Carettochelys insculpta (pitted-shelled turtle): 142020509
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Entry
142020509 CDS
T11194
Symbol
CHD9
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 9 isoform X1
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ciz03036
]
142020509 (CHD9)
Chromosome and associated proteins [BR:
ciz03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
142020509 (CHD9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
HDA2-3
HTH_CHD1_Hrp3
Motif
Other DBs
NCBI-GeneID:
142020509
NCBI-ProteinID:
XP_074864491
LinkDB
All DBs
Position
14:complement(12977199..13289636)
Genome browser
AA seq
2882 aa
AA seq
DB search
MTDPMMDFFDDANLFSETLEGLSDDAFVQPGPVSLVDELNLGAEFEPLHIDSLNHVQDTQ
TQQKMNEFEQLNQFESLKLQVNQSYGSPADSVLSPHTQFNCSPIHPQNQSNGMFPDVADG
SPMWGHQTTPTVPNQNGSPFHQGHSQSMQQNKTFVAHHDFALFQANEQQHQRASLQSQQN
RNNINTGQDALSLPKNFMEVNVSAPHRASVTHPPQIANPSTSQQPLSVQQFSQNPSASIH
FCGNQEGNFDGQSPAMTPCSVNSTQQFSSPYSYSNNHVSPSSLLQSSTALSASQQTHPLS
DYTGSDAFTSQTGNKQETTEHLLNPNTPLNSNSFQMLHSAHPQGSFSSSKLSPVNINFPA
SAGSASQISHFSDPIESNGFSSLDENLLHQVESQAEPFTGLDPEDLLQEDLLPQFDDSAF
VQDASSHILEHDIEHHITQSSDIVQTQSQSQMHPWHSSVSNRHLQDRNRLALPGQPPSSK
KTDVSGTYTKLQNSQVRGMSEKKQKKKVETESKQEKANRIISEAIAKAKERGERNIPRVM
SPENFPSVSAEGREEKKGRKLKSKPKDKESKKPKTVSSSKIKDKSKIGKLIITLGKKQKR
KNESSDEMSDTKQTPQQSFKDEDSQKRRSNRQVKRKKYAEEGEGKQSEEEAKVSVKIKKS
SAPLPAEQPLQLFVENPSEEDAAIVDKILSSRIVKKEISEGMTMEEEEFFVKYKNYSYLH
CEWATEQQLLKDKRIQQKIKRFKLRQAQRAHFFADMEEEPFNPDYVEVDRVLEVSFCEDK
DTGEPVVYYLVKWCSLPYEDSTWELKEDVDQAKIEEFEHLQASRPDSRRLDRPPPNAWKK
IEQSREYKNGNQLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITFLYEILLTGI
RGPFLIIAPLSTITNWEREFRTWTDLNVVVYHGSMVSRQMIQQYEMYFRDSQGRIIRDTY
RFQAIITTFEMILGGCPELNAIEWRCVIIDEAHRLKNKNCKLLEGLKLMNLEHKVLLTGT
PLQNTVEELFSLLHFLEPLRFPAESTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVE
KKLAPKEETIIEVELTNIQKKYYRAILEKNFAFLSKGAGQTNVPNLVNTMMELRKCCNHP
YLIKGAEEKILGEFRETHSPTAPDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQM
VRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKRDSDRFVFLLCTRAGGLGINL
TAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLITRNSYEREMFDRASLKLGLD
KAVLQSMSGRENSVGGIQQLSKKEIEDLLRRGAYGAIMDEEDEGSKFCEEDIDQILQRRT
KTITIESEGRGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAEIDIDAISGRNSLVIDT
PRIRKQTRPFSATKDELAELSEAESEGDDKPKLRRPCDRSSGYGRTECFRVEKNLLVYGW
GRWREILSHGRFKRQLNEQDVEIICRALLAYCLVHYRGDEKIKSFIWDLITPTEDGQTRE
LQNHLGLSAPVPRGRKGKKVKTQASTFDIHKAEWLRKYNPEHLLQDEGYKKHIKHHCNKV
LLRVRMLYYLKQEVIGNECQKVFDGVDSSEVDVWVPEPEHSEVPAEWWDADADKSLLIGV
FKHGYEKYNTIRADPALCFLERVGKPDEKAVAAEQRANDYIDGDVEDPEYKPAPAMFKDD
