Carettochelys insculpta (pitted-shelled turtle): 142021262
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Entry
142021262 CDS
T11194
Symbol
SOX30
Name
(RefSeq) transcription factor SOX-30
KO
K09271
transcription factor SOX15/30
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ciz03000
]
142021262 (SOX30)
Transcription factors [BR:
ciz03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
142021262 (SOX30)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
142021262
NCBI-ProteinID:
XP_074865970
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All DBs
Position
15:complement(37020123..37031303)
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AA seq
729 aa
AA seq
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MEGGPQEEPPCQPPPKARQEASRLEQLLLHPLSRQGGRETHLLYLPSRSGPPHQLLSPLP
AQGNPCKELHPLDGQSAPSKLLPPPSAVLASGEPEGERGPRRVLQAKSEEQEHGGQLGCS
SCSKKKRGDLKAAVARRAGKEGAQLMASGTLKGGGDKERGNIEETQKEVIVKETGGDNMA
LDTGKDIKTEQVEAAGEDCKEGEEAGSVSGLVYASSDVPVAQLPGGFGAQQPQDLKIPLT
LHPVPSGARIQFQGPSPSELIRVTKVPLAQVPLKMQSLLEPSVKIETKDVPLTVLPSDAG
IPDTPFSKDRNGHVKRPMNAFMVWARIHRPALAKANPAANNAEISVQLGLEWNKLTEEQK
KPYYDEAQKIKEKHREEFPGWVYQPRPGKRKRFPLTVSTVFSGTSQNIITTNPTTIYPFR
SPTYSVVIPSVQNNIGHPVCEAPSAIQLPAPSIQHPGPIAIFQPSVGSTTPVAVPAPTLP
LHPVVPPQHFAGPPQTEAHHVSSGSSCSIKRPTPICIESSSRTPSNASTAHSRFPPSNNQ
PTKEYSGVPACSRSAPIPQASPMPHSHLYQPPPIGHPATLFGAPPRFSFHHPYFLPGPHY
FPSSTCPYSRPPFGYGNFPSSVPECLGFYEDQYQKHEAMFSALNRDYPFREYPDERTHSE
GSRSCESLEGASYYSHSHSEEEYLTPMPQLDIGALENVFTATPSTPSSIQQVNVTDSEEE
EEGKVLRDL
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atggagggggggccgcaggaggagcccccctgccagcccccccccaaggccagacaggag
gcatcccgcttggagcaacttctcctgcaccccctgtcgaggcaggggggcagggagacg
cacctcctgtacctcccctccaggtcagggcctccccatcagctgctgtcccctctccct
gcacagggcaacccctgcaaggagctgcaccccctggatgggcaaagtgcccccagcaag
ctgctgccacccccctcagctgtgttggcatctggggagccagagggggagagagggccc
cgtcgggtgctgcaggcaaaatcagaggagcaggagcacgggggccagctggggtgcagc
agctgcagcaagaaaaagaggggtgacctcaaggccgctgtggcccgacgagcagggaag
gagggggcccagctgatggctagtggcaccctcaagggaggaggggataaggaaagaggg
aacatagaggagacacagaaagaggtaatagtgaaagagactgggggggacaacatggct
ttggacactggaaaagacatcaagacagagcaggtcgaggcagctggtgaggactgcaag
gagggggaagaggctggatctgtcagtggcctggtttatgccagcagtgatgtccctgtg
gctcagctacctggtgggtttggagcacagcagccacaagacctgaagatcccattgacg
ctccatccagtaccctcaggggccaggatccagtttcagggaccatcgccgtctgagctg
atccgagtgactaaagtgcccctggcccaagtgcctcttaaaatgcaatccttactggaa
ccttcagtcaaaatagaaactaaggatgtgcccctcacagtgctgccctctgatgcaggg
ataccagatacaccatttagcaaagacagaaatggccatgtaaaacgtccaatgaatgca
tttatggtatgggcaagaattcaccggccagcactagccaaagctaacccagctgccaat
aacgcagaaatcagtgtccagcttggattagagtggaacaaactcactgaagagcaaaag
aagccctattatgatgaagctcaaaagattaaagaaaagcacagagaagaatttcctggt
tgggtgtaccaaccacgacctggcaaaagaaagcggttcccactgacggtctctactgta
ttttctggcacctctcagaacattatcactacaaacccaaccacaatttatcctttccga
tcacccacttattctgtggtcattcccagtgtacagaacaatattggacatcctgtctgt
gaagccccttctgcgatccagttgccagctccttccattcaacatccaggtccaattgca
attttccagccgagtgttggaagcaccacaccagtcgctgtcccagctccaactctgcct
cttcaccctgtagtcccaccacagcactttgctggacctccccagacagaagctcatcat
gtatcttctggatcaagttgttccataaagagacctaccccaatatgcattgagagctcc
agcaggaccccaagtaatgccagtactgctcactccagatttcctccctctaataatcaa
cccactaaggagtactcaggtgttcctgcttgttctagaagtgcaccaattccccaggct
tctcccatgcctcactcacatctttatcaacctccacccattggtcatccagccactctc
tttggagcgcctcctcgattttcgtttcatcacccgtatttcttacctggaccccactac
ttcccatcaagcacgtgcccatacagccggcctccgtttggctatgggaatttccctagc
tccgtgcccgaatgccttggcttttatgaagaccagtaccaaaagcacgaggctatgttt
tctgccctgaatagagactaccctttcagggagtacccagacgaacgcacacacagtgaa
ggctcccgcagctgtgagagcctagagggggcttcttactacagccacagccatagcgag
gaagaatatttaacccccatgccgcagctggatatcggagctttggagaacgttttcaca
gcaaccccttccacgccctccagcatccaacaagtcaatgtgactgatagcgaggaggag
gaggaggggaaagtgctaagagatttgtaa
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