Carettochelys insculpta (pitted-shelled turtle): 142021450
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Entry
142021450 CDS
T11194
Symbol
CACNA1H
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1H
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Pathway
ciz04010
MAPK signaling pathway
ciz04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
142021450 (CACNA1H)
04020 Calcium signaling pathway
142021450 (CACNA1H)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ciz04040
]
142021450 (CACNA1H)
Ion channels [BR:
ciz04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
142021450 (CACNA1H)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
142021450
NCBI-ProteinID:
XP_074866332
LinkDB
All DBs
Position
16:complement(33566250..34060197)
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AA seq
2487 aa
AA seq
DB search
MTDGERREPVQPLASEDVRVPIASLPSQAAQPGEDEDALSACKSIQSSLGSGGSPARDPA
QEEEEQVPYPALAPTVVFCLKQTTRPRSWCLRLVCNPWFEHVSMLVILLNCVTLGMFQPC
EDVECKSERCTILEAFDHFIFAFFAVEMVIKMVALGIFGQKCYLGDTWNRLDFFIVMAGM
MEYSLDGHNVSLSAIRTVRVLRPLRAINRVPSMRILVTLLLDTLPMLGNVLLLCFFVFFI
FGIVGVQLWAGLLRNRCFLDSNLATTYNLSFLNPYYQPEEEGDLFICSSHRDNGMQKCSS
IPNLKKHRVECTLSMDFSNQNLYNQDFSNRNTCINWNQYYNVCEAGDVNPHNGAINFDNI
GYAWIAIFQVITLEGWVDIMYYVMDAHSFYNFIYFILLIIVGSFFMINLCLVVIATQFSE
TKQRENQLMQEQRARYLSNDSTIASFSEPGSCYEELLKYICHIFRKVKRRTLRLYNNWQS
KRRKKVNPNSAPNGQSRRSKKRITSIHHLIHHHHHHHHHYHISNGSPQGPRSNPEIGDLE
LKVMKPGSQLMLPSPSPNLRSPPPPLDSESVHSIYHADCHVEGPPVKCKSSNASASIKMT
AGLPTSHGNMNYPTILPSPASKASSAPVPKGKKNSSTPVAMVNSPVSLNADPFEKLHHLM
GEHGLCRTSSRLSGLNVPCALPSPQPSILSCELQNCPYCANILEDPEFEFSESDSYDSDN
NGVYEFTQDLRHGDQRDQIQQQRNKKKKKRKPKEKNKVARLWMAFGNKLKRIVESKYFNR
GIMIAILINTLSMGIEYHEQPDELTNALEISNIVFTSMFALEMVLKLLAFGIFGYIKNPY
NIFDGIIVIISVWEIIGQSDGGLSVLRTFRLLRVLKLVRFMPALRRQLVVLMKTMDNVAT
FCMLLMLFIFIFSILGMHLFGCKFSLKTDSGDTVPDRKNFDSLLWAIVTVFQILTQEDWN
VVLYNGMASTSSWAALYFVALMTFGNYVLFNLLVAILVEGFQAEGDANRSDTDEDKTSAN
FDEDFEKLKDLRATEMKMYSLAITPNGHVEGRASMPPPIIMRTAATPMPTPKCSPHMDSV
HTFVDSRRGSSASVGPLSYDQKSLSSLRSSPCTNWAPSSNWGSRRSSWNSLGRAPSLKKK
NQSGERESLLSGEGKGSTDDDSDDAKSSTVSRATLHRRAESLDYRSSLDLPELLQLPTLH
HSLSINPMAVLPAEYQDCNGKMVQVPSEFFLCIDNHKDDPLDYDDDMDDSYCYRIRKALE
PYKPEWCKNHEDWSLYSFSPQNRFRVMCQKVIAHKMFDHVVLVFIFLNCITIALERPDID
PHSTERIFLSISNYIFTAIFVAEMMVKVVALGFFSGENTYLQSSWNVLDGVLVFVSIIDI
IVSMASAGGAKILGVLRVLRLLRTLRPLRVISRAPGLKLVVETLISSLRPIGNIVLICCA
FFIIFGILGVQLFKGKFYYCEGSDTKNISTKADCINAHYRWVRQKYNFDNLGQALMSLFV
LSSKDGWVNIMYHGLDAVGIDQQPVKNHNPWMLLYFISFLLIVSFFVLNMFVGVVVENFH
KCRQHQEAEEARRREEKRLRRLEKKRRKAQRKPYYADYSPARRYIHTLCTSHYLDLFITF
IIGVNVITMSMEHYDQPKSLDEALKYCNYVFTIVFVFEAVLKLVAFGFRRFFKDRWNQLD
LAIVLLSIMGITLEEIEMNAALPINPTIIRIMRVLRIARVLKLLKMATGMRALLDTVVQA
LPQVGNLGLLFMLLFFIYAALGVELFGKLDCSEDNPCEGLSRHATFTNFGMAFLTLFRVS
TGDNWNGIMKDTLRECTREDKHCLSYLPVISPVYFVTFVLIAQFVLVNVVVAVLMKHLEE
SNKEAKEDAEMDAEIELEMSRGGTTLANSGGGSGTSASDVRVPHGSQEAMKPESPLRMKH
