Carettochelys insculpta (pitted-shelled turtle): 142022091
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Entry
142022091 CDS
T11194
Symbol
TAF4
Name
(RefSeq) transcription initiation factor TFIID subunit 4
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Pathway
ciz03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
142022091 (TAF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ciz03021
]
142022091 (TAF4)
03036 Chromosome and associated proteins [BR:
ciz03036
]
142022091 (TAF4)
Transcription machinery [BR:
ciz03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
142022091 (TAF4)
Coactivators
SAGA/TFTC/STAGA complex
142022091 (TAF4)
Chromosome and associated proteins [BR:
ciz03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
142022091 (TAF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
tRNA-synt_1c
Motif
Other DBs
NCBI-GeneID:
142022091
NCBI-ProteinID:
XP_074867688
LinkDB
All DBs
Position
17:10001467..10076009
Genome browser
AA seq
1106 aa
AA seq
DB search
MAAGSDLLDEVFLNTEVDEKVVSDLVGSLESQLAASGHHHQHHKAQEPLRAAGGLLGNHV
VSSSSSSSSPSPSPGGVVVGGNANVQTENSSSSSKMGLSAPEITKAGAGGVQGSVINHNT
RSQSSALDGATTTSTSTTTSAAAAGGGSETSAAPGTLSQGKSVVISTMATALSTRNGKIG
TTTVQTLNGSNVVMNSHHSGSAAFSGTPATANPAAAPAVAPLVNNGPGSVGKANTVNAVL
PSASNTVIQTSFLSTAVSSTSSPSPTVISSQPSPSIVGGGPTVALVRPPIHTAGPTVAAA
AAATQNGSNTVINSAISVGVGSFPAVAAVTVGSGVSLQTPLVNSQPGSSVPAAPTTQVIK
SESPKTIVHAVSQQQTLVASGQPSTTGGNMIIGQTMQAGLSNVAPNPGGIPPAAPGTPTG
MAKGTASTVAQSLPRTPTATTSGIRATLTPTVLAPRLPQAPQNPTNIQNFQLPPGMVLVR
SENGQLLMIPQQALAQMQAQAHAQSQTQNTMTPRPATPTSAPPVQISTVPAPGTPIIARQ
VTPTTIIKQVSQAQTTVQPTTTLQRPPVVQPQLVLSSTAQAAALGTATAVQTGTPQRTVQ
GATATSTAATETMENVKKCKNFLSTLIKLASSGKQSSETTANVKELVQNLLDGKIEAEDF
TSRLYRELNSSPQPYLVPFLKRSLPALRQLTPDSAAFIQQSQQQQPTTQATTALTAVMLS
SSVQRTAGKATATVTSTLQQPVISLTQPTQVGVGKQGQPTPLVIQQSQKAGALIRPPQVT
LTQTPMVALRQPHNRIMLTTPQQIQLNQLQTVPVVKPTVLPGHKALSTVSAQAAATQKNK
LKEPGGGSFRDDDDINDVASMAGVNLSEESARILATNSELVGTLTRSCKDETFLLPAALQ
RRILEIGKKHGITEIHPDVVSYVSHATQQRLQNLVEKVSETAQQKNISYKDDERYEQASD
VRAQLKFFEQLDQIEKQRKDEQEREILMRAAKSRSRQEDPEQLRLKQKAKEMQQQELAQM
RQRDANLTALAAIGPRKKRKVDSPGSGSGTEGSSTSTVVPGSSGVGTTRQFTRQRITRVN
LRDLIFCLENERETSHSLLLYKAFLK
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggctcggatctgctggatgaggttttcctgaacacggaggtggatgagaag
gtggtgagcgacctggtgggctccctggagtcccagctggcggcctccggccatcaccac
cagcaccacaaggcgcaggagccgctgagggccgctggggggctgctggggaaccatgtt
gtgagcagcagtagcagcagcagcagccctagccctagccctggaggagtagtagtagga
ggcaatgctaatgtccaaacagagaacagcagcagcagcagcaagatgggactcagtgcc
ccagagatcacaaaagcaggggctggaggagtgcaagggagcgttattaatcataacacc
aggtcccagagttcagctctggatggagccactacaaccagcaccagcaccacgacctca
gcagcagcagcaggaggaggatctgaaacgtctgctgctccagggaccctcagtcagggc
aagtcagtggttatcagtaccatggcaactgccttatccaccaggaatggcaaaattggg
accacaacggtgcaaactttgaatgggagtaatgtggtgatgaactctcaccattcagga
