacaaccagagccagtgctgaatgaagacaaagatgatttt
aaagggcctgaatttagaagcagaaatatcgttaaaatgaaacctgaagctcctaaaaag
cgtggagatgtggtgctgaacagggttataaagcgaaaataccatccaaacgttcttagt
cttcctcctgaagaaggactgcatggaattgtaagctgtacagcctgcgggcaacaggtg
aaccattttcagaaggattcaatctatagacatcctacactgaaagttcttatctgcaag
acttgcttcaaatattatatgagtgatgacattagccgggattcagatggtatggatgaa
cagtgtagatggtgtgctgaaggtggaaacttaatctgctgtgacttttgccataatgcc
ttctgcaaaaagtgcattttgcgcaacctgggccgaaaggagctgtcagccataatggat
gaaaataaccaatggcattgctatagttgccacccagaacctttactggacttggtcact
gcatgtgacagtgtttttgaaaatttagaacagttattgcaacaaaacaaaaagaagatc
agagtcgagtgtgaaaaaagtaaaatatatgatcacacaatcaaattttctccaaagaga
aatatttcaaattgtaatggagaagaaaagaaattagatgactcttattctggttcttta
acctattcctataaagcactaatggtgccaaaagacatgctgaaaaagacaaaaaaactg
gttgagaccacaacaaatatgaatgctagttttataagttttttgaaaacagcagaaaat
tcagaagtaaatcctaccatacaactgcgtcagctgaaagcttttaaatctgtgttgagt
gacataagaaaaactcacttagcattagaagaaggtctgaatcaagagattcaagcttta
gctattaaaatcaaagagaagaataacaaagagagaaaaactgatgttaaaccagaaaaa
aatgaggggaaaatagatgaaagaaaggaacatgcagagttgaaagaggacactgtgaag
ttaattaaaaaagctgtgtcagaacagcctgaaaatgagcccatggaccaaagtgttcca
gcaacacaaaaaacagaaaacaagcatactaacaatgaagacaaaaagtcagagacaaat
gaagagcctcagtatgaacctaatagtactgaggctttagacatggacattgtgtctgtt
ccttcatcagtccctgaagatatctttgaaactctagaatctgctatggaaacgcagagt
acagcagatgaacaagccaatggaagtacagcggcagagctggagacaataaatgtgaat
agaaaatgtactacaccatcaaaagactttagaggaagtaccaagttaaaagcatcagct
aaagtaagaaaagaattgtttgtaaaactgactcctgtctccctttctgattctccagtt
aaacctgaagatcaagccagtaatcaagtaaagagagacaagaatgctgacgtaatatcc
aaggtagaaaactctgattctgggaaagaaaatcatgacataggtaatgaatgttcactt
gaaaatataaatgtttcctttgtagaagaatctgatctcaggaggtccccgcgtatgaag
accacacctctgaggcgtcaaacagacattaatcctttaacatctaattcagaagaggac
agcaatgatgcttactgtgagaagggcaagcgaaaatcatcagtccagtcaaggagaaaa
aaagataaaagaaattcttctgacaatactaatgatcaccctaaatctaagctttctaaa
tccaaacaatcagacatattggaccaaagttcgggttcagatgagatgccagcagtcctt
aaaaaagtagctatgatgagtcatagttcctcagatattgatagcaatagtgagacatac
tgtaatgttcagcagaatgccttaaatgatctaaaaaaacagccagtgaactatgagaat
ggaaaacgcaaaagaaaaagctccacatctggttctgatttagatactaaaaaaggcaaa
tcaacgaaaggttcaacttctgcaaaaaagaaacgtcaaaacccttcagattcttcaaat
tatgactcagagttagaaagagagataaggagtttgagtaaaatagagtctgcaaaaaga
gccaaaaagaagtaccccagtaaaaaagaaaattatgattcttctgaaggtgaacagaat
aaaaaaggaaatactagtaggaaaaagataaattttaagaagcagcaggttgaatcatct