QALEALSCENVALAIPDSNPLEGGETPVMENTSFRSVPHHHVLTPSHNTPSHKSEEGAAG
LRAKRETQNFLTVRKISVSRMHSLPNDSYMFRPVMPAKAPYPLHEVEMETYSCKSQRGSI
TSIRSQPVGTCSSLRVPREPLQVTAVSSHCGSCDPWKISPAQSPSLNRLLYRQEAVQTDS
LEGQNTDSKDSLQVESNESLPPKKPSQSSSSPALLRPSPLSLPATPPHSPTSPVPHRPAS
VCTRKHTFSQHSIPSRPSSQNSSPASPDNSLFESSDLADEEVSHINSSVTDWQEPSDIRS
HSVSPFFSPSPSLVPLKNCSTTSLARSNGKEKDLKKFYSVDTKGFLDRPSWADDQRRHSI
EICPSIDDGDCSLEQPAEGKQRSPVHSQSESESIHGARRKKKMSPPCISIDPPMEDESNT
ASRTKASENSMLRRRTPSCESTTYRDSLDLADNPPGEQASKIERRVQPPCRGEHLTIPNF
SFEQSDPSSLSSLSELLLDSSLSTPASSADSRPDAAAPELKTLDHLKTQCNHPEKSKELL
GITKSPLRQPGLVPVTVATDDDIDEPV
NT seq
7464 nt
NT seq
+upstream
nt +downstream
nt
atgactgatggcgagaggagagagcccgtccagccgctggcgagcgaggacgtccgggtg
cccatagcttcgctccccagccaggcagcccagcccggggaggacgaggatgcgctcagc
gcctgcaagtcgatccagagcagtctgggctctggaggctccccggcccgggatccagcc
caggaggaggaggaacaggtcccttacccggccctggcccccaccgtcgtcttctgcctc
aagcaaaccacccggccgcgcagctggtgcctccgcctggtctgtaacccctggttcgag
cacgtcagcatgctggtcatcctgctgaactgtgtcaccttgggcatgttccagccctgc
gaggatgtggagtgcaagtcggaacgatgcaccatcctagaggcctttgaccatttcatc
ttcgccttcttcgctgtggagatggtcatcaagatggtggccctggggatctttgggcag
aagtgttacctaggagacacatggaaccgcctggacttcttcatcgtcatggccggcatg
atggaatattctctggatgggcacaacgtgagcttgtctgccatccgaactgtccgggta
ctcaggcctctacgagccattaacagggtcccaagtatgcgaatactcgttaccctgctg
ttagatactctgcctatgttaggcaacgtccttctcttgtgcttctttgtctttttcatc
tttgggattgtcggcgtgcagctctgggcagggctgctgagaaacaggtgtttcctagac
agcaaccttgcaacgacatacaacctttctttcctgaatccatattaccagccagaagag
gagggggatctgttcatctgctcgtcccatcgggataacggcatgcagaaatgctccagt
atcccaaacttgaagaagcacagggtggagtgcaccttgagcatggacttctccaaccaa
aatttgtataaccaagatttcagcaacaggaacacctgcataaactggaaccaatattac
aacgtatgtgaggcaggggatgtcaacccacacaatggagctattaattttgataacatt
ggctatgcctggatagctatttttcaggttataactctggaaggatgggttgacatcatg
tactatgttatggatgcacattctttttacaattttatatattttatattgcttataata
gtgggttctttcttcatgattaacttgtgcctggttgtgatagcaacacagttttctgaa
acaaagcagcgggagaaccagctgatgcaggagcagcgtgcccgctacctctccaacgac
agcacaatcgccagcttctcagagccaggcagctgctacgaagagctcctgaaatatatc
tgccacatcttccggaaggtaaagcggcggacattgcgtctgtacaacaactggcagagc
aaacgtcggaaaaaggtcaaccccaacagcgcccccaatgggcagagccgtagaagcaaa
aaacgcatcacctccatccaccacctcatccaccaccatcaccaccaccaccaccactac
cacatcagcaacgggagcccccaggggccacggtccaaccctgagatcggtgacctggag
ctgaaggtcatgaagcctgggagccaacttatgcttccctctccatcccccaacctgcgt
agccctcctcctcctctggattcagagtctgtccacagcatttaccatgctgactgccac
gtggaaggacccccggtgaaatgcaagtcttccaatgcctccgcaagtattaaaatgacc
gctgggctccccaccagccatggcaatatgaattatccaaccatcctgccttctccagct
agcaaagccagttctgccccggtacccaaagggaagaaaaatagcagcacccctgtggct
atggttaatagcccagtgagtctgaacgcagacccttttgagaagctccatcatctgatg
ggagagcatggtctatgcaggacgtccagcaggttgtcaggtttgaacgtgccatgcgct
ctgcccagcccccagcccagcatcctgtcctgcgaactccaaaactgcccctactgtgct
