Carettochelys insculpta (pitted-shelled turtle): 142020473
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Entry
142020473 CDS
T11194
Symbol
VPS35
Name
(RefSeq) vacuolar protein sorting-associated protein 35
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Pathway
ciz04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
142020473 (VPS35)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ciz04131
]
142020473 (VPS35)
Membrane trafficking [BR:
ciz04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
142020473 (VPS35)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
FerA
Motif
Other DBs
NCBI-GeneID:
142020473
NCBI-ProteinID:
XP_074864406
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Position
14:19597541..19645369
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AA seq
796 aa
AA seq
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MPTTQQSPQDEQEKLLDEAIQVVKVQSFQMKRCLDKNKLMDALKHASNMLGELRTSMLSP
KSYYELYMAISDELHYLEVYLTDEFAKGRKVADLYELVQYAGNIIPRLYLLITVGVVYVK
SFPQSRKDILKDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPDEGEQTDEETTGDISDSM
DFVLLNFAEMNKLWVRMQHQGHSRDREKRERERQELRILVGTNLVRLSQLEGVNVERYKQ
IVLPGILEQVVNCRDALAQEYLMECIIQVFPDEFHLQTLNPFLRACAELHQNVNVKNIII
ALIDRLALFAHREDGPGIPADIKLFDIFSQQVATVIQSRQDMPSEDVVSLQVSLINLAMK
CYPDRVDYVDKVLETTVEIFNKLNLEHIATSSAVSKELTRLLKIPVDTYNNILTVLKLKH
FHPLFEYFDYESRKSMSCYVLSNVLDYNTEIVSQEQVDAIMNLVSTLIQDQPDQPAEDPD
PEDFADEQSLVGRFIHLLRSDDPDQQYLILNTARKHFGAGGNQRIRFTLAPLVFAAYQLA
FRYKENSKVDDKWEKKCQKIFSFAHQTISALIKAELAELPLRLFLQGALAAGEIGFENHE
TVAYEFMSQAFSLYEDEISDSKAQLAAITLIIGTFERMKCFSEENHEPLRTQCALAASKL
LKKPDQCRAVSTCAHLFWSGRNTDKNGEELHGGKRVMECLKKALKIANQCMDPSLQVQLF
IEILNRYIYFYEKENDAVTVQVLNQLIQKIREDLPNLESTEETEQINKHFHNTLEHLRLR
RESPESEGPIYEGLVL
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgccaacaacgcagcagtctcctcaagatgagcaggaaaaactcctggatgaagccatt
caggttgtaaaggtccagtctttccagatgaagcgatgcttggacaaaaataagcttatg
gatgctctgaaacatgcctccaacatgcttggtgagctgcggacttctatgctgtctcca
aagagctattatgaactctatatggctatttctgatgaactacattatctggaggtatat
ctgacggatgaatttgccaagggaagaaaagtggcagatctttatgaactagtacagtat
gctggaaatataatcccaagactctatctactgataacagtaggagttgtctatgtcaag
tcctttcctcagtccagaaaagatatcctgaaagatctggtggaaatgtgccgtggtgtc
cagcatcctctaagaggcttgtttcttcgaaactaccttcttcagtgcaccaggaatatt
ttaccagatgaaggggaacagacagatgaagaaaccactggggacatcagtgattccatg
gattttgtgttgctgaactttgctgagatgaacaaactctgggtgcggatgcaacaccaa
ggacacagtcgagatcgagagaaaagggagcgggaaaggcaggaactgagaattctggtg
ggaacaaacttggtacgccttagtcagttggaaggcgttaatgtggagaggtataaacag
attgttttgcctggaatattggagcaagtagtgaactgcagggatgctctagcacaggag
tatctcatggaatgtattattcaggttttcccagacgaatttcatctccagaccttgaat
ccttttctccgagcctgtgcagaattgcaccaaaatgtgaatgtgaaaaacattattatt
gctttaattgacaggttagctttatttgctcaccgtgaagatggaccagggatcccagca
gacattaagctttttgacatcttttcacagcaggtggccactgttatacagtctagacaa
gacatgccttcagaggatgtggtgtcattacaagtatcgcttattaacctagctatgaaa
tgctatccagatcgtgttgactatgttgataaagtgttggagacaactgtggaaatcttt
aataaacttaatctggagcatatagcaacaagcagtgctgtttcaaaagagctaactaga
cttctgaagattccagttgatacatacaacaatatcctgacagttctgaaactaaagcat
ttccacccactcttcgaatactttgattatgagtccaggaagagcatgagttgttatgtg
cttagcaatgtactggattataacacagaaatcgtgtcccaagaacaggttgatgcaatt
atgaatctggtatcaacgctgatccaggatcaaccagatcagcctgctgaagatcctgac
cctgaagactttgctgatgagcagagccttgtgggaaggttcattcatcttctacgttca
gatgaccctgatcaacagtatctgattttaaacactgcccggaaacactttggtgcaggt
gggaaccaacgtattcgtttcacattggcacctttggtttttgctgcttatcagcttgcc
tttcgctacaaggagaattccaaagtggatgacaagtgggaaaagaaatgccagaagatc
ttctcatttgcacatcagaccatcagtgcgctgatcaaggcagaattggcagaactgcct
ctgcggctttttctacaaggagctctggctgctggggaaattggttttgaaaatcatgaa
acagtggcctatgaatttatgtcccaggcattctctctgtatgaagatgaaatcagtgat
tcaaaagcacagctggctgcaatcaccttgataattggaacatttgaaaggatgaaatgc
ttcagtgaggagaaccatgagcctttgaggactcagtgtgcactggcagcttcaaaactg
cttaagaagccggaccagtgccgggctgtaagcacttgtgcccatctcttttggtctggc
cgaaacactgacaaaaatggagaggagcttcatggaggaaagagagtaatggaatgcttg
aaaaaggctctaaagatagcaaatcagtgcatggatccttcacttcaagttcagcttttt
atagaaattctgaacagatatatctatttttatgaaaaggaaaatgatgcggtgacagtt
caagttttgaatcagctcatacaaaagatacgagaagaccttccaaaccttgaatctact
gaagaaacagaacaaattaataaacattttcataacacactggagcacctgcgtttgagg
cgggaatcaccagaatctgaagggccaatttatgaaggtcttgtcctttaa
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