Carettochelys insculpta (pitted-shelled turtle): 142021234
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Entry
142021234 CDS
T11194
Symbol
UIMC1
Name
(RefSeq) BRCA1-A complex subunit RAP80 isoform X1
KO
K20775
BRCA1-A complex subunit RAP80
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Pathway
ciz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
142021234 (UIMC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ciz03400
]
142021234 (UIMC1)
DNA repair and recombination proteins [BR:
ciz03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
142021234 (UIMC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAP80_UIM
UIM
Motif
Other DBs
NCBI-GeneID:
142021234
NCBI-ProteinID:
XP_074865902
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All DBs
Position
15:complement(39160740..39247791)
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AA seq
783 aa
AA seq
DB search
MPRKKPQTDSPAVKGPDKEQEEQRGLANARKKRSFVDAFIVISDSDGEQEAHEENGAQKK
RTKQQLDRVKFAAKRRIAQMTEEEQFALALKMSEQEARQVNCREEEEEELVRKAIAESLS
SYQPSECPAPTEPPPMEAAGVPGQSHPAEPGPRELHGAVPACPDSPPSACRSHARSTQAL
GNGQPDGARSPLVVLTRLSQDIVESSLLSSITVSPGKSKETSPSPAGSSSRDALPSPPRG
SLISLSPTFAPLAPSDWQLTPRRLFAGAGDTAAAAGGEGHKRLLAGPSEPPACSSAVLLK
GRTSEPAGLPEQSGAAGGPQCAPGHGQGQGQGQGRGSGSLCTEHVERSEGPENAPRTAEE
PCEQENGRDSVHYYWGVPFCPKGVDPNQYTQVILCQLEVYQKSLKQAQRQLLQKKGFGDP
VVPCSSPREHGRAEHTSRGNGVPSEPEAGDSDSSKELESAAWLLSTQPTEPQQVPGPDAD
EEKNPTSEEEPTTSYCQASQGLFAEDTPEDGEPMQITRSISALTPLDSKRSPDMARQSSA
EEEITVCPETQPSPSVAIEPQRAELCSASEDAPVQEAGTAEAGNARPKGGVLCPLCERGY
PAAEIELHAMYCNGSVGEGAHEDMPALAHGPRETRSRAGRGGDGPAPGDADKGEKCYLCK
ALVPLAQYQRHVDGCLQAARGVQGHRRLRSAKGLGRGEGRLLSMLEMSECKAAGAEATGV
LAAAGEPSRPTPAGADEEVGSSLALERALPQAAFSNGPGPRAVGGRGGFQQQSAGSRRRR
RKC
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgcccaggaagaagccgcagacggacagccctgctgttaagggcccggacaaggagcag
gaagagcagaggggtctggccaatgccagaaagaagcggagttttgtggatgcttttatc
gttatatctgacagcgatggagagcaggaggcacacgaggagaatggagcccagaagaag
agaaccaagcagcagctggacagagtgaagtttgctgctaaaagaagaattgcacagatg
actgaagaggagcagtttgcgctggctctgaaaatgagtgagcaggaagccaggcaagtg
aactgccgggaggaggaggaggaggagctggtgaggaaggccatcgccgagagcctcagc
agctaccagccgtcagagtgccctgctcccactgagccacctcccatggaggcagccggc
gtgccagggcagagccacccggctgagccagggccacgtgagctgcacggagctgtgcca
gcctgccccgattccccaccatcagcgtgccgctcccacgcccgcagcacccaagctctc
gggaatggacagccggatggtgccaggagtccccttgtcgtgctgacgaggttaagccag
gacatagtggaaagctccctgctatccagcataacggtgtcaccagggaagtcgaaggaa
acgtctccctccccagcagggagcagttccagggatgcgttacccagccccccgcggggg
agcttaatctccctgagccccacctttgccccgctcgcacccagcgactggcagttgacc
cctcggaggctctttgcaggtgcaggtgacactgctgcagcagcgggtggggaaggacac
aagaggcttctggctgggccctcagagcctcctgcttgcagctcagccgtgctcctgaag
ggccggacctcagagccggctggccttccagagcagagtggggcagcaggaggcccccag
tgcgcaccggggcatgggcaagggcaagggcaagggcaagggcgaggctcaggctctctt
tgcacggagcacgtggagcgcagcgaggggcctgagaacgcaccgcgcacagctgaggaa
ccgtgcgagcaggagaatgggcgagacagcgtgcactattattggggtgttcccttctgc
cccaagggggtggacccaaaccagtacactcaggtcatcctgtgccagctggaggtgtac
cagaagagcctaaagcaggctcagaggcagctcttgcagaagaaggggtttggtgatccg
gtggtgccctgctcttctccccgggagcacgggagagcggagcacacgagccggggaaac
ggtgttcccagcgagccggaagctggagattccgacagcagcaaggagctggagagtgca
gcctggcttctctccacccagcccacagagcctcagcaggtgccagggccggacgcggat
gaggagaagaaccccacgtccgaggaggagcccaccaccagctactgccaggcctcccag
gggctgtttgcagaggacacgcccgaagacggggaaccgatgcagatcacacggagcatt
tctgccttgaccccacttgacagtaagaggagcccagacatggccaggcagagctctgct
gaagaggagatcaccgtttgtcccgagacccagccaagcccatcggtggcgattgagccc
cagcgagcagagctctgttcggccagcgaagatgcacccgtgcaggaggctggcactgca
gaagctgggaatgccaggcccaagggcggcgtgttgtgcccgctctgtgagcgagggtat
ccagctgccgagattgagcttcacgccatgtactgcaacggcagcgtgggagagggcgca
cacgaggacatgccagcgctcgctcacggaccaagagaaacccggagcagggctggcaga
ggcggggacggcccggcgcccggagacgctgacaagggtgagaagtgctacctgtgcaag
gccctggtgccactggcgcagtaccagaggcacgtggacggctgcctgcaggctgcgagg
ggtgttcaggggcaccggaggctgcgcagtgccaagggccttgggcggggcgaaggccgg
ctgctcagcatgctcgagatgtcggagtgcaaggcggcaggtgctgaggcaacgggcgtg
ctggcagcagcaggagagcccagcaggcccaccccggcgggggctgacgaggaagtaggc
agcagcctggccctggagagggcccttccacaggcggcgttcagcaacgggcccggcccc
agagctgtgggcggccgaggaggcttccagcagcagagcgcaggcagccggcggcggcgg
aggaaatgctga
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