aatatcctggaagatcctgagtttgagttcagtgagtcggacagctacgactccgacaac
aacggcgtctacgaattcacacaggacctgcggcacggagaccaaagagatcagatccag
cagcagaggaataagaagaagaagaagaggaaaccaaaggagaagaataaagtagctagg
ctttggatggcttttggtaacaagctgaaaaggattgtggagagcaaatatttcaaccgc
gggattatgatcgccatcctgatcaacacgttgagcatgggaattgagtatcatgagcag
cctgacgaactgaccaacgctttggagatcagtaacattgtcttcaccagcatgtttgcc
ctggagatggtcctcaagctccttgcctttggtatcttcggttacatcaagaacccatac
aacatcttcgacgggatcatagtcatcatcagcgtctgggagatcattggccaatctgat
ggaggcctttctgtgctaagaacttttcgactgctcagggtcctcaagctggtacgcttc
atgcctgcccttcgccgccagctggtggtcctgatgaagacgatggataacgtggccacc
ttctgcatgctgctcatgctcttcatctttattttcagcattctcggcatgcatcttttt
ggatgcaagtttagcttgaaaactgattcaggggacacagttccggacaggaagaatttt
gactccttgctctgggccattgtgaccgtgtttcagatcctcacccaggaagactggaac
gtggtgctctataatggcatggcctccacctcctcttgggcagcactctattttgtggcc
ctgatgaccttcggcaattacgtactcttcaacctccttgttgccatcctggtagaaggc
ttccaggcagagggtgatgccaacaggtcggacacggatgaggacaagacatctgccaac
tttgatgaggattttgagaagctgaaagacctccgcgcaacagagatgaagatgtactcc
ctggccatcaccccaaacgggcatgtggagggcagggcgagcatgcctcctcccatcatc
atgcgcactgctgctactccaatgcctacgccaaagtgctcaccacacatggattcggtg
cacactttcgtggactccaggagagggagcagtgcttcagttggtcccctgagctacgat
cagaagtccttgtccagcctccgcagctcaccatgtacgaactgggcccccagcagcaac
tggggaagtcggcgctcaagctggaacagccttggcagggctccaagcctgaagaagaag
aaccagtcaggggaaagagagtccttgctctctggggaggggaaagggagcacggatgat
gactccgacgatgccaagtccagcactgtcagcagagccaccctgcaccgccgggcagag
tccctggattacaggagctccttggatttgcctgagcttctccagctccccaccctgcac
cactcactcagtatcaaccccatggccgtgctgcctgcagagtaccaggactgcaatggc
aaaatggtgcaagtaccaagcgagttcttcctgtgtatcgacaaccacaaggatgacccc
ttggactatgacgacgacatggacgatagttactgctacaggattcgcaaagccctggag
ccctacaaaccagagtggtgcaagaatcatgaagactggtccctctactcgttttcccct
caaaatcggtttcgagtgatgtgccagaaagttatagcccataagatgtttgaccatgtg
gttctggtcttcatctttctcaactgcatcaccattgcactagagaggcctgatattgac
cctcacagcacggagaggatatttctgagcatctccaattacatcttcacagcaatcttt
gtggctgagatgatggtgaaggtcgtggcccttggcttcttctctggggaaaatacgtat
ctccaaagcagctggaatgtcctggatggggtcctggtttttgtatccatcattgatatt
atcgtctccatggcgtcagctggcggagctaagattttgggtgtccttcgcgtcttaaga
ttgctgcggaccttgaggcctctccgagttatcagcagagccccaggtctaaaactggtg
gtggagaccttgatatcatccttgcggcctattggcaatattgtgcttatctgctgtgct
ttcttcattatctttgggatcttaggggtgcagctctttaaaggcaagttctactactgc
gaaggctcagacaccaaaaacatctccactaaagctgactgcatcaacgcgcactacaga
tgggtccggcagaagtacaacttcgacaatttagggcaggcgctgatgtccttgtttgtc
ctctcatccaaagacggctgggtgaacatcatgtaccatggcctggatgctgtgggaatt
gaccagcagcctgtcaagaaccacaacccctggatgcttctctacttcatctccttcctg
ctcatcgtcagcttctttgtactcaacatgttcgtgggagtggtcgtggagaacttccac
aagtgccggcagcaccaggaagctgaagaggcccgtcggcgggaggagaagcggctgagg
cgtctggagaaaaagcgcaggaaagcccagcgcaaaccctactatgctgactattctcca
