Carettochelys insculpta (pitted-shelled turtle): 142022005
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Entry
142022005 CDS
T11194
Symbol
DDX27
Name
(RefSeq) putative ATP-dependent RNA helicase DDX27
KO
K13181
ATP-dependent RNA helicase DDX27 [EC:
5.6.2.7
]
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ciz03041
]
142022005 (DDX27)
03009 Ribosome biogenesis [BR:
ciz03009
]
142022005 (DDX27)
Enzymes [BR:
ciz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
142022005 (DDX27)
Spliceosome [BR:
ciz03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
142022005 (DDX27)
Ribosome biogenesis [BR:
ciz03009
]
Eukaryotic type
Pre-60S particles
Helicases
142022005 (DDX27)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
RNase_PH
PRK
TilS_C
Motif
Other DBs
NCBI-GeneID:
142022005
NCBI-ProteinID:
XP_074867497
LinkDB
All DBs
Position
17:404173..416463
Genome browser
AA seq
760 aa
AA seq
DB search
MLRALGLVPSLAEGDAGPEEPEPEPESGDSADEAGPPGRGQQRRRGGDFSAGFVFAEREA
AGAASGAWAEALRQLGRKRAATTLDEKIEKVRKKRKTQEREGKHVKVKGEETVEEDEAKE
KESEEGSGEEEEDVESDCSSADESILAKADTLKVKKRKRQKKGGPIEAERFFEDASQYDD
DLSFQDMNLSRPLLKAITTLGFEQPTPIQKACIPVGLLGRDICACAATGTGKTAAFTLPV
LERLIYKPRQAPVIRVLVLVPTRELGIQVHSVTKQLAQFSNTTACLAVGGLDVKSQEAAL
RSGPDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEIIRLCSHHH
QTMLFSATMTDEVKDLAAVSLKNPVRIFVNSNTEVAPFLRQEFIRIRPNREGDREAIVSA
LLTRTFRDHVMLFTQTKKQAHRMHILLGLMGLQVGELHGNLSQTQRLEALRRFKDEQIDV
LVATDVAARGLDIEGVKTVINFTMPNTTKHYVHRVGRTARAGRAGRSVSLVGEEERKMLK
EIVKTAKIPVKARILPQDVIVKFRQKIEKLEKDVYAVLCLEREEREMQQSEAQINMAKNR
LEAGQQTAEEKLERNWFQSQEERKKEKLAKALQEFDLALRGKKKRRKFVQDTQKKGPMTP
EERSQFEILKSQMYAERVAKRNRRAKRARAVPDDEPPSVAGAGPKWKKQSSVFDEELTNT
SRKALKQYRAGPSFEERKRLGLAQHRKGWNFKSKSRYKRK
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgggcgctgggcctcgtgcccagcctggctgagggggacgcggggccggaggag
cccgagcccgagcccgagtccggggattcggcggatgaggcggggccgcccggccggggg
cagcagcggcgccgcggaggggacttcagcgccggcttcgtcttcgccgagcgggaggct
gcgggcgcggcgagcggggcttgggcggaggcgctgcggcagctcgggaggaagagagca
gcaacaacactggatgagaagattgaaaaagtgaggaaaaaaaggaaaacccaggaaagg
gaaggtaaacacgttaaggtgaaaggggaagagacggtggaggaggatgaagccaaagag
aaggaaagtgaggaaggcagtggagaagaggaggaggatgtggagtctgactgttcctca
gcagatgagagtattctcgccaaagcagataccctcaaggtgaagaagcgaaagagacag
aagaaaggaggaccaatagaagcagagagatttttcgaagatgcgtctcagtatgatgat
gacttgtcattccaggacatgaacctctctcgcccactgctaaaggcaatcacaaccctg
ggcttcgagcagccaacacccatccagaaggcctgtatccccgtgggtctgctgggaagg
gatatttgtgcttgtgctgccactggaacaggtaaaacagctgcattcaccttacctgta
ctggagcgcttgatctacaaacctcgtcaggctccagtgattagggtgttggttctggta
ccaacacgggagttgggcattcaggtgcactctgtcaccaagcagctggcccagtttagc
aacaccacagcctgcctcgctgtggggggcttggatgtgaagagtcaggaggcagctctg
cgctctggaccagacattctcattgccacccctggacgcctgatagatcatctccacaac
tgcccctctttccatctgagcagcatcgaggtgctgatcttggatgaggcagacaggatg
ttggacgagtactttgaggaacagatgaaggagataattcggctgtgttcccaccaccac
cagaccatgctgttttctgctaccatgacagatgaggtgaaggatttggctgctgtttcc
ttgaagaatcctgttcggatttttgtaaatagcaatacagaggttgcccctttcttgcgg
caggaattcatccggatccgtcccaatagagaaggggacagagaggctatcgtgtcagct
ctgcttacgcggactttcagagaccatgtgatgcttttcactcagaccaagaagcaggcc
catcgcatgcacatccttctggggctgatgggtctacaagtgggagagctgcatggaaac
ctctctcagacacagcgcctagaggctctccggcgctttaaagatgagcagattgatgtc
ctagtagccacagatgttgcagcccgaggactcgatatcgagggtgtgaaaacagtgatc
aatttcaccatgccgaacaccaccaagcactatgtgcatcgggtggggcgtaccgcacgg
gctggtcgggctggccgctcagtctcattggtgggtgaggaggagcgcaagatgctgaag
gagattgtgaagacagccaagattccagtgaaggccagaatcctccctcaggatgtgatt
gtgaaattccggcagaagattgagaagctggagaaagatgtgtatgcggtattgtgccta
gagcgtgaggagcgtgagatgcagcagtcagaggcacagatcaacatggcaaagaaccgt
ctagaggcaggacagcagacggcggaagagaagcttgagcggaactggttccagagccaa
gaggaaaggaagaaagagaaattggctaaagcccttcaggaatttgacttggcattaaga
ggaaagaagaagaggaggaaatttgtgcaggatactcagaaaaaaggcccaatgacacca
gaggagagatcacagtttgaaatcctgaagtcacagatgtatgcagagcgtgtggcaaag
aggaaccgccgagcaaagagagctcgagctgtgccagatgatgagcctccttcagttgca
ggagcaggccccaaatggaagaagcagtcatctgtgtttgatgaggagctcaccaacaca
agcaggaaggccttaaaacagtatcgtgctggcccctcctttgaagagcggaagcgtttg
ggcttagcccagcacaggaaagggtggaacttcaaatccaagtccaggtataagaggaag
tga
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