Carettochelys insculpta (pitted-shelled turtle): 142022085
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Entry
142022085 CDS
T11194
Symbol
CHD6
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 6 isoform X1
KO
K14436
chromodomain-helicase-DNA-binding protein 6 [EC:5.6.2.-]
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ciz03036
]
142022085 (CHD6)
Chromosome and associated proteins [BR:
ciz03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
142022085 (CHD6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
Chromo
BRK
ResIII
HTH_Hrp3
DEAD
HDA2-3
MUN
Chromo_MIT1
Motif
Other DBs
NCBI-GeneID:
142022085
NCBI-ProteinID:
XP_074867666
LinkDB
All DBs
Position
17:complement(31593236..31803191)
Genome browser
AA seq
2716 aa
AA seq
DB search
MIMKIQKIEKQLGHSLMSGTSLPCEHKPQAPFASSTDQEDLHPHRNVADLASHYQCPEEE
PGEAEQQRALSQNGMQDSGGGGTGVKKKRKKKAVGELEVGEKGALEREVKPKRKREPKEP
KLPKKPREPKKPREPKQKEAAKKPRKPREAKVPKEPKEKKSSTEGAPKAKPKKTSKEQGP
TPLEKKKKGKRKNEIPVESLELDQDLSLGLQSPEESAESADSQKRRSGRQVKRRKYNEDL
DFKVVDDDGETIAVLGAGRASALSASTLAWQAEEPPEDDANIIEKILASRLVQKEVHPGG
LAYEMEEFYVKYRNFSYLHCKWATLEELEKDPRISQKIKRFRNKQAQMKHLFMEPDEDLF
NPDYVEVDRILEVAHTKDSDTGEEVTHYLVKWCSLPYEESTWELEEDVDPGKIKEFQSLQ
IPPEIRHVERPASESWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYNRKNCILADEMGL
GKTIQSITFLSEIFLMGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHGSQISRQMIQ
QYEMVYRDVQGNPLPGIFKFQVVITTFEMILADCPELKKIQWRCVVIDEAHRLKNRNCKL
LEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPQQFPSETAFLEEFGDLKTEEQVKK
LQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLSKGANQHN
MPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSPEALDFQLQAMIQAAGKLVLIDK
LLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCKPDS
DRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITR
NSYEREMFDKASLKLGLDKAVLQDINRKGSTNGVQQLSKMEVEDLLRKGAYGALMDEEDE
GSKFCEEDIDQILQRRTQTITIQSEGKGSTFAKASFVASGNRTDISLDDPNFWQKWAKIA
ELDTDAKNEKESLVIDRPRVRKQTKHYNSFEEDELMEFSELDSDSDERPTRSRRLNEKTR
RYLRAECFRVEKNLLIFGWGRWKDILTHGRFKWHLNEKDMEMICRALLVYCVKHYKGDEK
IKSFIWDLITPTKDGQNQALQNHSGLSAPVPRGRKGKKTKNQMLLPEIKNADWLASCNPE
IVLHDDSYKKHLKQHCNKVLLRVRMLYYLKAEVLGEVADRAFEGTPARELDVLLPDIDYV
EIPVDWWNAEADKSLLIGVFKHGYERYNAMRADPALCFLEKVGMPDEKLLSAEQGVSDGA
QEAAERANMEKEENSGDRAEGLPQQEDSGNLNEDVEKQDSSVAAQDGSNSDRSCWPVSSA
LTARLRRLVTIYQRCNRKELPPRAEMLVPSNHGYWLPEEMFRRAAEMDPANKEMQKRWTR
REQADFYRTVSSFGVIYDQEKKAFDWTQFRAISRLEKKTDESLEKYFYSFVAMCRNVCRL
