Carettochelys insculpta (pitted-shelled turtle): 142020560
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Entry
142020560 CDS
T11194
Symbol
EXOSC6
Name
(RefSeq) exosome complex component MTR3
KO
K12587
exosome complex component MTR3
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Pathway
ciz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
142020560 (EXOSC6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ciz03019
]
142020560 (EXOSC6)
Messenger RNA biogenesis [BR:
ciz03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
142020560 (EXOSC6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
Motif
Other DBs
NCBI-GeneID:
142020560
NCBI-ProteinID:
XP_074864628
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All DBs
Position
14:2852190..2855289
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AA seq
296 aa
AA seq
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MPLDPRRVPGPEESQAPLLYARPGPAEEEEEQEQEQEQAEAEAAGAGAGAGALRPLVARA
GVLSQAEGSAYVELGGGTKVLCAVRGPREAAEGRGRGRLLCDFRRAPFCARGARPRPGPA
ARERERELGLWLQEALAPAVRLARYPRARLELTALLLQDGGSGLAAALCAAALALADAGV
EMFDLAVGCGLCRAAGPGAAWRLQPGAAEERAAAARLTVALLPGLNQVAGLLGSGAGGPP
ESWARAVRLGVEGCQRLYPLLRRSLLRAAQRRARPRGPLGQPPDRPALGGPPGVRP
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgccgctggacccgcggcgcgtgccgggcccggaggagtcgcaggcgccgctgctgtac
gcgaggccgggcccggcggaggaggaggaggagcaggagcaggagcaggagcaggcggag
gcggaggcggccggggccggggccggggccggggcgctgcggccgctggtggcgcgcgcc
ggggtgctgagccaggccgagggctcggcctacgtggagctgggcggcggcaccaaggtg
ctgtgcgccgtgcgcgggccgcgcgaggcggccgagggccgcggccggggccggctgctc
tgcgacttccgccgcgcgcccttctgcgcccgcggcgcgcgcccgcggcccggcccggcc
gcccgcgagcgcgagcgcgagctgggcctgtggctgcaggaggcgctggccccggccgtg
cgcctggcgcgctacccgcgcgcgcgcctggagctgacggcgctgctgctgcaggacggc
ggctcgggcctggccgccgcgctctgcgccgccgccctggcgctggccgacgcgggcgtg
gagatgttcgacctggcggtgggctgcggcctgtgccgcgcggccgggcccggcgccgcc
tggcgcctgcagcccggcgcggccgaggagcgcgcggccgccgcccgcctcaccgtggcg
ctgctgccgggcctcaaccaggtggccgggctgctgggcagcggcgcgggcggcccgccg
gagagctgggcgcgggccgtgcgcctgggcgtggagggctgccagcgcctctacccgctg
ctgcgccgcagcctgctgcgcgccgcccagcgccgggcgcggccccggggtcccctcggg
cagcccccggaccgacctgccctagggggtccccctggggtccgcccctga
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