Carettochelys insculpta (pitted-shelled turtle): 142022149
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Entry
142022149 CDS
T11194
Symbol
SAMHD1
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1 isoform X1
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Pathway
ciz03250
Viral life cycle - HIV-1
ciz04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
142022149 (SAMHD1)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
142022149 (SAMHD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ciz03400
]
142022149 (SAMHD1)
DNA repair and recombination proteins [BR:
ciz03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
142022149 (SAMHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_2
HD
SAM_1
SAM_Ste50p
HD_assoc_2
PDEase_I
Pdc1_Ge1
Motif
Other DBs
NCBI-GeneID:
142022149
NCBI-ProteinID:
XP_074867789
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All DBs
Position
17:complement(31415900..31470511)
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AA seq
632 aa
AA seq
DB search
MLRRLRRSGAAAGSVAKRRRPASPADGLRTPEKRLSAWGAPEVDGPPPPRRWATEQVCDF
LCRNGFSEPGLLRRFRENQITGAVLPYLTKSELKDLGVGPLDLRLKLLACLQKLEQNHAD
VMKVFNDPIHGHIDIHPLLVRIIDTPQFQRLRYIKQLGGTYYVFPGASHNRFEHSLGVGY
LAGCLVRALHERQPELEINQRDILCVQIAGLCHDLGHGPFSHMFDGRFIPLARPGLKWKH
ETASVQMFEHLITSNGLEKVMEDYGLVLKEDIDFIKEQIGGPLDTTPHRGLWPYRGRPEE
KSFLYEIVANKRNGIDVDKWDYFARDCHHLGIQNNFDYKRFLKFARVCEVKNKKHICTRD
KEVGNLYDMFHTRNCLHRRAYQHKVGNIIETMITDAFLKADPYIKVVGTGGKQYRISTAM
EDMEAYTKLTDNIFLEILYSSNKELAEAQEILRKIELRDLYKYLGETRTEPGKEITEEQY
DRLPADIVASRPKNAPLDVELKAEDFIVDVINMDYGMKEQNPIDKVRFYCKSDPSQAVKI
SKDQVSRLLPETFAEQLIRVYCKKKDEKSLDAATKYFIQWCMNMDFTKPQDGDVVAPELT
PMKPSWNDPDEDELQSLNDCREASKSRTRLFQ
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgctgaggcggctgcggcggagcggggccgcggcgggcagcgtcgccaagcggcggcgg
cccgccagccccgccgatgggctccgcacccccgagaagcggctctccgcctggggcgcc
ccggaggttgacgggccgccgccgccgcggcgctgggccaccgagcaggtctgcgacttc
ctttgccgcaacggcttcagcgagcctggcctgttgcgccgcttccgagaaaatcaaatc
accggagcagtgttgccttacctcacgaaatctgaacttaaagacctgggagttggaccc
ttggacttgagactgaaattgcttgcctgtctgcaaaagctagaacaaaatcatgctgat
gtaatgaaggtttttaatgatcctattcatggccatattgacatacatcctctcctcgtt
cgaataattgatacgcctcagtttcagcgtctgcgatatattaaacagctgggaggtact
tactatgttttcccaggagcctcgcacaaccggtttgagcattccttgggggtaggttat
ctggcaggatgtctggttcgggcattacacgaaaggcagccagagttggaaataaaccag
cgagatattctctgtgttcagattgctggactttgtcatgatttgggtcatggaccattt
tctcacatgtttgatggaagatttattccacttgctcgcccagggctgaaatggaagcat
gaaactgcttctgttcagatgtttgaacatctgatcacttccaatgggctagaaaaagtc
atggaagattatggtcttgtcctgaaagaagatattgacttcatcaaagaacaaattgga
ggaccccttgatacaaccccacatcggggtttgtggccgtaccgtggtcgaccagaagag
aaaagcttcctttatgagatagtggctaacaaaagaaacggcatcgatgttgacaaatgg
gattattttgccagggactgccatcacttaggaatccagaataattttgattataaacgc
ttccttaaattcgctcgggtctgtgaagtgaaaaacaagaagcatatttgtacccgtgac
aaggaggtcggaaatctgtatgacatgttccatacacggaattgcttgcaccgcagagct
taccagcacaaggttgggaacatcattgaaacaatgattacagatgccttcctaaaagca
gatccttacattaaagtagtgggcactggaggaaagcaatacaggatttctacagcaatg
gaggatatggaagcttacactaagctaactgataacatcttcttggagattctgtactct
agtaataaagagctggctgaggcacaagaaattttacgtaaaatagagcttcgtgatcta
tacaagtatttgggagagactcggactgaaccaggaaaagaaattacagaggagcaatat
gacagactgccagctgacattgttgcttccaggccaaagaatgcacctctggatgttgag
ttgaaggctgaagactttatagttgatgtcatcaatatggactatggaatgaaagaacag
aaccctattgataaagttcgcttctattgcaagtctgacccgagccaggcagtcaagatt
tcaaaagaccaggtttcaaggcttctgccagaaacatttgcagagcagcttatccgggtt
tattgcaaaaaaaaggatgagaagagtttagatgctgcaacaaagtattttattcagtgg
tgtatgaacatggattttaccaaaccacaggatggtgatgtggtcgcccctgaactaact
ccaatgaaaccaagctggaatgaccctgacgaggatgaattgcaaagtttaaatgactgc
agggaagcttccaaatccagaactagactcttccaataa
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