IEDDASSPGDLVIADGDGQMMEGDKIYWPTQSALTTRLRRLITAYQRTSKNRQAQQIQPV
FPVQATVMQPPYEEAALNPKMAAKIERQQRWTRREEADFYRVVSTFGVVFDPERGRFDWT
KFRAMARLHKKTDDSLEKYLYAFMSMCRRVCRLPSKEELVDPTICIQPITEERASRTLYR
IELLRKVREQALRHSQLFERLKLCQPNPDLPVWWECGAHDRDLLIGAAKHGVSRTDYHIL
RDPELSFMSAQRNYSQNKVALSRTSTPLLHQYQMALSASPLTPQSRLPDTKGNTLEDTKV
KNENLKEDSQSSEEEFMSTEETQTVMKSEPLSPKNGMPSQTVDHKPGVKTETDRRMVAAR
TEPLTPNPASKKQRVSKRGSDSSSDSDSDSDRSSCSSRSSSSSSSSSSSCSHSRSGSSSS
SSSSCSSASSSSSSSSSSSSSSSSSSSSEESDSDEEAQKRAEGNSHIKAYDEESVASLST
TLDETQDCFQLNNGTPNSSYLLQGGYMLAASYWPKDRVMINRLDSICQTVLKGKWPSARR
NYDSSTVASFYTTKLLDSPGAAADNSEPSAPTPPTVGVKEEYDQSPQMPKVKKHVREKEF
TVKINDEGGLKLTFQKQGFSQKRLFESEEGMLGQQQYLARLHELQNASETSLVNFPKSLP
ESDASSQLTASANGMIVDSQPVVKKRRGRRKNLGVDILFMNRDKPPNHVNPSMNTSQVAP
IINQTFTYSQSQGLLDTESPVPVINLKDGTRLAGDDAPKRKDLEKWLKEHPGYVEDLGAF
IPRMQLHDGRPKQKRHRCRNPNKLDINSLTGEERVQLINRRNARKVGGAFAPPLKDLCRF
LKENPEYGVAPEWGDVVKQSGFLPEGMFDRILTGPVVREEVSRRGRRPKSEIAKATAAAA
AATAANVSVNPLLANGLLPGMDLSTLQALQQNLQSLQVTAGLMGMPAGLTTGGEAKNMAT
MFPMLLSGMTGLPNLLGMGGLLTQSTESVSEDKRGNDSKEPDVKKERTEKQHADNGGEDS
VSSSPSTSSAAANPLALNPLLLSNILYPGMLLTPGLNLHISALSQSNIFDVQKTENNDTG
STKPTEKKEENSRVRDQEDKGGTAPNSHNENSTDEGSEKADASSGSDSTSSSSEDSDSSD
ED
NT seq
8649 nt
NT seq
+upstream
nt +downstream
nt
atgactgatcctatgatggatttttttgatgatgcaaacctttttagtgagacattggaa
ggtttgtcggatgatgcctttgtacaacctggacctgtttcacttgttgatgaattgaat
ttgggtgcagaatttgagcctttacacatagactctttgaaccatgtgcaagatactcaa
actcagcaaaagatgaatgaatttgagcagttaaatcagtttgagtcactgaaacttcaa
gtaaatcagtcttatggtagtccagctgacagtgttttatcaccacacactcaatttaat
tgctcaccaatccatccacaaaaccagtctaatggaatgtttcctgatgtggctgatggt
agtcctatgtggggtcatcaaactaccccgactgttccaaatcaaaatgggtctcctttt
caccaaggacattctcagtctatgcagcaaaataaaacttttgtagcacaccatgacttt
gccttatttcaggccaacgaacagcaacatcagcgtgcctcactacagtcacaacaaaat
agaaacaatattaacacagggcaagacgctctgagtctgccaaaaaactttatggaggtt
aatgtatctgctccacaccgggccagtgttacccatccacctcaaattgctaatccatct
acttcacagcagcctctctctgttcaacagttttctcaaaatcccagtgcttcaatacat
ttttgtggaaatcaggaaggaaactttgatggacagtctccagctatgactccttgctct
gttaatagtacacagcagttttcttctccatattcctactctaataatcatgtttctcct
tccagcctcctacagtcatctactgctctttctgctagccaacaaacgcatcctttatct
gattatactggaagtgatgcctttacatctcaaacagggaacaaacaagaaaccaccgag
cacctcttgaatcctaatacaccgttgaattcaaatagtttccaaatgttgcattcagca
catcctcagggcagtttcagtagttcaaaactctctcctgtgaacattaattttccagca
tctgctggttctgcttctcagataagccatttcagtgatcctatagaaagcaatggtttt
tcatcgttggatgagaacttacttcatcaagttgagtctcaagctgagccatttactgga
cttgatccagaggacctccttcaggaagaccttctaccccaatttgatgattcagcattt
