Carettochelys insculpta (pitted-shelled turtle): 142022446
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Entry
142022446 CDS
T11194
Symbol
POLE
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Pathway
ciz03030
DNA replication
ciz03410
Base excision repair
ciz03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
142022446 (POLE)
03410 Base excision repair
142022446 (POLE)
03420 Nucleotide excision repair
142022446 (POLE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ciz03032
]
142022446 (POLE)
03400 DNA repair and recombination proteins [BR:
ciz03400
]
142022446 (POLE)
Enzymes [BR:
ciz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
142022446 (POLE)
DNA replication proteins [BR:
ciz03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
142022446 (POLE)
DNA repair and recombination proteins [BR:
ciz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
142022446 (POLE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf_DPOE_2
zf-DPOE
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
APP_N
Motif
Other DBs
NCBI-GeneID:
142022446
NCBI-ProteinID:
XP_074868382
LinkDB
All DBs
Position
18:47246..92525
Genome browser
AA seq
2271 aa
AA seq
DB search
MVLRNSGRRRAEPADGNPDTPRDEGPALSALKRLQRSQRTDRLDAQFGFERLKEPGERTG
WLINMHPTEVLDDDKRLVSCVDYYFIQEDGSRFKVALPYKPYFYIATRKGYEREVSSFLS
KKYQGKIANLETVAKEDLDLPNHLVGLKQNYIKLSFSTVDDLVKVRREISPAVKQNREKD
QGSETYTSMLSSALIGGSLTMDEEGPSKKTVNQMDNVVDMREYDVPYHVRLSIDLKIHVA
HWYNVRYRGSAYMPEITRRDDLVERPDPVVLAFDIETTKLPLKFPDAETDQIMMISYMID
GQGYLITNREIVSEDIEDFEFTPKPEYEGSFCIFNEPDEAHLIQRWFEHVQETKPTIMVT
YNGDFFDWPFVEARAAAHGMTMYEEIGFQKDSQGEYKASQCIHMDCLRWVKRDSYLPVGS
HNLKAAAKAKLGYDPVELDPEEMCRMATEEPQTLATYSVSDAVATYYMYMKYVHPFIFAL
CTIIPMEPDEVLRKGSGTLCEALLMVQAYHANIIFPNKQEQEFNKLTEDGHVLDSETYVG
GHVEALESGVFRSDIPCRFKMNPAAFNFLLQRVEKTLQHAIEEEEGLPLDQVTNFQEVCD
EIKVKLSCLKDIPNRIECPLIYHLDVGAMYPNIILTNRLQPSAIVDEATCAACDFNKPGA
NCQRRMTWQWRGEFMPASRSEYHRIQQQLESEKLPSLYPDGPPRAFHELSREEQAKYEKK
RLADYCRKAYKKLHVTKVEERITTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKLSA
ATEVGDAAEVKRCKNMEILYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCFTGAN
IITQARELIEQIGRPLELDTDGIWCALPNSFPENFVIKSTNAKKPKVTISYPGAMLNALV
KEGFTNDQYQELVDPASLTYVTRSENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFNE
DGSLAELKGFEVKRRGELQLIKIFQSSVFEAFLKGTTLEEVYASVAKVADYWLDVLYSKA
ANMPDSELFELISENRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRFIIS
KKPEGSPVTERAIPLAIFQAELSVRKHYLRKWLKSPSLQDFNIRTILDWDYYIERLGNTI
QKIITIPAALQQVKNPVPRIRHPDWLHKKLLEKNDVYKQKKINELFTSEGKRQVTANQPP
ESTPCTQVADMEDFGAAKPPHLLFPISSKRKRIPVAGESQEISQNLELTQSWREILGPPP
PIGATKEERLAWLRYHKKKWELQARQRQVRRKKQRLEDGEMILSGGLIRDGPSKGLSSYL
RRTARSILDLPWQIVQVAETSQPGLFRLWAVIGSDLHCIRLSILRVFYVNQRVAKPEEGA
