Carettochelys insculpta (pitted-shelled turtle): 142022568
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Entry
142022568 CDS
T11194
Symbol
SBNO1
Name
(RefSeq) protein strawberry notch homolog 1 isoform X1
KO
K26273
protein strawberry notch
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ciz03036
]
142022568 (SBNO1)
Chromosome and associated proteins [BR:
ciz03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
142022568 (SBNO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
SBNO
ResIII
Helicase_C
Motif
Other DBs
NCBI-GeneID:
142022568
NCBI-ProteinID:
XP_074868654
LinkDB
All DBs
Position
18:24688197..24733281
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AA seq
1391 aa
AA seq
DB search
MMEPGQDLLLAALSESGISPNDLFDIDPMDMGLATPAPVPAVQQSVPLSALELGLETEAT
VAVKQEPETVSTPALLNVRQPPSTTTFVLNQINQLPTLGTTIVMTKTTPVTTTRQTITVA
KIIQTSTTTRPSVAAPAVRNALTTTPSKDQVQLKDLLKNNSLNELMKLKPPPNIAQPVAT
AATDLSNGAVKKEASTKEVARIWINDVKMRSYSPTMKVPVIKEEEEPEEEDEEEMGHAET
YAEYMPIKLKIGLRHPDPVVETSSLSSVTPPEVWYQTSISEESIDNGWLSALQLEAITYA
AQQHETFLPNGDRAGFLIGDGAGVGKGRTIAGIIYENYLLGRKRAVWFSVSNDLKYDAER
DLRDIGAKNILVHSLNKFKYGKISSKHNGSVKKGVIFATYSSLIGESQSGGKYKTRLKQL
LHWCGDDFDGVIVFDECHKAKNLCPVGSSKPTKTGLAVLELQNKLPKARVVYASATGASE
PRNMAYMNRLGIWGEGTPFREFSDFIQAVERRGVGAMEIVAMDMKLRGMYIARQLSFSGV
TFKIEEVLLSQNYIKMYNKSVKLWVNAREKFQQAADLIDAEQRMKKSMWGQFWSAHQRFF
KYLCIASKVKRVVQLAREEIKNGKCVVIGLQSTGEARTLEALEEGGGELNDFVSTAKGVF
QSLIEKHFPAPDRKKLFSLLGIDLTAQSNNNSPRDSPCKENKIKKRKGEEITRESKKARK
TSGLAGSSSDESESESDASDNEESDNESSKFLSSGDDDDFNPFRDESSEDDEDDPWLIRK
DHKKNKDKKKKKSIDPDSIQSALLASGLGSKRPSSFSSTAVTTASSTNASANSNANSSFV
TSQDAVERAQQMKKELLDKLEKLAEDLPPNTLDELIDELGGPENVAEMTGRKGRVVSNDD
GSISYESRSELDVPVEILNITEKQRFMDGDKNIAIISEAASSGISLQADRRAKNQRRRVH
MTLELPWSADRAIQQFGRTHRSNQVTAPEYVFLISELAGEQRFASIVAKRLESLGALTHG
DRRATETRDLSRFNFDNKYGRNALEIVMKSIVNLDSPMVSPPADYPGEFFKDVRQGLIGV
GLINVEDRSGILTLDKDYNNIGKFLNRILGMEVHQQNALFQYFSDTLNAVIQNAKKNGRY
DMGILDLGSGDEKVRKADTKKFLTPGYSTSGHVELYTISVERGMSWEEATKIWAEQTGPD
DGFYLSSQIRNNKKTAILVKEVNPKKKLFLVYRPNTGKQLKLETYADLKKKYKKVPSEDA
LPHWLEQYNSSADTCTHAYWRGNCKKASLGLVCEVGLRCRTYFVLCGSVLSVWTKVEGVL
ASVSGTNVKMQIVRLRAEDGQRIVGLLIPANCVSPLVNLLSTSDQSQQLAVQQQQIWQQH
HPQSITNFNNA
NT seq
4176 nt
NT seq
+upstream
nt +downstream
nt
atgatggagccgggacaagatctgttgcttgctgctttgagtgagagtggaatcagtcca
aatgatctatttgatattgatcctatggacatgggtcttgcaaccccagcaccggtgcca
gctgttcagcagtcagtgccacttagtgcattagaactaggcttggagactgaggcaaca
gttgctgttaaacaagaaccagagactgtatctactccagcactattaaatgtcaggcaa
cctccatcaaccaccacctttgtgctgaatcaaataaatcagcttccaactttggggact
acaatagtaatgacaaaaaccacacctgtgacaactaccaggcagaccatcaccgtagca
aaaataattcaaaccagcacaacaactcgaccatcagttgcagcaccagcagtacgcaat
gccttgactactacaccttcaaaggaccaggtccagctgaaagatttgctcaaaaataat
agtcttaatgaactaatgaaattgaagccacctcctaacattgcgcagccagttgcaaca
gcagctactgatttaagcaatggtgcagtaaagaaggaggcttctacaaaagaagtagca
agaatatggataaatgatgtaaaaatgagaagttattcacctactatgaaagtgccagta
ataaaagaggaggaggaacctgaggaggaagatgaagaagaaatgggtcatgcagagaca
tatgcagagtatatgccaataaaattaaaaattggtctacgtcatcctgatccagtagta
gaaactagttcattatccagtgtaacccctccagaagtatggtatcaaacctcaatatct
gaagaaagtattgataatggctggttgtcggcattgcagcttgaagcaattacttatgca
gcccagcaacatgaaacattcctacctaatggagacagagctggattcttgataggtgat
ggtgctggtgtgggaaaaggaaggaccatagctggaataatctatgaaaattacttactg