gttcaggatgcttcaagccacatattagagcatgacatagaacaccatattacacagtca
tctgatattgttcagacacagtctcaaagtcagatgcatccttggcattcttcagtttct
aatcggcatttacaagacagaaatcgtctggccttaccagggcagcctccctcctctaag
aagactgatgtttcagggacatatactaaattgcagaattcccaggtgaggggaatgtct
gaaaaaaaacagaagaaaaaagtagaaacggaaagtaagcaggagaaggctaatcgaata
atatcagaggcaattgcaaaagcaaaagagagaggagagagaaacattccacgagtaatg
agccctgaaaatttcccaagtgtttcagctgaaggaagagaggaaaaaaaaggtagaaaa
cttaaatccaaaccaaaggacaaagagagcaaaaaaccgaaaactgtttcctcatcaaaa
attaaagacaaatcaaaaattggcaagcttataatcacattgggtaaaaagcagaagaga
aagaatgaatcttcagatgaaatgtctgatactaagcagactccacagcagtcatttaaa
gatgaggactctcagaagagaagatcaaatcgtcaagttaaaagaaaaaagtatgctgaa
gaaggagaaggaaaacagtcggaagaagaggctaaagtttcagtgaaaatcaaaaagagt
tctgctcctttgcctgctgaacaacccttacagttatttgtggagaatccaagtgaagaa
gatgcagcaattgtagataaaattttatcctccaggatagtgaagaaagaaatatctgag
ggaatgacaatggaggaagaagaattttttgtaaaatacaagaactactcctaccttcat
tgtgaatgggccacagaacagcagctactgaaggataaaagaattcagcagaaaattaaa
cggttcaagctgaggcaagcacaaagagcccacttttttgcagatatggaagaagaacct
tttaatcctgattacgttgaagtggaccgggtgttagaagtctccttttgtgaagataag
gacactggcgagcctgttgtttactatctagtaaagtggtgttcattgccatatgaagac
agcacttgggagttaaaagaagacgtagaccaggcaaaaatagaagagtttgaacatctg
caagcttccaggcccgactcaaggagattggaccgacctcctcctaatgcctggaagaag
atagaacagtccagggaatataaaaatggcaaccagcttagggaataccaacttgaagga
ctcaactggctcctttttaactggtacaatagacgaaactgcattttagcagatgaaatg
ggtcttggcaaaaccatccagtcaattacattcctctatgaaattctcctgactggtata
cgagggcctttcctgatcatagctccactttccacgataaccaattgggaaagagaattt
cgcacatggacagatcttaatgttgtggtatatcatgggagcatggttagcaggcagatg
atacagcagtatgagatgtacttcagggactcacaggggcgtataattcgagatacttac
cggttccaagctattatcaccacgtttgaaatgattcttggtggctgtccagaactaaat
gcaattgaatggcggtgtgttattattgatgaagcacacaggctgaagaataaaaattgc
aaactcctagagggactcaaactcatgaatcttgagcacaaagtactgttgacaggcaca
ccactgcagaacacagtagaagaactatttagccttcttcattttctggaacctttgcgt
tttcctgctgaatctacattcatgcaggaatttggggaccttaaaacagaggagcaggtg
caaaagctacaagctatcctgaaaccaatgatgctgagacgattgaaagaagatgtagag
aaaaagttagctcccaaggaagaaactataattgaagtagaactaacgaatatccagaag
aaatattatcgggcaattctggagaagaactttgcattcttgtcaaaaggagctggccaa
actaatgtacccaatcttgttaacactatgatggaactcagaaagtgctgcaatcaccca
tatcttatcaaaggtgctgaagagaaaatccttggggagtttagggaaacgcattcccca
actgctcctgatttccacctacaagcaatgatccagtcggctgggaaattggtcctcatt
gataaacttcttcctaaaatgaaagcaggaggccataaggtgcttattttctctcaaatg
gtgcgctgtctcgacatcctggaggactaccttatacataaaaggtacttatatgaaaga
attgatgggcgagtgagaggaaacctgaggcaagctgctattgatcgatttagcaaaaga
gactctgatcggtttgtgtttcttctgtgtaccagagctggtggattggggattaatttg
