Carettochelys insculpta (pitted-shelled turtle): 142021437
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Entry
142021437 CDS
T11194
Symbol
CPSF4
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4 isoform X1
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Pathway
ciz03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
142021437 (CPSF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ciz03021
]
142021437 (CPSF4)
03019 Messenger RNA biogenesis [BR:
ciz03019
]
142021437 (CPSF4)
Transcription machinery [BR:
ciz03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
142021437 (CPSF4)
Messenger RNA biogenesis [BR:
ciz03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
142021437 (CPSF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCCH_3
Torus
zf-CCCH_2
zf-CCHC
zf-CCCH_4
zf-CCHC_3
zf-C3H1
Nab2-like_zf-CCCH_
Motif
Other DBs
NCBI-GeneID:
142021437
NCBI-ProteinID:
XP_074866314
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All DBs
Position
16:31271186..31277618
Genome browser
AA seq
269 aa
AA seq
DB search
MQELIASVDHITFDLEVAVEQQLGAQPLPFPGMDKSGAAVCEFFLRAACGKGGMCPFRHI
SGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESK
IKDCPWYDRGFCKHGPLCRHRHTRRVICVNYLVGFCPEGPACKFMHPRFELPMGTTEQPP
LPQPTQPQQKQNNNPPLQRSSSLIQLTSQNSSPNQQRTPQVIGVMQSQSNNVGNRGPRPL
EQVTCYKCGEKGHYANRCTKGHLAFLSGQ
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgcaggagctcatcgccagcgtggatcacatcacgttcgacctggaggtcgcggtggag
cagcagctgggcgcgcagcccctgcccttccccggcatggacaaatcgggtgctgccgtc
tgtgaattttttttaagagctgcctgtggaaaaggaggcatgtgtccttttcgacacatc
agtggagaaaagacggttgtttgcaaacactggctccgagggctgtgcaagaaaggagac
cagtgcgagttcctgcatgagtatgacatgacaaagatgcctgagtgttatttctactcc
aaatttggggagtgcagtaacaaagaatgtccattcttgcacattgacccggagtctaag
atcaaagattgcccctggtatgacagaggcttctgtaaacacggtcccctctgcagacat
agacacactcgaagagtcatttgtgtgaattacctggtgggattctgtccggaagggcct
gcttgtaaattcatgcatcctcgatttgaactgcctatgggaaccacagagcaaccaccg
ctgcctcagccaacacaaccccagcaaaagcaaaataacaatccgccattacaaaggtca
tcatccttgatccagttaacgagtcagaactcttctcccaaccagcagaggaccccacaa
gtgatcggcgttatgcagtctcaaagcaacaatgtagggaacagaggtccccgtcccttg
gagcaggtcacttgttacaagtgtggtgaaaaaggacattatgccaacaggtgcaccaaa
ggacatctggcctttctcagtggacagtga
DBGET
integrated database retrieval system
