Carettochelys insculpta (pitted-shelled turtle): 142021611
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Entry
142021611 CDS
T11194
Symbol
CIITA
Name
(RefSeq) MHC class II transactivator
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ciz01001
]
142021611 (CIITA)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
ciz04054
]
142021611 (CIITA)
Enzymes [BR:
ciz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
142021611 (CIITA)
Protein kinases [BR:
ciz01001
]
Serine/threonine kinases: Other
TAF1 family
142021611 (CIITA)
Pattern recognition receptors [BR:
ciz04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
142021611 (CIITA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
NLRC4_HD2
LRR_4
LRR_14
NB-ARC
LRR_8
LRR_9
nSTAND_NTPase5
CARD
RsgA_GTPase
AAA_16
AAA_19
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
142021611
NCBI-ProteinID:
XP_074866756
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All DBs
Position
16:14265902..14366206
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AA seq
1278 aa
AA seq
DB search
MNTFKEILPGVREILSSATTSEVHELLSCMLEGDVISKEYYQNLIQEKDREDLARKISLT
LVERWDMCLNTFAPLHCLNVCSNIPQDITDTEPSLNRGIDGSKRQTMDSAVLTENGFLDL
LHSNIDPLHLYSLLDTRLSAEDEESELSNDPEIDTINHDQFSSLDVFYTMESNESEEESL
FSNTGDAYSRIAGLAEYVLKDQQERQMEDIFGKLILDEMSSESTEAFTEIKTQKCQKRSS
MNTAENYSDASKPKCRRTDAAKREKERTAGFRAVGDISDTCKDRVESPGSTVNGSFVAVP
LNSYPAHSTSVSHLHMQFSVSSVSPTGKNVLMPVSSGNSNPDCLPVGAKSLQVISSFAVV
PQQRINLPAGNGAANIIIYPGSSSHTEISQISPGFLPTLAAQVDLAFQTILGSPDENTSM
GPFAYMQDTATVTDHSGEEIYSEISQIPDVPSEQIFKRPKQVEAFCTSLKDYFQDVCKFV
AMDREVTLDQLYVDGALMQSQTDTKSGKNVIKVMEKELVIYNIEEKEKAILERSQIFQVP
GGKELETKVIVVLGKAGMGKSILVQKICQDWSNGKFSQFEFAFWFECKRLSLPEKQYRLK
DLLLELFVKPREGSDKIFEYILQNPSKVLLIFDGFEELQDHDGFTHYSDCQSYKELYSIR
ELFAGLFQKKILNGCTLLLTARPKDKFNQYLSKVDKIIEMVGFTPHQIESYITRYFEGLP
YCDAAVKLITDCQYLFSHCYNPVMCRFFCFLCEMMFEMGDKDLPSTLTGLFVKYLQQKLM
PTQTDTKSIRNQQHITRLAQVAWCLGEKNQNALKSSLFPSTEIKEFALKYGLVLPFTFPK
HSGNGEEEFGSVFSDFVIQNFLSAIHLVLAKEIKDKSLTKYLSLPPRKKKPHSWLDLVPR
FLPGLLYLQSDQYLLSLSDEHVRKIITKKQKTLLKYIKKIQISDLHPEKLLELFHCVYET
QDSYLLRHVALRLKPELSFLGTLLTPPDVYVLHFILKSSQKAFTLDLRKSGINLEGLKHL
VGLKSVTSFRASLSDAVRLWESLEEAKEYELLRTSVEKFGIDPFKAETLKDISDLCDLVQ
MQEKVIHCIEDASGYNMHEIPAIKNLRKLEFALGPVCGLQGFLKLVEILAAFPSLQHLDL
DALSENEIGDEGTKSLCEVLSELTSLETLNLSQNKITDLGAEQLATALPSLSSLKTLSLY
NNYICDAGAENIARMLPAMASLKVLHVQCNKITDAGAQKLTESLRRCPHIESVTMWNPTI
PYGVLEHLQQLDPRISLL
NT seq
3837 nt
NT seq
+upstream
nt +downstream
nt
atgaatactttcaaagagatactgcctggagtcagggagattctttccagtgccactact
tctgaggtccatgaattgctcagctgcatgttggagggagatgttatatccaaggaatac
tatcagaacttaatccaggaaaaagacagagaagacctagcaagaaagatatctctaaca
cttgtggaaagatgggacatgtgcttgaacaccttcgcgcctctccattgtttaaatgta
tgcagtaatataccacaagacatcacagatactgagccatctctgaataggggaatagat
ggtagcaaaagacaaaccatggattcagcagttttgactgaaaatggctttcttgatttg
ctgcacagcaatattgatccattgcatctatacagcctcttggacacaaggttatctgct
gaagatgaagaaagtgaactttcaaacgaccctgaaattgacacgatcaaccatgaccag
ttcagcagtttggatgtcttttatacaatggaaagcaatgaaagtgaggaagaatctctc
ttttcaaatacaggagacgcttattctagaatagctggcttagccgaatatgtgctcaaa
gatcagcaggagagacagatggaagacatttttggaaaactcattttggatgaaatgtcc
agtgaatcaacggaagcttttacagagataaagacgcaaaaatgtcaaaaacgatcatcc
atgaacactgcagagaattactctgatgcttccaaacccaaatgcaggagaacagatgct