actgcagctgatacatgtataatttttgattctgattggaatcctcagaatgatctccag
gcgcaagcccgttgtcacagaattggtcagaacaaagcagttaaggtctacagactgata
acccgaaactcttatgagagagagatgtttgacagagcaagtctgaaattgggtctggat
aaagctgttttacagagcatgagtggaagagaaaatagtgttggtggtatccaacagctt
tccaaaaaagaaatagaagatctgcttcgtagaggtgcctatggtgctattatggatgaa
gaggatgagggctctaaattctgtgaggaagacatagaccaaatcttgcagcgccgtaca
aaaactatcacaattgaatcagaaggaagaggttcaacatttgccaaggctagttttgtt
gcatccggaaataggactgatatttcgttagacgatcctaacttttggcaaaaatgggca
aaaaaggcagaaatagatatagatgcgatcagtgggagaaacagcctcgttattgatact
ccaagaattaggaagcaaacaagacccttcagtgccacaaaagatgagctggctgagtta
tcggaagcagagagtgaaggagatgataaaccaaaactccggaggccttgtgatcgctcc
agtggatatggaagaacagagtgctttcgggtggagaaaaacttattggtttatgggtgg
ggtcgatggagagagattttgtcacacggtcggttcaagaggcaactaaatgagcaggac
gtggagataatttgccgagcacttctagcatattgccttgttcactacagaggagatgaa
aagattaaaagttttatatgggatctcatcactccaacagaggatggccagacacgagaa
ctccagaatcacctgggtttgtcagcccctgtgcccagaggtagaaaaggaaagaaagta
aagactcaggctagcacttttgatatacataaagcagaatggcttcgaaaatataatcca
gaacatctattgcaagatgaaggatataaaaaacacataaagcatcactgcaataaggtc
ttacttcgagtaagaatgctgtattacttaaaacaagaggtcattggtaatgaatgccag
aaagtgtttgatggagttgattccagtgaagttgatgtttgggtccctgagccagagcat
tctgaggttcctgcagaatggtgggatgcagatgcagataaatccctcctaattggagtt
tttaaacatggctatgaaaagtacaacactattagagcagatcctgcactctgtttcttg
gaaagggtgggcaagccagatgagaaagcagttgctgctgaacagagagcaaatgattac
attgatggggatgtagaagatccagaatataaaccagccccagcaatgtttaaagatgat
atagaggatgatgcgtcatcaccaggggatctagtaatagctgatggagatggtcagatg
atggaaggagacaaaatttattggcctactcagtctgctttaacaacacgtctgcgtcgc
ttaataacagcttaccagcgtactagtaagaacaggcaggcccagcaaatccaaccagtg
tttccagttcaggccactgtgatgcaacctccatatgaagaagctgctctaaatccaaaa
atggctgctaagattgaaaggcaacaaagatggacaagaagagaagaagctgatttttac
agggtggtatcaacatttggagtggtgtttgatccagaaaggggccgatttgactggaca
aaatttagagccatggctaggctacataagaaaactgatgatagtttggagaagtatttg
tatgcatttatgtctatgtgcaggagagtctgtcgccttccttcaaaagaagaacttgta
gacccaaccatttgtatccaaccaattacagaggagcgtgcttctcggacattgtatcgc
attgaactcctgaggaaggtacgagaacaggccctccgacattcacaactgtttgaacgc
ttgaaactttgtcagccaaatccagacttgccagtctggtgggagtgtggggcacatgac
agggacttacttattggagctgctaaacatggggttagcagaacagactaccacattctt
cgtgatcctgaactgtcatttatgtctgcccagcggaactacagtcagaataaagtggcg
ctatcaaggacttccactccacttctacatcagtatcagatggcattgtctgcttctcct
cttacccctcagtcaagattgccagatactaaagggaatactcttgaggatacaaaagtt
aaaaatgaaaaccttaaagaggactctcagtcatctgaagaggaatttatgtctactgag
gaaacacagacagtgatgaaatctgaacctttgagcccaaagaatggcatgccatcacag
