Carettochelys insculpta (pitted-shelled turtle): 142021277
Help
Entry
142021277 CDS
T11194
Symbol
TCOF1
Name
(RefSeq) treacle protein isoform X1
KO
K14562
Treacher Collins syndrome protein
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Pathway
ciz03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
142021277 (TCOF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ciz03009
]
142021277 (TCOF1)
Ribosome biogenesis [BR:
ciz03009
]
Eukaryotic type
90S particles
Other 90S particles
142021277 (TCOF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Treacle
Motif
Other DBs
NCBI-GeneID:
142021277
NCBI-ProteinID:
XP_074865991
LinkDB
All DBs
Position
15:32289602..32327658
Genome browser
AA seq
1042 aa
AA seq
DB search
MAAAGRGQRQLLVLIHQHLLRAGYVKAARELQLQLGQKEFPAQLTSLEDIFTHWQQTPPN
AKKRKASDLERGVPTKKIRVPDPKSSSESSEEETKAVTAGAPVVSNSTVQAESSEDEDSS
SEEEAVAGKETKEVRPAAASSKAANSLPHVAHNKANATSGKLAAAAGAGKSKAASNKLMP
AVPAASSTLVKAGQKKAPAGRPGTAAATRAKVGQSKAVGAVTAKAAESSESSNSSENEEG
EKRPAGKLPGPKSALKPPAGKAEQSSEGSSGDTSSEEELETPVLQTKPAGRAVPINATPV
KSAPATPVLTKRSPGKVGTPAPWKRTTETPTQGKSGVAKVTAPAKAAGSAKAQDTSESSS
DSDSEDEEARSAAQTDPSAKAPQATATLLKSAPATPLAARAAPAKASIPAPRKQLSKLAV
PSQASMGPGTPRTTAKAEESSESSDSSGSEDEAPPVPISQKRLPQSQAPSGAKPCPVGTA
VSPVKAAASALKGQDSESESSLSSDSEEEEAAQTQPPNAAVKTAAVAQLTSSKKAQALPA
SLPKVQAAAESSEESDSEEESIPPQQPTPAKLVLAPKPPDTTASAAKLTPPTGTGTHRVA
ISPGKAAAAAVSESSSSSSSESEDDELPAGQQGAASGKATTPAGKGVQASAPRLQSLSVK
GRGPIAGKAGLQAAGGSTQRPVLPVLPAKGPSPESSSSSDSEEEEEETVKQPLKPAGVPQ
KQGAAKEAESSSSESSEEDQQPSQSLLTGYQGLPKAPAGPQAQKPASLTIPKPGRRKAAA
TASALVKPRKAALPDVSASDSSDSDTDTEKSPANQKAGSKLPSPGAEVKVASGKGAMVGK
AGGKALLVKAGLPLAQNDASSKGAPGPLSAYTLLSIAPSAKESSASESEDETTTAAKALA
GPTPGEPEGGKKEKKTKKTTVASAKALKAVKTPKGGDKENKKQKSSLKRKLAAVGAAGVT
EPKLKKLKSSLEAPKKKKSKVGSSKEKKKKSGKKKKTLKDKKKKSKKAASGAEPSADGSA
PAHKKKKKKKKKKKEAELQGSL
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atggcagcggcgggccggggccagcggcagctgctggtcctcatccaccagcacctgctg
cgcgccggctacgtcaaggcggcgcgggagctgcagctgcagctgggccagaaagagttt
cctgcgcagttgacctctcttgaagacatctttacccactggcaacagactcccccaaat
gccaagaaacgaaaggcgagcgacttggagagaggcgttccaacaaaaaagatcagagtt
cctgatcccaagagcagctccgaaagctcagaagaggagacaaaagctgtgacagcaggt
gcccctgttgtgagtaactccacagtgcaggcagagagcagcgaggacgaagactcctct
tccgaagaggaggcggtggctggaaaggaaacaaaggaggtgagacccgctgctgccagt
agcaaagctgccaattctctgccacatgttgcccacaacaaagccaatgctacttcaggt
aagctggcagctgctgctggggcaggaaagagcaaagccgcctccaacaagctcatgcct
gctgttccagctgcctcttcaactctggtcaaagcagggcagaagaaagctcctgccggt
aggccaggaactgctgcagcaactcgggccaaagtcgggcaaagcaaagcagtaggagca