AYRKVTRVLPRSNLLYNLYEYSVPEDMYQEHINEINASLSAPDIEGVYETQVPLLLRALI
HLGCVCMVSRQLVRHLSGREAETFALEHLEMRSLAQFSYLEPGSIRHIYLYHNSQGSKAL
FGLFIPSQRKASVFVLDTVRSNQMPNLANLYSAERSAMLEKTGEELLPPKKHSFEVRAET
DLKTVSRAIQRLLLGYKDERRGPTLIAVQSNWDVKQLASGIPIFEEFPLVPVRVTDDISY
AVLDWQRHAARRMIRHYLNLDMCLSQAFEMSRYYHIPIGNLPDDISTFGSDIFFSRHLRR
HNHLLWLSPTARPDLGGKEADDNRLVMEFDDRASVEINNPGCYSTVCLELDIQSLPVNTI
LQSHHINDMEGASSMSISFDVIQQASLEDMVTGNQATNIPASYDETALCSNAFRILKSMV
VGWVKEITQYRNIYADNQVIHFYRWLQSPASLLHDPALHRTLHNMMKKLFLQLVAEFKRL
GSSVVYANFNRIILCTKKRHVEDAIAYVEYIISSIHSKELFHSLTISFSRCWEFLLWMDP
ANYGGIKGRVPSGEMDTSKRQAETEEGREEEEQGDGSMEDLLENNWNIMQYLPQAASCQN
YFLMIVSAYIVAVYHSMKEEMQRSDPGSTPVRRRASSQTSQESVGEAGTLPGVITFSQDY
VSNELTQSFFTITQKIQKKVTGSRHVTLPSDMFPALPGCYLPLNNPALEFINYVCKVLSL
DANITNQVNKLKRDLLRLVDVGEFSEEAQFRDPCRSYVLSEVICHNCNFCRDLDLCKDPG
PFQDSAMPPSWVCSNCQMEYDHSCIEMSLVEALQKKLMAFTLQDLVCMKCKGVKETHMPI
YCSCASNFTLMIPTKAFVEQINIFRSIAQHYSMSHLLETIEWLLQMNPLLQ
NT seq
6816 nt
NT seq
+upstream
nt +downstream
nt
atggtgctgaggaatagcgggcggcgccgcgctgagccggcggacgggaatcctgacact
ccccgggacgagggcccggcgctctccgcccttaagcggctgcagcgcagtcaacggaca
gaccgtctggacgctcagttcgggtttgagcggctcaaggagccgggtgagaggacgggc
tggctgatcaacatgcacccgaccgaggttctggatgatgataaacgcttggtcagctgt
gtagattactactttatccaggaggatgggagcaggtttaaggtggccctgccctataaa
ccatacttctatattgcaacccggaagggctatgagcgggaagtgtcctccttcctctcc
aagaagtaccaggggaaaattgcaaatctggaaacggttgccaaagaggatctggacttg
ccaaatcacctggtgggtctgaagcaaaattacatcaaactctccttcagcactgtggat
gacctggtgaaggtgcggagggaaatctctcctgctgtgaagcagaacagggagaaagac
caggggagcgaaacctacacatccatgctgtccagtgctctcatcggtggcagtctgact
atggatgaagaagggccatcaaagaagactgtcaaccagatggacaacgtagtggacatg
cgggagtatgatgtgccataccatgttcgtctgtccattgacctgaagatccatgtagct
cattggtacaatgtccgctaccggggcagtgcatacatgccagaaatcacccgccgagat
gacctcgtggagcgtcccgaccctgttgtgctagcctttgacattgaaaccactaagctc
cccctgaagttccctgatgcagagacggaccagattatgatgatctcctacatgattgac
ggccagggctacctgatcacaaacagggagatcgtctcagaggacattgaagattttgag
tttactcccaagccagagtatgagggttccttttgcatcttcaatgagcctgatgaagcc
catttaattcagaggtggtttgaacatgtccaggagacaaaaccgactatcatggtcact
tataatggggacttctttgactggccctttgtggaagcccgagcagcagcgcatggaatg
actatgtatgaagagattggattccagaaggacagccaaggagagtacaaagcctcccag
tgcatccacatggactgtctaaggtgggtgaagagagacagttacctcccagtgggaagc
cacaacctgaaagcagcagccaaagcaaagcttggatatgacccagtggagttggaccct
gaggagatgtgccggatggctacagaagagcctcagactctggccacttattcagtgtcc
gacgctgttgctacttactacatgtacatgaagtatgttcacccgttcatcttcgctctc
tgcaccatcatccccatggagcctgacgaggtgctacggaaaggctcagggacactgtgt
gaggcactgcttatggtccaggcctatcatgccaacatcatcttccccaacaagcaggag
caggaattcaacaagctcacagaggatgggcacgtgctagactcggagacctacgtgggg
ggccacgtagaggcactggagtcaggggtcttccgtagtgacattccctgccgctttaaa