gcacggaggtatatccacaccctttgcaccagccactatctggacctgttcattacgttc
atcattggtgtcaatgtcatcacaatgtccatggagcactatgaccagcccaagtccctg
gacgaagctctgaagtactgcaactatgtgttcaccatagtatttgtgtttgaagctgtt
ctgaagttggtggcgtttggttttcgaagattcttcaaagacaggtggaaccagctagac
ctggccatagtcctcctctccattatggggatcacgctggaggaaatcgaaatgaacgcc
gcactccctatcaatcccacgatcatacgcatcatgcgggtgctgcgcatcgcaagagtg
ctgaaactgctcaaaatggccacgggaatgcgagctctcttggacactgtggtgcaggcg
ctaccccaggtagggaaccttggcctactttttatgctcctgttttttatctatgctgcc
ctgggagtggagctgtttggaaagctagattgcagcgaagacaacccttgcgaaggtctg
agccggcatgcaaccttcaccaactttggcatggccttcctcaccctcttcagggtgtcc
actggtgacaactggaatgggatcatgaaggacacgctgcgggaatgcaccagggaggac
aagcactgcctcagttacctgcccgtcatttcccctgtctacttcgtcacctttgtcctc
atcgcccagtttgtcctcgtcaacgtggtggtggccgtgctgatgaagcacctggaggag
agcaacaaggaagccaaggaggatgcggagatggatgcggagatagagctggagatgtcc
agaggagggaccaccctggctaacagtgggggtggaagtggtacctctgcctcagatgtc
agggtcccccatgggagccaggaggccatgaagccagagtcccccctgcgaatgaaacat
caagccctggaggcactgagctgtgagaatgtggctttagctatccctgactccaacccg
ctggagggaggagagactcccgtgatggaaaacacgtctttccgctctgttcctcaccac
catgtcctgacaccttcccacaacacccccagccacaagtcagaggaaggcgctgccggc
ctaagagcaaagagagaaactcagaacttcctgacggttcgcaagatctctgtatcccgg
atgcactccttgcccaatgacagctacatgtttcgccctgtgatgccagccaaagcccca
taccctctccatgaggtggagatggagacctattcctgcaaatcacaaagagggtccatc
acctccatccgctcccagcctgtgggaacctgctcctctctcagagtcccaagggagccg
cttcaggtgacagctgtatcttctcactgtggcagctgtgacccatggaagatctctcct
gcacagtctcccagtctcaaccggctgttgtatagacaggaggccgttcagacggattcc
ttggaagggcagaatacagattccaaggacagtcttcaagtggagtccaacgagagcctg
ccaccaaagaagccgtcccagagcagctccagtcctgctttgctccgtcctagcccgctg
tccctgccggccactcctccgcattccccaacatcgcctgtgccccatcgacccgcgagt
gtttgcacacgcaagcacactttcagccagcacagtattccaagcaggccttccagtcag
aacagcagcccggccagccccgacaactccctgtttgaatcctccgacctggcggacgaa
gaagtcagccacatcaacagctcggtgacagactggcaagagccatccgacatcaggagc
cactcggtctctcctttcttctccccgtccccatctctggtcccactcaagaactgcagc
acaaccagcctggccaggagcaacggcaaagagaaagacttgaagaagttctacagtgtt
gatacgaaagggttcctggacaggcccagctgggcagatgaccaaagaaggcactccatc
gagatctgcccttccattgatgatggagactgtagcttggaacagcctgcagaggggaag
cagaggtcccctgtccacagtcagtcggagtcggagtctatccacggggctcggaggaag
aagaagatgagcccgccttgcatttctatagatcctcccatggaggacgaaagcaacacg
gcatcgcgtaccaaagcctctgagaacagcatgctgagaaggaggaccccatcctgcgaa
tccaccacgtacagggactccttggacctggctgacaatccgccaggggagcaggcctct
aaaatagaacggcgggtccagcccccatgtcgaggggagcacctgaccatcccaaacttc
tccttcgagcagtctgaccccagctccctgagcagcctctcagagctccttttggacagc
agcctgtccacgcctgcctcctctgcggactcccggccagacgctgcagcgccagaactg
aaaacgctggaccatttaaaaactcagtgcaaccaccctgagaaaagcaaagagctgcta
ggcattactaagagccccttaagacagcccggactggtgcctgtgactgttgcgacagat
gacgatatagatgaaccagtatag
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integrated database retrieval system