gtaaccgcaaaggcagcagagagctccgaaagcagcaattcgtcggagaatgaggaaggg
gagaagaggccagcaggcaagctcccaggtcccaaatcggcgctaaagccaccagctgga
aaggccgagcagagcagtgagggctcgagtggtgacacttcctctgaagaggaattagaa
accccagtgctccagacaaaaccagctgggagagcagtgccgatcaacgcaacaccagtg
aaaagtgctccagccactccagtgcttaccaagaggtccccagggaaagtgggcacccca
gctccatggaaacgaaccacagaaacaccaacccagggcaaatcaggcgttgcaaaggtg
actgctcctgcaaaggctgctgggagcgcaaaggcgcaggacacttctgagagcagcagc
gactcggacagcgaagatgaggaagccaggtcagctgcgcagacggacccatctgcaaaa
gctccccaggccacggcgacactgctgaaaagtgcaccagccactcctctggccgccagg
gcggctccagcgaaagcctcaataccagctccgcgaaagcagctctcaaaactagctgtg
cccagccaggctagcatggggcctggaacgcctagaaccactgcaaaggcagaagagagt
tcagagagcagcgactcgtcgggaagtgaggatgaggctcccccggtgccaataagccag
aagagattgccacagtctcaggctccttctggtgccaagccctgcccggttggtacagct
gtgagccctgtgaaagcagctgcaagtgccttgaagggccaggactcagagagtgagagc
agtttgtcttcggacagcgaggaggaagaggcagcacaaacacagcctcctaatgctgca
gtgaagaccgctgcggtggcacagctgacgagcagcaagaaggcccaggccctgccagca
tctcttccaaaagtgcaagcagcagcagagagcagtgaggagtctgactcggaggaggag
tcaatccctccacagcaaccaaccccagcaaaacttgtccttgccccgaaacctccggac
acaacagccagcgcagcaaagctcacgccgcccactgggacagggacacacagagtagcc
atcagccccgggaaggcagctgctgccgcagtgtctgagagctcaagttcgagttcctcc
gagagcgaggacgacgagctgcctgcaggacagcaaggggctgcctcaggtaaagccact
acccctgcagggaagggtgtgcaagccagtgctcccaggttgcagagcctttcggtcaag
ggcagaggtcccattgcaggaaaagcaggacttcaggctgcaggcgggagcacccagcgc
ccggttttgcccgtcctgcctgccaaagggccgagcccggaaagtagcagttcctcggac
agcgaggaggaagaggaggaaacggtcaagcagcccctaaagcctgcaggggtgccccag
aagcagggagcagcgaaggaggccgagagctcctcctcagagtccagtgaggaagaccag
cagccctcacagtcccttctcacaggttatcaaggtcttcctaaggccccagcagggccc
caagcccagaaacctgcttccttgaccatacccaaacccggccgtagaaaagcagcagcc
actgccagtgccctcgtgaaacctaggaaagcagcgctgccagacgtctcggcgagcgac
agcagtgactccgacacagacaccgagaagtcgccagccaaccagaaggcagggagcaag
ttgccctctcctggagcagaagtgaaagtggcctccggcaaaggcgctatggtggggaaa
gcgggaggcaaggccttgctagtaaaggcaggcctgcctctggctcagaatgacgccagt
tcaaagggcgctccggggccgctgtcagcctacaccctgctgtccatagcaccatcagcg
aaggagagctcggcgagtgagagtgaagacgagacgaccactgctgccaaggctctggcc
gggcccacaccaggagagccggagggaggcaagaaggagaaaaagacaaagaaaacgact
gtggcttcagccaaggctctgaaagcggtgaaaacacccaaggggggggacaaagagaac
aagaagcagaaatcctccctgaagaggaagctggcggcagtgggagctgcgggcgtgaca
gagcccaagctgaagaagctgaaaagcagcctcgaggcgcccaaaaagaaaaaaagcaaa
gtgggaagcagcaaggagaaaaagaagaaatctggtaaaaagaagaagacgctgaaagac
aagaagaagaagagcaagaaggctgcctccggagcggagccgagcgcagacgggtctgct
cctgcccacaaaaagaaaaagaaaaagaaaaagaagaagaaagaggctgagctccaggga
tccttgtga
DBGET
integrated database retrieval system