atgaatccagctgccttcaactttctgctgcagcgtgtggagaagaccctccaacatgcc
atcgaggaagaggagggcttgccattggatcaagtcaccaacttccaggaggtgtgtgat
gaaatcaaagttaagctatcctgcctgaaggacattccaaaccggattgagtgtcccctg
atctaccatctggatgtaggggccatgtatcccaacatcatacttacaaacaggctgcag
ccctcagcaatagtggacgaggccacgtgtgctgcctgtgactttaacaagccaggtgct
aattgccagcgccggatgacctggcagtggagaggggaattcatgcctgcgagccgcagt
gagtaccaccgcattcagcagcagctggagtcagagaaattgccctcgctctatccggat
ggaccacctcgggcatttcatgagctttcccgtgaggagcaggccaaatatgagaagaag
cgactggcagattattgccgcaaggcgtataagaagttgcatgtcaccaaggtggaggag
cgcatcaccaccatctgccagcgggagaactccttttacgtggacaccgtgcgagccttc
cgagaccgtcgctatgagttcaagggactacacaaggtgtggaagaagaagctgtctgcc
gctacagaggtgggagatgctgctgaagtgaagcgctgcaagaacatggagattctgtac
gactccctgcagctggcgcacaagtgtatcctcaactccttctatggctacgtcatgcgc
aaaggggcccgttggtactccatggagatggctggtattgtctgcttcactggcgcgaac
atcatcacccaggctagggagctgatcgagcagattgggaggccgctggagctggacaca
gatggaatctggtgtgcccttcccaacagcttcccagaaaactttgttatcaaatcaacc
aatgcaaagaagcccaaagtgacaatctcctatcctggtgccatgctgaacgctctggtg
aaggaaggctttacaaatgatcagtaccaggagctggtggacccagcttcactcacctat
gttacccgctcagagaacagcatcttctttgaagtggatggcccgtacctggccatgatc
ctcccagcctctaaggaggaaggcaagaagctgaagaaaagatatgctgtgttcaatgag
gatgggtccctggctgagctgaaagggtttgaagtgaagcggcggggtgagctgcagctg
attaagatcttccagtcatccgtgtttgaggccttcctgaagggcaccacgttggaggag
gtctatgcctctgtggccaaggtggcagactactggcttgatgtgctttacagcaaggct
gccaacatgccagactctgagttgtttgagctgatttccgagaaccgctccatgtctcgc
aagttggaggattatggggagcagaagtccacttccatcagcacagctaagcgcctggct
gagttcctgggggatcagatggtgaaagatgctgggctgagctgtcgattcatcatctcc
aaaaaaccagaagggtcaccagtcactgagagggccatcccactggccatcttccaagcc
gagctcagtgtgcggaagcactacctccggaaatggctgaagagcccatccctgcaggac
ttcaacattcgcacgatcctggactgggactactatattgagagactgggcaacaccatc
cagaagatcatcaccatccctgcagcactgcagcaggtgaagaaccccgtgccccggata
cgacatcccgactggctgcacaagaagctcctggagaagaatgatgtgtacaagcagaag
aaaatcaacgagctcttcactagtgaaggcaagagacaggtcaccgccaaccagccccca
gagagcacgccctgcacgcaggttgctgacatggaggattttggtgctgccaagccccca
catctgttgtttcccatctccagtaagcgcaagcggatcccagtagcaggggagagccag
gagatctctcagaacctggagttgacccagtcctggcgggagatcctaggccccccgcca
cccattggcgctaccaaggaggagcgcctggcctggctccgctaccacaagaagaaatgg
gagctgcaggcacggcagcgccaggtgcgccgaaagaagcagcggctggaggatggcgag
atgattctgagtgggggcctgatccgggatgggccctccaaggggctcagtagctacctg
cgcaggacggcgcgcagcatcctagacctgccctggcaaattgtgcaggttgctgagacc
agccagccaggcctgttcaggctatgggctgtcatcgggagtgacctgcactgcatcagg
ctgagcatcctgcgggtcttctatgtcaaccagcgggttgccaagccagaggagggagct
gcctaccggaaggtgactagggtcctgccccgctcgaacctgctctacaacctgtatgag
tactctgtccctgaggacatgtatcaagagcacatcaatgagatcaatgccagcctgtcc
