Carettochelys insculpta (pitted-shelled turtle): 142021015
Help
Entry
142021015 CDS
T11194
Symbol
DDX46
Name
(RefSeq) putative ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Pathway
ciz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
142021015 (DDX46)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ciz03041
]
142021015 (DDX46)
Enzymes [BR:
ciz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
142021015 (DDX46)
Spliceosome [BR:
ciz03041
]
Complex A
U2 snRNP components
U2 related factors
142021015 (DDX46)
Complex B
142021015 (DDX46)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
KH-I_KHDC4-BBP
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
142021015
NCBI-ProteinID:
XP_074865477
LinkDB
All DBs
Position
15:26234698..26268610
Genome browser
AA seq
1036 aa
AA seq
DB search
MGRESRHYRKRSTSRGRSGSRSRSRSPTDKRAKRGEDRRSRSRDRERRRERSRSRDKRRS
RSRDRKRLRRSRSRERERSRERRRSRSRERRRSRSRSRRSRSSSPGKSKKTENRSRSKEK
TESVEVSKEKKKEKEDKEEEKDKEVNNFDQNKLEEEMRKRKERVEKWREEQRKKAMENIG
ELKKEIEEMKQGKKWSLEDDDDDEEETAEGEKEEEEIEDEELDPLDAYMEEVKEEVKKFN
MRSVKGGGGNEKKSGPTVTKVVTVVTTKKAVVESEKKKGELMENDQDAMEYSSEEEEVDL
QTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMTLEEVNVYRLEMEGIIVK
GKGCPKPIKTWVQCGISMKILSCLKKHGYEKPTPIQAQAIPAIMCGRDLIGIAKTGSGKT
IAFLLPMFRHIMDQRSLEEGEGPTAVIMTPTRELALQITKECKKFSKTLGFRVVCVYGGT
GISEQIAELKRGAEIIVCTPGRMIDMLAANNGRVTNLRRVTYVVLDEADRMFDMGFEPQV
MRIVDNIRPDRQTVMFSATFPRAMEALARRILNKPIEVQVGGRSVVCSDVEQQVIVIEEE
NKFLKLLELLGHYQEKGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIIN
DFKNGACKLLVATSVAARGLDVKQLMLVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFI
TEDQARYAGDIIKALELSGKPIPAELEKLWSDFKDQQKAEGKIIKKSSGFSGKGFKFDET
EQALANERKKLQKAALGLQDSDDEDTALDIDEQIESMFNSKKRVKDMAAPGTSNVPAPTA
GNAEKLEIAKRLALRINAQKNLGAEAQVFVPFHFKDVMQQATNAILRGGTIQAPTVSAKT
IAEQLAEKINAKLNYVPIEKQEEEKQEGGQNESFKRYEEELEINDFPQTARWKVTSKEAL
QRISEYSEAAITIRGTYFPPGKEPKEGERKIYLAIESANELAVQKAKAEITRLIKEELIR
LQNSYQPTNKGRYKVL
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atgggccgggagtccaggcattatcggaagcgttccacatcacgtggacgctctggtagc
cgctctagaagtcgatctccaactgacaaaagagcaaaacgtggagaagacaggcgttct
agaagtagagatagagaacgcaggcgtgagaggtcacgcagcagggacaagagaagatct
cggtcacgggacagaaagcgcctgagacgttcaagaagcagagagagggaaaggagcaga
gagagaagacgatcacgcagtcgagagagaagaaggtccagaagcagaagtagacggtcc
cggtcctctagtcctgggaagagtaagaaaacagaaaacagatcaagatctaaagaaaag
acagaaagtgtggaagtttccaaagaaaagaaaaaagagaaagaagacaaagaagaagaa
aaggataaagaagttaacaactttgatcaaaacaaactagaggaggaaatgagaaaacga
aaagagagagtggagaaatggagggaagaacagcgcaagaaggctatggaaaatatagga
gaactgaaaaaagaaattgaagagatgaaacaagggaaaaaatggagcttggaagatgat