ggaagaaaaagggctgtatggttcagtgtttcaaatgatctgaaatatgatgctgaaaga
gacttgagggacattggagcaaaaaatattttggttcattcattaaacaagttcaaatat
ggtaaaatttcttcaaaacataatggaagcgtaaagaaaggggtcatttttgccacgtac
tcttcccttattggtgaaagtcagtctggtggtaaatacaaaaccaggttaaagcagctt
ctccactggtgtggtgatgactttgatggagttatagtatttgatgaatgtcacaaagct
aagaatctgtgtcctgtgggttcttcaaaaccaacaaagacaggcttagctgtattggag
cttcagaataaacttccaaaggctagagttgtttacgctagtgccacaggtgcatctgag
ccacgaaatatggcatacatgaaccgtctgggaatatggggtgaaggaaccccatttagg
gaattcagtgactttattcaggctgttgaaagaagaggtgtgggtgccatggagatagtt
gctatggatatgaaactgagaggcatgtacatagcaagacagttaagcttttcaggtgtg
accttcaaaattgaagaagttctgctttcacaaaactacattaaaatgtataataaatct
gtgaaactgtgggtgaatgccagagagaaatttcaacaagcagctgatcttattgatgca
gagcaacgcatgaaaaagtcaatgtggggtcagttttggtcagcccaccagaggtttttc
aagtacctttgcatagcatccaaagtcaaaagggtggtacagctcgctcgagaagaaatc
aagaatggaaaatgtgttgttattggactacagtccacaggagaagcaagaaccttagag
gccttagaggagggtggtggagaactgaatgactttgtttccacagcaaaaggagtattt
cagtctctcattgagaagcacttcccagctcctgacaggaagaagcttttcagtttgctg
ggaatagatctgactgctcaaagtaataataattcacctagggacagtccttgcaaggag
aacaaaataaagaaacggaaaggtgaggaaataaccagagaaagcaagaaagctcgtaaa
acaagtggccttgctgggagcagctctgatgagagtgaaagtgagtctgatgcctcagac
aatgaagaaagtgacaatgagagctccaagtttttgagttctggagatgatgatgacttc
aacccgtttagagatgaatccagtgaggatgatgaagatgatccctggttaattagaaaa
gaccataagaaaaataaagacaagaaaaagaagaaaagtatagacccagattccattcag
agtgccttattagcttccggtcttggatcaaaacgacctagcagtttttcttccactgct
gttaccactgcttctagtaccaatgcgtcagctaacagtaatgctaacagcagctttgta
acaagtcaagatgctgtagaaagagcgcagcagatgaaaaaagaattgcttgataaactg
gaaaaactagctgaagaccttcctcctaacacattggacgaacttatagatgaacttggt
ggtcctgagaatgtggctgaaatgacaggtcgcaaggggagagttgtaagcaatgatgac
ggcagcatatcttatgaatcgaggtcggaacttgatgtgcctgttgaaattctaaatatc
acagaaaagcaaagatttatggatggagacaagaacattgccatcatctcagaagctgcc
agctcaggtatttcattacaagctgaccgtagagctaaaaatcagaggcggagagtgcac
atgactttggagttaccatggagtgcagatagagcgattcaacagtttggaagaacacac
agatcaaaccaagttactgcaccagaatatgtgtttctaatttccgaattggcaggagag
caaagatttgcatcgatagttgccaaaagactagagagcttgggtgcgctcactcatggt
gacagaagagcaacagaaactcgtgaccttagcaggttcaacttcgacaacaagtatggc
agaaatgctttggagatagttatgaagtccattgtaaatttagattccccaatggtgtcc
cccccagctgactatcctggagaattttttaaagatgttcgtcaaggattaataggtgtg
ggcctaataaatgtagaagaccgatcaggaattctgacacttgataaagattacaacaat
ataggaaaattcctgaatagaattctaggtatggaggtgcatcagcagaatgctttattc
cagtatttctctgatacgttaaatgcagttatacaaaatgctaaaaagaatggaagatat
gacatgggtattttggatctgggttctggggatgagaaggtcagaaaggcagacactaag
aagttcttaactccaggatactctacctctggacacgtagaattatacacaatcagtgta
gaaagaggaatgtcttgggaagaagcaactaagatttgggctgagcagactggaccagat
gatggtttttatttatcttcacaaataagaaataataagaaaactgccatcttggtaaag
gaagtgaatcccaaaaagaagcttttcttagtatacagaccaaacactgggaaacaactc
aaactggaaacttacgcagacctgaaaaagaaatataagaaggtaccttctgaagatgct
ctaccacattggctagagcagtacaattcatcggcagatacctgtacccatgcgtattgg
agaggcaattgtaagaaagcaagccttggattagtttgtgaagtgggcctccgttgtcga
acttacttcgtcttgtgtggctcagtgctaagtgtctggacaaaagtagaaggagtctta
gcctctgtgagtggtacaaatgtgaaaatgcaaatagttcggctaagagcagaggatgga
cagagaattgtaggtttgctcattcctgcaaattgcgtatcgccccttgtaaacctcctg
tcaacatcagaccagtctcaacagcttgcagtacaacagcagcagatatggcagcagcat
cacccacagagtatcaccaacttcaacaatgcataa
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