PLWKEDGPPDPSIYVEPITEERAARTLYRIELLRKVREQVLKYPQLHERLKLCRPSLYLP
VWWECGKHDRDLLLGTAKHGLNRTDYYIMNDPELSFLDAYRNYAQHKRAGVPGPENLCCL
HQMNSKLYSSPSYCQMERTCEPLESEAESQIKLENLEDALSRVEDSPQDTSCDTFLSTVR
DIISMNCDESSLPDSLMCMMYEEKACPSEHSSLTQDSPSCTHVSNSAAKFAEGKLEGDED
PSSCEAEAIRETSFLETLQISCDQMDSPSEGGEPWPSASASQSSRSVPTETGDALEQASP
EPRLPELTSAEGVISLGLYGPSLHNLEIKIPPEQRFVDLLHKKGLEDKSVPSQSHSEEEE
EEEEERSEMAADALEGLRVTPNARIDGDPKANMPAEEEPGFSLPTSQINCLGMNGEAEAS
GQGASQCNSGEGDGEPDHDSPAEHSPQSPRPAATPQPELPKAVPTSRGRECWEAGSAAQM
GGNVAWHLEGHKLQLEDDECENKDEEEKECTSQSQDCPEKYMAEKSKSLPCAQPTDVEEL
QDIRAPTIAQLLQEKTLYSFSEWPKDRVIINRIDNICHAVLKGKWPSSNQQFEPQTLMPT
PVLASSTGTRSSFAEPEVPAPSFSNGMLVTQESFLAPPAFTKDERKHRQPYEFELERDAK
PRSLEQLAASHPRPPVVLNGWRDSAGNLARVSEGSPGNLSPFPLNSNLPKLGTVHSLQGS
LGMDLSGILQAGLIHPVTGQIVNGSLRRDDAAMRRRRGRRKNVEGMDLTFLKERSLQNGL
QDAQEDQTQPAQSSPHPDRPVTATSTPHTVTAPSIRAEKAVPNKSLLDWLRQQTDYTLDV
PGFSTSFSDKPKQRRQRCKDPSKLDINSLTGEERVPVVHKGTGRRLGGAMAPALKELPRW
LDANLEYAVAADWADIVKLSGFLPENKFNRILTEPVLRDTGPRRRGRRPRSELIKAPGVI
SDSSSGMGPLFMNGLIAGMDLVGLQNMRNMQGIPLAGLVGFPAGFAAVPTGEDVKSTLNM
LPMMLPGMATVPQMFGVGGLLSPPMTTTCTSTAPASLTSTTKSGTSNTEKATEDKQSSQD
AKNEPLSEDKPGPTSFSDQTEPAITTSSPVAFNPFLIPGMSPGLIYPSMFLSSGIGMPLP
GIQQTRHTEATTLESQKRKKKKAKVEQTNPESETISLSEKDAANSPNFTEKTLSLSSEKE
HAIPAEEELKVINNTN
NT seq
8151 nt
NT seq
+upstream
nt +downstream
nt
atgataatgaaaatacagaagatagaaaagcagctcggtcattccctgatgtctggcacc
tcgctcccttgtgagcacaagccccaggccccctttgccagcagcaccgaccaggaggac
ctgcacccccacaggaatgttgcagacttggccagtcactaccagtgcccagaagaggag
cctggcgaggctgagcagcagagggcactatcccagaatggcatgcaggacagcgggggc
gggggcaccggggtgaagaagaaacggaagaaaaaggccgtgggggagttggaagtgggg
gagaaaggagccctggagagagaggtgaagccaaagaggaagagagagcctaaagagcca
aagttgcccaagaaacccagggagcccaagaaacccagggagcccaagcaaaaggaggca
gccaagaaacccaggaaaccccgggaggccaaagtccccaaggagcctaaagaaaagaag
agcagcactgagggggcccccaaggcaaaacccaaaaaaaccagcaaggagcaaggacca
acccctctggagaagaagaagaaagggaaaaggaaaaacgagatcccagtggagagtttg
gaattggatcaagacctgagtctgggtctgcagagtcctgaggagtctgctgagtcggct
gacagccagaagcgccgctcaggccgccaggtgaagcggaggaagtacaatgaggacctg
gatttcaaagtagtggatgacgacggagagacgatagcagtgctgggagctgggcgagcc
tctgcgctctctgcatccacgctggcatggcaggcagaggagccccctgaggatgatgcc
aacatcattgagaagatccttgcctccagactggtgcagaaggaggttcacccgggcggc
ctggcctatgagatggaggaattctacgtcaagtacaggaacttctcctacctgcactgc
aagtgggcaacgctggaggagctggagaaggaccccagaatctcccagaagataaagcgc
tttcggaacaagcaggcccagatgaagcatctcttcatggagcctgatgaggatttgttc
aacccagactacgtggaggtggatcggatcctggaggtggctcacacgaaggactccgac
