Carettochelys insculpta (pitted-shelled turtle): 142020889
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Entry
142020889 CDS
T11194
Name
(RefSeq) uncharacterized protein LOC142020889
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Pathway
ciz03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
142020889
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ciz03021
]
142020889
03036 Chromosome and associated proteins [BR:
ciz03036
]
142020889
Transcription machinery [BR:
ciz03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
142020889
Coactivators
SAGA/TFTC/STAGA complex
142020889
Chromosome and associated proteins [BR:
ciz03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
142020889
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH3_20
ADPRTs_Tse2
Motif
Other DBs
NCBI-GeneID:
142020889
NCBI-ProteinID:
XP_074865233
LinkDB
All DBs
Position
14:complement(25772690..25802977)
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AA seq
612 aa
AA seq
DB search
MAAGASDPLEEMLFSEEVDEKAVSDLVGSLESQLAGGRIPAEETTPNSSLSSDQQQEHPG
RLVGGGSPVQQPQRGHPAPALLPEAGGAAWCPNSLGSPLSAQGVSPALSPPAAAAGRGAS
VNSSSMQQSHGAAPRISSPPSAPAIPVPLQAAAPPPPAGAPAQPASNHVDAHAAAPAAGS
GAREVESPSPGFSPPAAAGVVNDVLLLKDSEAATAGGGVIPATAASQVAKAVVLGSSAAA
TSPSLLQGPALHTIPPAAHSGNGTSSSAPVVVTQSPKAGCAPAAITQVVNHQDPSASHSK
PDSSTHSSAVNTLNKSVTSDPSVNVVTHPAQSSVANCAPLVSSTVTVNAIANPIVNIIGP
PGSAVGVPKQATAVPVVSAVPQSLSPRSAVGTAAQRIVAPQLIVRPPQQTTTIQLPPGFT
IPPGMVLVRTEAGQFVMVPQQALAQAQVQTQGQGPTSISPRLSAPTNGPVFRLTTTQQPT
SIGTSAVHLGLPVQAKVVQSTATPVSATSTVSLPGGSALSYTTVSVAATSAQSLTTVATG
TLGTPQPVVTSGGQTQTAAQPQGQPQLSLPPHRTAQIPAQLQVIPSSPVPGTTVVSQFYS
MPRRAFTPAQYP
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggcgcgtcggatcctctggaagagatgctcttctccgaagaggtggacgag
aaggcggtcagcgacctggtgggctccctggaatcgcagctggccggcgggcggatcccc
gccgaggagaccacccctaacagcagcctctcctccgaccagcagcaggagcacccgggg
cgcttggtggggggcggcagcccagtacagcaaccgcagcgagggcatcctgcccctgcc
cttctccccgaggcagggggggcagcctggtgcccaaattccttgggcagcccgctctca
gcccagggggtatccccggccctgtccccgccagcggcggctgccgggaggggagcgagt
gtaaacagtagtagcatgcagcaatcacatggagcggcgcctcgcatcagcagccccccg
agtgcacctgctatccctgtccccctgcaagccgctgcaccacctccgcctgctggcgcc
ccagcccagcctgccagcaaccatgtggatgcccatgccgctgctcctgctgctggcagc
ggtgcccgggaagtggagagtcccagcccggggtttagtcctccagcagcggccggtgtg
gtgaatgatgtgttgctacttaaagactcggaggccgccactgctgggggtggtgtcatt
ccagcaaccgcagcaagtcaagttgcaaaggcggtagtgctgggtagttcagctgctgct
acttctccctctcttctccagggacctgcattgcatactattcctcccgcggcacacagt
gggaatggcacttcctccagcgctcctgtggttgtcactcagagtccaaaggctggttgc
gctccagcagcaataacacaggttgtcaatcatcaggatccgtctgccagccacagcaaa
ccagactcttccacacacagttctgcagtaaatacactcaataagtctgtcacttctgat
ccttcagtgaatgttgtcacccatccagcccaaagttcagtagccaactgtgccccttta
gtatccagcacagtcactgtcaatgctatagctaaccccatagtaaatattatagggcca
ccagggtctgctgttggggtacccaaacaagctacagccgttcctgtcgtctctgcagtc
ccccaatcattgtcacccaggtctgcagtgggcactgctgctcagagaatagttgcacca
caattgattgttagaccacctcagcagactacaacaatccagttgcctccaggttttact
ataccacctggtatggtcttggtgcgcaccgaagccggacagtttgtaatggtacctcag
caggctttagcccaggctcaagtacaaacacagggccaaggtcctaccagcatctcgcct
cggctttcagcacccacaaatggtccagtttttcgtttaacaacaacccagcaaccaact
tctataggcacatcagctgtccacttgggacttccggtacaagccaaagttgtacagtcg
actgctacaccagttagtgctacatcaactgtgagcttaccagggggttctgctctgtca
tacactacagtatcagtggctgccacaagtgctcagagcttaacaacagtagcaacagga
accttaggaactccacagcctgtggtaacgtctggaggacagactcaaactgcagcacaa
cctcaaggtcagcctcagctgtcacttccacctcataggacagcacaaataccagcacaa
ctgcaggtcatacctagctctcctgtaccagggactacagttgtatcacagttttactca
atgccaagaagagctttcacgccagcccaatacccataa
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