agtgctgctttctctgggactcctgcaactgctaatcctgctgctgcacctgctgttgcc
cctttagttaacaatggacctggatctgtggggaaagcaaatacagttaatgctgttttg
ccatcagcttctaacactgtcatccagacttctttcctcagcactgctgtgtcctccacc
tcatccccatcccccacagtaatctcttcgcaaccatcaccaagcattgtaggtgggggc
cctactgtagcactggtgaggccaccaattcacacagcaggacccacggttgctgcagct
gctgcagccacccagaatgggagtaatactgtgatcaattcagccatcagtgtgggtgta
gggagttttcctgctgttgctgcagtcactgtgggttctggagtttccctccaaacacca
cttgtgaacagccaacctggttccagtgtgccggcagcacccaccacacaggtcatcaaa
tcagagtctcctaaaactatagtgcatgcagtatcccagcaacagacactagttgctagt
ggccagcccagtactacagggggtaacatgataattgggcaaactatgcaagctgggctc
tccaatgtggctcccaatcccggtgggatacctcctgcagctccaggtacccctacagga
atggctaagggcactgccagtacagtggcacaaagtctgccaaggactccaacagcaact
acaagtggtatcagagcaactttgactcctacagttttggcaccacgtctgcctcaggca
cctcagaatccaactaatattcagaactttcagttaccaccaggcatggtccttgtgcgt
agtgaaaatggacagttactgatgatccctcaacaagctttggcacaaatgcaggcacag
gcacatgcccagtctcagacccaaaataccatgactcctcgtcctgcaacacctaccagt
gcaccaccagtacaaatctcaacagtgccggctcctggaacacctataattgcacggcag
gtgacaccaactactataatcaagcaggtgtctcaggctcagacaactgtccagcctaca
acaacgttacagcgtccacctgtagtgcagcctcagcttgttctgagtagtactgcacaa
gcagcagcattaggaacagcaacagcggtacagactggaactcctcagagaactgtgcaa
ggagcaacagcaacctccactgctgccacagaaactatggagaatgtgaagaaatgcaag
aattttctatccacgttaataaaactggcttcatctggaaaacagtcttcagagactaca
gctaatgtgaaagagctagtacaaaacttgttggatggaaaaattgaagcagaagacttt
accagtaggttgtacagagaacttaattcttcacctcaaccttaccttgtgcctttcctg
aagaggagtttaccagctttgagacagctaaccccggactcggcagcttttattcagcaa
agtcaacagcagcagcccacaacgcaagcaacaactgcgctgacagcagtgatgctgagc
agctcggttcagcgcacagcggggaaggccactgccactgtaacaagtactctccaacag
cctgtaattagtctaactcagcctacgcaagttggggttggtaaacaagggcagcctaca
ccactggttatccaacagtctcaaaaagcaggggcattgataaggcctccacaggtaaca
ttgacacaaacccctatggtagcattgcggcaaccacataatcgtattatgcttacaact
ccccaacaaattcaattgaaccaacttcagacagtacctgtggtaaaaccaacagtatta
cctggacacaaagctctgtccactgtttcagcacaagcagctgccactcaaaagaataaa
ttaaaggaacctgggggaggttctttcagggatgatgatgatattaatgatgttgcatca
atggctggagtcaacctatcagaagagagtgcacggatattggcaacaaattctgagtta
gtgggcacgttaacgaggtcttgtaaagacgaaactttcctgcttccagcagctttgcaa
agaaggatactagaaataggtaaaaaacatgggataacagaaatccatcctgatgtagtt
agttatgtatcacatgcaacacaacaaaggttacaaaaccttgtagaaaaagtatcagag
acagcccaacaaaagaatatttcttataaggatgatgaaagatatgagcaagcaagtgat
gttcgggcacagcttaagttctttgaacaacttgatcaaatagaaaaacagagaaaagat
gaacaagaaagggaaattttaatgcgcgcagcaaagtctcggtctagacaagaagaccca
gaacagcttaggttgaaacagaaggccaaggagatgcagcagcaagagctagcacaaatg
agacagagggatgccaacttaactgcattagctgctattggtcccaggaagaaaagaaaa
gtggattctccaggctctggatcagggacagaggggtccagtacaagtacggtggtccca
ggcagctctggagttggaacaaccagacagtttacgcggcaaaggataacgcgggtgaac
ctcagggacctcatattttgtttagaaaatgagcgagagacaagccattcactattgcta
tacaaagcattcctcaagtaa
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