gccccggacatcgaaggagtgtacgagactcaggtgccattactgttgcgtgccttgatc
catctgggttgcgtgtgcatggtcagcaggcagctggtcaggcatctcagtggtcgggag
gctgaaacctttgctctggagcacctggagatgcgctcactggcccagttcagctacctt
gagccagggagcatccggcatatctacctctatcataactcccagggcagcaaggcgctc
tttggcctcttcatcccctcacagcggaaggcctctgtcttcgtgctggacacggtgcgc
agtaaccaaatgccaaacctggccaacctgtactcagcagagcgcagcgccatgctggag
aagacaggtgaggagctgctccctcccaagaagcactcctttgaggtgcgagctgagact
gacctcaaaacagtttccagggccatccagcgtctgctactgggttacaaggatgagcga
aggggtcccacactgattgctgtccagtccaactgggatgtgaagcagctggcgagtggg
attcccatcttcgaagagttccccttggttcccgtacgggtcactgatgacatcagttat
gctgtcctggactggcagcgccatgctgcccgccgcatgatccgccactacctcaacctg
gacatgtgcctgtcacaggccttcgagatgagcagatactatcacatccccattgggaat
ctccctgatgacatctccacctttggctctgacatcttcttctcccgccacctgcgccgc
cacaaccatctgctgtggctctcgcccaccgcccggccagaccttggaggcaaggaggct
gatgacaaccgcctggtcatggagtttgacgacagagcctcagtggagatcaacaaccca
ggctgctactccactgtgtgcctggagctggacatccagagcctgccggtgaacaccatc
ctgcagtcccatcacatcaatgacatggaaggagcctccagcatgagcatcagcttcgat
gtgatccagcaggcatctctcgaggacatggttacagggaaccaggccaccaacatccca
gccagctatgatgagactgccctctgctccaatgctttcaggatcctgaagagcatggtg
gtgggctgggtgaaggagatcacacagtaccgcaacatctatgccgacaatcaggtgatc
cacttctaccgctggctccagtcaccggcctcgctgctgcacgacccggcgctacaccgc
acattgcacaacatgatgaagaagctcttcctgcagctggtggctgagttcaagcgtctt
ggctcttcagtggtttatgccaacttcaaccgcatcatcctctgcaccaagaagaggcat
gttgaggacgccattgcctatgtggagtacatcatcagcagcattcactctaaggagcta
ttccattccttgaccatttccttctctcgctgctgggagttcctgctctggatggacccg
gctaactatggaggcattaagggcagagtgccctctggggagatggacaccagtaaaagg
caagcagagactgaggaaggcagagaggaggaagagcagggggacggcagcatggaggac
ttactggagaacaactggaacatcatgcaatacctgcctcaggcagcctcctgccagaac
tacttcctcatgattgtgtcggcctacattgttgctgtataccacagcatgaaggaggag
atgcagcgcagcgatcctgggagcacccccgtcaggaggagagccagcagccagacctcc
caggagtctgtgggcgaggcaggcaccttgcctggggtcatcaccttctcacaggactat
gtctctaatgagctcacgcagagcttctttaccatcacccagaagatccagaagaaggtg
actggctcccgccatgtcacactgccctcagacatgttcccagctctgcctggctgctac
ctgccactcaacaacccggcactggagtttatcaactacgtctgtaaggtgctttcgctg
gatgccaacataaccaaccaggtgaacaagctgaagcgggacctgctgcgtctggtggat
gtaggcgagttctcagaagaggcccagttccgggatccctgccgctcatacgttctgtct
gaggtcatctgccacaactgcaacttctgcagggacctcgatctctgcaaagatcctggc
cccttccaggatagtgccatgccacccagctgggtgtgctccaactgccagatggagtac
gaccacagctgcatcgaaatgtccctggtggaggccctgcagaagaaactgatggccttc
acactgcaggacctggtgtgcatgaagtgcaaaggcgtgaaggagacacacatgcccatc
tactgcagctgtgccagcaacttcaccctgatgattccaaccaaggcctttgtggagcag
atcaacatcttccgcagcattgcccagcactacagcatgtcccacctgctagagaccatc
gaatggctgctgcagatgaaccccctgctccagtga
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integrated database retrieval system