actggggaggaggtgacccactacctggtcaagtggtgctcgttgccatacgaggagagc
acctgggagctggaagaagacgttgaccctggaaaaatcaaagagtttcagtccttgcag
atcccaccggagatcagacatgtggagcgcccagcttccgagtcctggcagaaactggag
aagtctcgggaatataagaatagcaaccagctgcgggagtaccagctggaggggatgaac
tggctactctttaactggtacaacaggaagaactgcatcttggcagatgagatgggcctg
gggaagacaatccagtcaatcaccttcctctctgagatcttcctgatgggcattcatgga
cccttcctcatcatcgcgccgctctccaccatcactaactgggagcgggagttccgcacc
tggacggagatgaatgccatcgtgtaccacggcagccagatcagcaggcagatgatccag
cagtatgagatggtgtacagggatgtgcagggaaaccctctcccagggatcttcaaattc
caggtggtcatcaccacctttgagatgatcctggcagactgtccagagctgaagaagatc
cagtggcgctgtgtggtcatcgatgaggcccatcggctgaagaacaggaactgcaagctt
ctggaggggctgaagctcatggctctggaacacaaggtgctgctgactgggacgcccctg
cagaactccgtggaggagctcttcagcctgctgaacttcctggagccccagcagttccct
tccgagacagcttttctggaggaatttggagacctgaagacagaggagcaggtgaagaag
ctgcagtcaatcctgaagcccatgatgctgcggcggctgaaggacgatgtggagaagaac
ctggcgcccaagcaggagaccattattgaggtggagctgaccaatattcagaagaagtac
taccgggccatcctggagaagaatttctccttcctgtccaagggggccaaccagcacaac
atgcccaacctcatcaacactatgatggagctgcgcaagtgctgcaaccacccctacctc
atcaatggggcggaggagaaaatcctggaagattttcgtaagacgcacagcccagaggca
ctagacttccagctgcaggccatgatccaggcggctgggaagctggtgctgattgacaag
ctgctgcccaagctgattgctggtgggcacaaggtgctgatcttctcccagatggtgcgc
tgcctggacatcctggaggactatctcattcagagacggtacacctatgagcgcatcgat
gggcgggtgcgtgggaacctgcgccaggctgccattgatcgcttctgcaaaccagattca
gaccgctttgtcttcctcttgtgcaccagagcaggaggcctgggcattaacctcacagct
gccgacacctgcatcatctttgattctgactggaacccacagaacgacctccaggctcag
gcacgctgccaccggatcgggcagagcaaggcggtgaaggtctatcgcctcatcaccagg
aactcctacgagcgcgagatgtttgacaaggccagccttaagttgggcctggacaaggcc
gtgctgcaggacatcaaccgcaagggcagcaccaacggggtacagcagctctccaagatg
gaggttgaggacttgctacggaaaggagcatatggagcgttaatggacgaggaagatgaa
ggctccaagttctgcgaggaagatatagatcagatcctgcagcgcagaacccagacgatc
actatccagtcggaggggaagggctccacctttgccaaggccagcttcgtcgcttcaggg
aatagaaccgacatttccttggatgaccccaacttctggcagaagtgggctaagatagca
gaactggacacagacgcgaagaatgaaaaggagagcttagtcattgacaggccccgtgtt
cgtaagcaaaccaagcactacaattccttcgaagaagatgaactcatggagttctcggag
ctggacagtgactccgatgagcggcccacacgctcacggcgcctcaatgagaagacccgg
cgctacttgcgggccgagtgctttcgtgtggagaagaacctgctcatattcggctggggt
cgctggaaggatatcctgacccatggacgattcaagtggcacttgaatgagaaggacatg
gagatgatttgccgtgccctgcttgtctactgcgtgaaacactacaagggcgatgaaaag
attaagagttttatctgggatctgatcacgccgacaaaggacggccagaaccaggccctg