gatgatgatgaagaggagactgcagaaggggaaaaagaagaagaggaaattgaagatgaa
gaattagatccactggatgcttatatggaagaagttaaagaggaggtcaagaagtttaat
atgagaagtgtgaaaggtggaggtgggaatgaaaagaaatctggaccaactgttaccaaa
gtagtaactgtggtgacaaccaaaaaggcagttgtggaatcagaaaagaagaaaggggaa
cttatggagaatgaccaagatgcaatggagtattcgtcagaagaggaggaagttgatctt
caaactgccctgacaggttatcagaccaaacagaggaagctgttggaaccagtggatcat
ggaaagatagaatacgaacccttcaggaaaaacttctatgttgaagttccagagctggct
aaaatgactctagaggaggtgaatgtatacaggctggaaatggagggaattatagtcaag
ggaaaaggctgccccaaaccaatcaaaacctgggtacaatgtggtatatccatgaaaatt
ctcagttgccttaagaaacatggctatgaaaagcccacacccatccaagctcaggctata
ccggcaattatgtgtggacgtgacttgattggcattgctaaaacaggaagtggaaagacc
attgcatttctgttgcctatgttcagacacataatggatcagagatcgttagaagaagga
gaaggtccaactgctgtcatcatgactccaacccgagagttggctttacaaattaccaag
gaatgtaagaagttctcaaagacacttggatttagagttgtctgtgtgtatggaggaaca
ggaataagtgaacagattgctgaactaaaaagaggtgctgaaattattgtttgcacacct
ggacgaatgattgacatgttagcagctaataatggtcgggtgacaaatcttcgcagagtt
acatatgttgtactggatgaagcagacagaatgtttgacatgggttttgaacctcaggtc
atgcgtattgtagacaacatcagacctgatcgtcagacagtcatgttctctgccaccttc
cccagagctatggaggcattagctcgtcgaattctgaataagccaattgaggtacaagtt
gggggcaggagtgttgtgtgttctgatgtggaacagcaagtgattgtgatagaagaagag
aataagttcctgaagttacttgagctgcttgggcattatcaggagaaaggatcagtcatc
atatttgtcgataaacaggaacatgctgatgggttgttgaaagatttaatgagagcctct
tatccctgcatgtcacttcatggaggtattgatcaatatgatagagacagcatcattaat
gattttaagaacggagcatgcaaacttcttgtggccacatctgtagcagcacggggcctg
gatgtaaagcaactaatgctggtagtcaattacagctgtcccaaccattatgaagattat
gtgcacagagcaggccgaactggacgagctggcaacaaagggtatgcgtacactttcatt
actgaagatcaagcacggtatgctggtgatataattaaggcgttggaattgtcagggaaa
ccgattcctgctgagctggaaaaactctggagtgacttcaaagatcaacagaaggctgag
gggaagattattaaaaagagcagtggcttctctggcaaaggattcaagtttgatgaaaca
gaacaggctttggctaacgagcgaaagaaactacaaaaagctgctcttggccttcaggat
tcagatgatgaagatacagctcttgatattgatgaacaaattgagagcatgttcaattcg
aaaaagagagtaaaagacatggcagcaccgggaacatctaatgttcctgcaccaacagcc
ggtaatgcagaaaaactggaaattgcgaaaagattagctttaagaattaatgctcagaag
aatcttggcgcagaagcacaagtatttgtcccgtttcactttaaggatgtgatgcagcag
gctacaaatgctatcttgagaggaggcacaattcaagctcctactgtatctgccaaaact
attgcagagcaactggctgaaaagataaatgccaagctcaattatgtgcccatagaaaaa
caagaggaagaaaaacaggagggaggacagaatgagtcatttaagagatatgaggaggaa
ttggagatcaatgatttcccacagactgctagatggaaggttacctctaaggaagctctg
cagagaatcagtgaatattctgaagctgccattacaatcagaggaacatactttcctcca
ggcaaagagcccaaagaaggagaacgaaaaatttacttggctatagagagtgccaatgaa
ctggctgtgcagaaagcaaaggcagaaatcactaggcttataaaagaagaacttatcaga
ctgcaaaattcataccagccaaccaacaaaggaagatacaaagttctgtaa
DBGET
integrated database retrieval system