actgtagaccacaaacctggtgtgaagaccgaaactgacaggcgtatggttgcagcaaga
acagagccccttactccaaatcctgcttccaaaaaacagagagtcagcaaaagagggtca
gactctagctctgattctgactcggattcagacagatcatcctgttcttccaggtcatct
tcctcatcctcttcctcatcttcttcttgttcacactcacggtcaggatctagctcttct
tcctcttcctcttgttcttcagcatcttcttcctcttcgtcgtcatcatcttcgtcatcg
tcatcatcttcgtcgtcgtcatctgaagagagtgacagtgatgaagaagcacaaaagcga
gcagaaggaaactctcacatcaaagcatatgatgaagagagcgtagcctctctgagcacc
acgctagatgagacccaagattgtttccagttgaacaatggaacaccaaattccagctat
cttctgcaaggtggatacatgttggctgcatcctattggccaaaggatcgagttatgatt
aaccgactagacagtatttgtcaaacagtgttgaaaggtaaatggccttctgcaagaaga
aattatgacagcagtacagtagcatctttctatacaaccaaacttctggacagcccaggt
gcagctgcggacaacagtgagcctagtgcaccgacacccccaactgtaggtgtaaaggaa
gaatatgatcagtcaccacagatgccaaaggtgaagaagcatgtgcgagaaaaggagttt
acagtgaaaatcaatgacgaaggtggtttgaaattgacttttcagaagcaggggttttct
cagaaaaggctatttgaaagtgaagaaggcatgttaggacagcaacagtacctggctcgg
ctacatgaactccagaatgcttcagagactagccttgtcaattttccaaaatccttacca
gaatcagatgcttccagtcagttaacagctagtgctaatggaatgatagtcgacagccag
cctgtagtcaaaaagaggagaggaaggagaaagaatttaggagttgacattctgtttatg
aatagagataaaccacctaaccacgttaatccgagcatgaacacctcacaagttgctcca
ataataaaccaaacattcacttattctcagtcgcaaggtctacttgatactgaaagccct
gttcctgtcattaacttgaaagatggaacaagacttgcaggtgacgatgcaccaaaaaga
aaagatttagaaaaatggcttaaggaacatcctggttatgttgaagatttaggagctttt
attcctagaatgcagcttcatgatgggaggccaaaacaaaaaaggcatcgttgtcgaaat
cctaataaattggatattaatagtcttactggtgaagaacgtgttcagctgattaataga
agaaacgctagaaaggtgggaggtgcttttgctccaccactgaaggacttgtgcagattc
ttgaaagaaaatcctgagtatggtgtagctcctgaatggggggatgttgtgaaacagtct
ggatttcttcctgaaggtatgtttgaccgtattcttaccgggcctgttgtacgagaagaa
gtaagcagaagagggaggcgtcctaaaagtgagattgccaaagcaacagctgcagcagct
gctgcaacagcagcaaatgtttctgtcaaccctttgctagccaatggattacttccagga
atggatctctctactcttcaggccttacaacaaaacttgcaatcgctgcaagtaacagca
gggttaatgggaatgcctgctggactaactactggaggagaagctaagaatatggccacc
atgttccccatgctgctgtcaggaatgactggattaccaaacttgctgggtatgggagga
ctcctaacacagtctacagaatctgtttcagaggataaaaggggaaacgactcaaaagag
cctgatgtaaagaaagaaaggaccgaaaaacaacatgcagataatggtggtgaagactct
gtgtcaagttctccctctacatcctctgctgctgccaaccccttagctcttaacccatta
cttttgtccaatatactttatccagggatgcttctcactccaggccttaatcttcatatc
tcagctttgtcccaatccaatatttttgatgtacagaaaacagaaaacaatgacacaggc
tcaaccaagcctacagagaaaaaggaggaaaattctagggttagagatcaggaagacaaa
gggggaacagcgccaaattctcataatgagaacagcacagatgagggttcagagaaagca
gatgcttcatctggatctgacagtacatcatcttcatctgaggattcagattctagtgat
gaagactga
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integrated database retrieval system