caaaatcactcagggttgtcggccccagtgcccaggggcaggaaggggaagaagacgaag
aaccagatgctgctccctgagataaagaacgcggactggttggccagctgcaaccctgag
atagtcctacatgatgacagctacaaaaagcatctgaagcagcactgcaacaaggtgctg
ctgcgggtgcgaatgctctactacctgaaagctgaagtgctgggagaggtggctgacaga
gcctttgaagggacgccagcaagggagctggatgtgctgctgcccgacattgactatgtg
gagatcccagtggactggtggaatgcggaggccgataaatcactgcttattggagttttc
aaacatggttatgagaggtacaatgccatgcgagcagacccagcactgtgcttcctggag
aaggtgggcatgccagatgagaagctgctgtctgcggagcagggtgtcagcgatggggca
caggaggctgcagaaagggcaaacatggagaaagaggagaacagcggagacagagctgag
gggctgccgcagcaggaggactctgggaatttgaatgaagatgtcgagaaacaggacagc
agtgtggcagcccaggatggctccaactcagacagatcctgctggcctgtctcgtccgcc
ctcacagccagactgcgacggctcgtcacaatctaccagcgatgcaaccgcaaggagctg
cccccccgagccgagatgctggtgcccagtaatcatggctattggctgcccgaggagatg
ttcaggagagctgctgagatggacccggcgaacaaggaaatgcagaaaagatggacaaga
agggagcaggcagatttctaccgcactgtctcctcctttggggttatctatgaccaggag
aagaaggcctttgactggacccagttccgagccatttcccgcttggagaagaagacggat
gagagcctggagaagtacttctacagctttgtagctatgtgcaggaatgtgtgtcgcctt
cccctctggaaagaggatggtccacctgatcccagcatctatgttgagccaatcacagag
gaacgtgctgcaagaacactgtaccggattgaacttctacggaaggtccgggagcaagtg
ctcaagtacccacagctccatgagcggctcaagctgtgcaggcccagcctatatcttcct
gtctggtgggagtgtggcaagcatgatcgggacctgctgctcggcacagcaaagcatggg
ctgaaccgcaccgactactacattatgaacgatcccgagctgtcatttttggatgcgtac
agaaactatgctcagcacaaaagagcaggtgtcccaggcccagagaacctatgctgcctc
catcagatgaactccaaactctacagctccccttcctactgtcagatggaaaggacctgt
gagcccctggaaagtgaagctgagagccagattaagctcgaaaacctggaggatgccctg
tcccgggtggaggacagccctcaggacacaagctgtgacacattcctgtcaacagtgcgg
gacatcatttccatgaactgtgatgaaagctccttgccagactctctgatgtgcatgatg
tatgaggaaaaggcatgccccagtgagcacagctctctcacccaggacagccccagctgc
acacatgtcagcaacagtgcagccaaatttgctgagggaaaactagagggggatgaggac
ccatccagctgtgaggctgaggccatcagagagacctctttcctggagaccttgcagata
agctgtgatcaaatggacagtcccagtgaaggtggggagccttggccctcagcctcagcc
agccagtcctccaggagtgtccccactgagactggtgatgccttggagcaggccagccca
gagcccaggttacctgagctcaccagtgcagagggtgtgatcagcctaggcctgtatggg
cccagtcttcataacctggagataaaaattcccccagagcagaggtttgtggacctgtta
cataagaagggcttggaggataaatcagtgccaagtcagagccacagtgaggaggaagag
gaggaggaggaggagagatctgaaatggcagcagatgctctagaaggattgagggtcacc
ccaaacgccaggattgatggggatcccaaagctaatatgccagcagaggaggaacctggt
tttagccttcccacttcccaaataaattgcctcggaatgaatggtgaggcagaggcttca
ggacagggggcatcgcaatgtaacagtggggaaggggatggggagcccgaccacgacagc