gatgatgctgagatatcatctccagagaaagaggagatgactcattcctctgatgacaaa
aaaataaagaagggaacagcagtcagtgaaaagaaaaacagagatttaaaagaaaaaact
tcagaggggaagcatgatgaatcatctgatactgagaagtcatccctggagaaagaggag
agttgccattcttcttctgatgataaaaagagggcagaagcaaaagagaagaaaaacaca
gatttgaaaaagagaaaggtacaggatgattcttccttggatggaatggaaaagtcgcca
gagaaggagcagagatgtgattcttcagaagacaaaatcaaaaataaagaatcagaaagt
aaggaagatttgaaaaaggagaaaaacaaagaaaaagatggctcttcttctgatgaagat
aagtcattccttgaaaaagagagttgcatttcctctgaaaataaaagtaaaaatcaagtg
gctgctgaggaaaagagagagagaaatttgagggagagaatttcaaagaagttacagagt
gattcatcttcagatgctgagaagtccccacagaaagaggagagttcttctgaagatgtt
aaacggaataaaaaaagagtaaaagctaaagaaaaaaaagtaagccacaaaaggaaaact
tccaggaaggaacagagtgactcatcatctgatgaggaactttatgaagaccaaaagaag
agtaaaaaggcatcatccaaggaaaataaaaagggtaacttgaaagagaaaaaaagaatt
tctaggaaacagaaagaagtcacctgttcctcctcatcagatgaggaagaaaatgatgac
cagaattcagatgatggaagcagtgatgagcagaagattaagccagtgactgaaagttta
atgctgtcccccaacacaggattttgtcaatcttcaggggatgaaggagagactaaatca
ggggctgttccagaggaggaggaggaggaggatgacgatcctgagaatagaattgccaag
aaaatgcttttagaagaaatcaaagccaatctttcctctgatgaggatgcatcttcagat
gaagaatcagataaaggaaaaaggaaaactggaaagaaaaatgaaatcgcagaagatgac
gaggatcatgacaatgaagataattctgaatctgattcagatgaggaagagtctaagaaa
cctagatacagacacagactgctgcgacacaaactaagtatgagtgatggagaatctgag
gatggaacaaagggaaaatctaaagacccaaaagaaggcaaacgcagaaatagaaggaaa
gtgagcagtgatgattcagatgacacagaatttcatgagtctggagttagtgaagaagtc
agtgaatctgaggatgaacagcgtcctagaacaagatctgctaaaaaagctgaggcagaa
gaaaatcagcgcagttacaagcagaaaaagaaaagacgacgaataaaggttcaggaggat
tcttctagtgaaaataataagagtaattctgaggaagaagatgacaatgattcaaaatct
cctggaaaaggccggaagaaaatacgaaagattcttaaagatgataagcttagaacagaa
acacaaaatgcactgaaggaggaggaagagagaagaaaacgtattgcagaaagagaaaaa
gagagagaaaaattaagagaggtgatagaaatagaagatgcttcacctctgaagtgtcca
atcacaactaaactggttttagacgaagatgaagaaaccaaagaacctttggtacaggtt
cacagaaacatagttaccaaactgaaaccacatcaagtagatggtgttcagttcatgtgg
gattgctgttgtgaatctgtgaaaaaaacaaagaaatctgcaggttctggatgcattctt
gcccactgcatgggtctgggaaaaacattgcaggtagttagttttctccatacagttcta
ttgtgtgataaactggattttagcacagctcttgtggtgtgtccactcaacactgccttg
aactggctaaatgagtttgaaaaatggcaagaaagtttagaagatgatgagaaactagag
gtctctgaactagcaactgtaaaacgccctcaggaaagagcctatatgctgcagcgatgg
caggaagaaggaggagttatgatcataggctatgagatgtaccgtaatcttgcacaaggc
aggaatgtgaaaagtagaaaacttaaggaaatatttaacaaggctctggttgatccaggc
cctgacttcgttgtatgtgatgaggggcacatattaaaaaatgaagcttctgctgtttcg