gcaaagagggagaaggaacgtacggcaggcttccgagctgttggggatataagtgacact
tgtaaggacagagtggagtcccctggatctacagtgaatggcagttttgtggcggtgcct
ctgaacagctacccagctcactccacctctgtttctcatctgcatatgcagttttctgtt
tccagtgtaagtccaactggaaaaaatgttctgatgccagtgtcttctggaaattccaac
ccggactgtctgcctgttggtgctaagagccttcaagtgatatccagctttgcagttgtt
ccacaacagagaattaatttgcctgcagggaacggtgcagccaatataataatatatcca
gggtcctcctcccacactgaaatttcacagatatcacctggtttcctcccaaccctggct
gctcaagtggacttggctttccaaacaattttggggtctcctgatgaaaacacctccatg
ggcccatttgcttatatgcaagatactgcaactgtgacagatcattcaggagaagaaata
tacagtgaaatatcacaaattcctgatgttccttctgaacaaattttcaaaaggccaaag
caagtggaagctttctgcacatcacttaaggattatttccaggatgtgtgcaaattcgtg
gccatggaccgtgaagtaactcttgatcaactttatgttgatggggctctcatgcaaagc
caaacagatacaaagagcgggaaaaatgtcatcaaagtgatggagaaggagctggtcata
tacaatatagaagagaaggaaaaagcgattttagaaagaagccaaatatttcaagtccca
ggaggaaaagaactagagaccaaagtcattgtggtgttgggaaaggctggaatgggtaaa
agcattcttgttcaaaagatctgccaagactggtccaatggaaagttttctcagtttgaa
tttgccttttggtttgagtgcaaacgactgagcctgcccgagaagcaatacagattgaag
gacctgcttcttgaactctttgtcaaacctcgagaaggaagtgacaaaatctttgagtac
atactgcaaaatcccagtaaagttctactcatcttcgatggtttcgaagaattgcaggat
catgatggctttacacattattccgactgccagtcttacaaggagctgtacagcatcagg
gagctctttgcagggctcttccagaaaaagatactcaatggttgtactttattgctaaca
gcaagacccaaagacaaatttaatcagtatttatcgaaagtggataagatcattgaaatg
gtagggttcactccacaccagatagaatcatacataaccagatattttgaagggctacca
tactgtgatgctgcagtgaaattaatcacagattgtcagtatttgttcagtcattgctac
aaccctgtcatgtgtagattcttttgttttctctgcgagatgatgtttgaaatgggagac
aaagacctgccctcaacacttactggcctcttcgtaaaatacctccagcaaaagctgatg
cccacacaaacagatacaaaatccataagaaatcagcagcacattaccaggctagctcag
gtagcctggtgccttggagaaaagaatcaaaatgccctgaaaagcagtctttttccctct
acagaaattaaggagtttgctctgaaatatggcttagtattgccatttacatttccaaag
cattcagggaatggagaggaagaatttgggagtgtattctcagactttgttatccaaaat
tttttgagtgcaattcatctggtgctcgcaaaagagatcaaggataaaagcctcacaaag
tacctttcattgccacccagaaagaaaaagcctcatagttggttagacttggtgcctcgg
ttcttgcctggattattatatctccagtctgatcaatacctcttgtctctttcagatgag
catgtaagaaaaatcataaccaagaagcagaaaacactcttaaaatacattaaaaaaata
cagataagtgatctccatccagaaaagctacttgagctgttccactgtgtttatgaaaca
caggacagctatcttttgcggcatgtggctttaaggctgaagcctgaactttcttttctg
ggcacacttcttacaccccctgatgtctatgtgctgcattttattttaaaaagttcacaa
aaggcatttaccttggatttgagaaagagtggcattaacctagaagggctgaaacacctg
gttggcctaaagagtgtgacttcattcagggcttccctgagtgatgcagtcaggctctgg
gagtccttagaggaagcaaaggaatatgagctgctgaggacttctgttgagaaatttggt
attgatccgtttaaggcagaaacactgaaggatattagtgacctttgtgaccttgtacag
atgcaagagaaagtgatacactgcatagaagatgcttccggctacaatatgcatgaaatt
cctgctatcaaaaaccttagaaaactggaatttgcgctgggtccagtctgtggccttcag
ggattcttaaaacttgtagaaattcttgcagcattcccatctctgcagcatttagaccta
gatgctctgagtgaaaatgaaattggagatgaaggaacaaaaagcctctgtgaagtactt
tctgaactgacatccctggaaacactgaacttatctcagaacaagataacagatctgggt
gctgagcaactagctactgctcttccctccttatcttcgttaaagacgcttagtttgtac
aataactacatttgtgatgctggagcagaaaatattgcaagaatgcttcctgcaatggca
tcgttaaaagtgctacatgttcagtgtaacaagataactgatgctggagcccagaaactg
actgaaagcctcagaagatgcccccacatcgagagtgtgacgatgtggaatcctactata
ccttatggcgttcttgagcaccttcaacagctggatcccagaatcagtttgctgtag
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integrated database retrieval system