cctgcagagcactccccccaatctcccaggccagctgcaacccctcagccggagctccca
aaggctgtgcccaccagcaggggaagggagtgctgggaagctggctcagctgcacagatg
ggtggcaatgtggcttggcacctggaagggcacaagctgcagctggaagatgacgagtgt
gagaacaaagatgaggaagagaaggagtgcaccagccagagccaagattgtccagagaag
tacatggcagagaagagcaagagcttgccctgtgcccagcctacagatgtggaagagctg
caggacatccgggcgcccaccatcgcccagctgctgcaggagaagacactctactccttc
tcggagtggcctaaggatcgagtgatcattaaccgcatagataacatctgtcatgctgtc
ttaaagggcaagtggccctcgtctaatcagcagtttgaaccacaaaccctgatgcccacg
ccagtgttagcaagcagcacaggcactcggagcagctttgctgagcctgaagtcccggct
cccagcttcagcaacggaatgttagttacacaggaaagcttcctggctcctcctgccttt
acaaaggatgaacgaaagcacaggcagccctatgagtttgagctggagagagacgccaaa
cctagaagcctcgaacagttagctgcatcgcacccccgtccgcctgtagtgctgaacggc
tggcgggactcagcagggaacctggccagagtgtctgaagggtccccaggaaacctctct
cctttccctctgaacagtaatctgcccaagttagggacggtgcactcccttcaggggtcc
ttgggcatggacttatccggcatcctccaggcagggctaatccatcctgtcacagggcag
attgtcaatggaagcctccgaagagatgatgctgccatgaggagacgacggggcagaagg
aaaaatgtggaagggatggatcttaccttcttaaaggagaggagtcttcaaaatgggctg
caggatgctcaggaagatcagacgcagcctgcacagagcagcccacacccagataggcca
gtcactgctacctcaactccacatacagtcacagctccaagcatccgggcagagaaagct
gttccaaacaagagtctcctggactggctgagacagcagacagactacacacttgacgtc
cctggcttcagcacaagtttttcagacaagcccaagcagaggaggcagcgttgcaaggac
cccagcaaactggacataaactcactcacgggagaggagcgggtgcctgtggtccataag
ggtacagggcggaggttagggggcgccatggcaccagcattgaaggagttgccaaggtgg
cttgatgcaaacttggagtatgctgttgcagcagactgggctgacattgttaagctttca
ggattccttccagaaaacaaattcaatcgtatccttactgagcctgtgctccgagacact
ggtccccgtcgaagagggaggaggccaagaagtgaactcattaaagcccctggtgttata
tcagattcttcttcaggaatgggaccattatttatgaatggacttattgctggaatggat
ctagtgggactccagaacatgaggaacatgcaaggcatccctttagctgggctggttggg
tttcctgctggatttgcagcagtgcctactggtgaggatgtcaaaagcaccctaaatatg
ttgcctatgatgctgccaggcatggctactgtaccgcagatgtttggtgttggaggactt
ctcagcccaccaatgacaactacttgtacttcaactgctccagcttcattaacaagcaca
actaaaagtggtacatcaaatacagaaaaagctacggaggacaaacaaagtagccaggat
gcgaaaaatgaacctctgtctgaagacaagcccggtcctacttcattttctgatcagaca
gaacctgcaataactaccagtagtcctgtagcttttaatccatttcttatcccagggatg
tcccctggactgatctatccatctatgtttctttcctctggtattggcatgccattgcct
ggcatacaacaaaccagacacactgaggcaacaactctagaaagccagaagcggaagaaa
aagaaagctaaagtggagcaaacaaacccagaatcagaaactatctctctgtctgaaaaa
gatgctgcaaacagtcccaactttacagagaaaaccctatctttgtcatcagagaaagag
catgctataccagcagaagaggagttaaaagtaattaacaataccaattag
DBGET
integrated database retrieval system