aaggctatgaatgctatccgatctaggaggaggataattctcacaggaacaccactgcag
aataatcttatagaatatcactgcatggttaattttatcaaggaaaatttgcttggatca
attaaagaattcagaaatcggtttataaatccgattcagaatgggcagtgtgcagactcc
accatggtagatgttagggtaatgaagaagcgtgctcacatactatatgagatgctcgct
ggatgcgttcagaggaaggattacacagcattaacaaagttcctgccaccaaaatatgaa
tatgttttagcagttagaatgacacctattcagtgtaagctctatcagtattacttggat
cacttgacaggtgtaggttgcagcagtgaaggtggaaaaggtaaagctggagctaagctc
ttccaggacttccagatgttaagcagaatctggactcacccttggtgtttacagctggac
tatattagtaaagaaaataagggctacttcgatgaagacagtttggatgaattcatagct
tctgattcaaatgaatcttcaatgagtttaagctctgatgattacgctaagaaaaaaaaa
tccaagggaaaaaaaggaaagaaagatagtagttcaagtggaagtgataatgacgttgaa
gtgattaaagtctggaattcaagatcccgtgggggtggagaaggaaatacagaggaattt
gtaaacaaccctccattggcttcaaagtcagaagaaggtaaagctgcaacctcttctaac
ccaggcagcccagcacctgactggtacaaagattttgtcactgatgcagatgctgaagtg
ttggaacattctgggaaaatggtgcttctctttgaaattcttcgcatggcggaagagctt
ggggacaaagttttagtttttagccagtctctgatatcactggatttgatagaagatttt
ctggaactggcaagcagggacaaaactgacaaagataagcctgttatttataaaggtgaa
ggaaaatggttcagaaatattgattactatcgtttagatggttcgacttcagctcagtca
aggaagaaatgggctgaagaatttaatgatgaaactaatgtgagaggccgtttgtttatt
atttccaccaaagcgggatctcttggaattaatttggtggctgctaatagagtgattatc
tttgatgcatcttggaatccatcctatgatattcagagtatctttagggtttaccgcttt
gggcagaacaaacctgtttttgtgtacagattcttggctcagggaacaatggaggacaag
atatacgatcgtcaagtaacaaagcaatcactgtctttccgagtggttgaccagcagcag
gttgagcgccactttactatgaatgagcttacagagctctatacttttgagccggacttg
ctggatgaccctaattcagaaaagaaaaagaagcgggatacacccatgctgccgaaggat
acaattctagcagaattgcttcagatccacaaagaacatatagtaggctatcatgagcac
gactccctgctagaccataaagaggaggaagaattgaccgaagaggaaagaaaggcagca
tgggcagaatatgaagctgaaaagaagggtctgaccatgcgcttcaacatgccggttggt
actaatatgccccctaccaatttcaacactcaaactccatatattccgttcaatttggga
gcattgtcagccatgagtaaccaacagctggaggacctcattaatcaaggaagagaaaaa
gttgtggaagcaaccaacaatgtaactgcagtgagaattcagcccattgaagatataatt
tcatctatatggaaggaaaatctgaccttgacagagacagaagtacaggccttggcacta
agcaggcaggcaagccaggagcttgatgttaagcgccgagaagccatctacaatgatgtc
ttgacaaaacaacagatgttaatcagttgtgttcagcggatacttatgaacagaagacta
cagcagcagtacaatcagcagcagcagcagcaaatgtcttatcaacaagcagcaatgagt
catctcatgatgccaaagcctccaaatctcatcatgaatccttccaactaccagcagata
gatatgagaggaatgtatcaggcagtgtctagtggtatgcagccaccaccattgcagcgt
gcaccacccccaatgagaggcaaaaatccaggaccttccccagggaaataa
DBGET
integrated database retrieval system
