Carettochelys insculpta (pitted-shelled turtle): 142022776
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Entry
142022776 CDS
T11194
Symbol
HNF1A
Name
(RefSeq) hepatocyte nuclear factor 1-alpha
KO
K08036
transcription factor 1, hepatocyte nuclear factor 1-alpha
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ciz03000
]
142022776 (HNF1A)
Transcription factors [BR:
ciz03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
142022776 (HNF1A)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HNF-1B_C
HNF-1_N
HNF-1A_C
Homeodomain
Telethonin
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
142022776
NCBI-ProteinID:
XP_074869075
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Position
18:complement(4369358..4389891)
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AA seq
634 aa
AA seq
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MVSKLSHLQVELLGALLESGLTKETLIKALGEVDPYTLQSESQRAISAIQAEKGEPRAEI
PNLSNGMEEPRISEEETSDDGEEFTPPIMKELENLSPEEAAHQKAVVERLLQEDPWRVAK
MVKSYLQQHNIPQREVVDTTGLNQSHLSQHLNKGTPMKTQKRAALYTWYVRKQREVAQQF
THAGQGLMAEESMGDDLPTKKGRRNRFKWGPASQQILFQAYERQKNPSKEEREALVEECN
RAECIQRGVSPSQAQGLGSNLVTEVRVYNWFANRRKEEAFRHKLAMDTYSGPQPSSAPPL
PSHNSSSLQPPPAISPSKVHGMRYNQQPASEAESSSSNHHGNNSMVTTQTILQQVSSPGL
EPSQNLLSTDTKLISAHGGPLPPVSTLTALHSLEQNPQTLSQQTQNLIMASLPGVMAIGA
GETSSLTPAFTNTGASTLVIGLTSTQAQSVPVINSMGSSLTTLQPVQFSQQLHPSYQQPI
MQQVQSHINQNPFMATMAQIQSPHALYSHKSEVAQYAHTGLLPQTMVITDTANLSALTNL
TPIKQVFTSESETHTESGIHTSVSQTPTIHLQNQDTAIQHLQPSHRLTPSPAVSSSSLVL
YQSSDSTNSHGHLLPSTHSVIETFIPTQMASSTQ
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atggtctctaagctgagtcatcttcaggtggaactgctaggagcactgctggagtcgggg
ctaaccaaggaaaccctgataaaagcgctcggtgaagtggacccctacaccctccagagt
gaaagccagcgtgccatcagtgccattcaggcagagaaaggggaaccccgtgctgaaatt
cccaatctatccaatgggatggaggaacccagaatatccgaggaggagacctctgacgat
ggggaggaattcacccctccaataatgaaggagctggaaaatctgagtccggaggaggct
gctcatcagaaggctgtggtggagagactattacaagaagatccctggagagtagcaaag
atggtgaaatcctacctccagcagcacaacatccctcaaagggaggtggtagacaccaca
ggtttgaatcaatctcacctgtcacagcacctcaacaaaggaacacctatgaagacacag
aagagagcagctctctacacctggtatgttcgcaagcagcgagaggtggctcagcagttc
acgcatgctggtcagggactcatggcagaggagtccatgggagatgatctgcccactaag
aaagggagaagaaaccgctttaagtggggtcctgcctcacagcagatcctattccaagct
tacgagagacagaagaacccaagcaaggaggagagagaggcattggtggaggagtgcaac
agggcagaatgcattcagcgtggtgtctccccttcccaggcccaaggtctgggctcaaac
ctggtcactgaggtgagagtttacaactggttcgccaaccgtaggaaggaagaggccttt
cggcacaaactagccatggatacctacagcgggccacagcccagctcagctcccccactg
ccctctcacaactcttcctcccttcaaccaccacctgctatctcacccagcaaagtccat
ggcatgaggtacaaccagcagccagccagtgaggcagagtcttccagcagcaatcatcat
gggaacaactccatggtgaccactcaaacaattcttcagcaggtttcttctcctggactg
gagccaagccagaatttattgagtacagacactaagctgatctctgctcatgggggacct
ctccctcctgtcagcaccctgactgctttgcacagcctagagcaaaatccacagacattg
agccagcaaactcagaatttaatcatggcatcattgcctggagttatggcaattggagct
ggtgagacctcatccctcacaccggcattcaccaacacaggggcctccacgttggtaata
ggcctaacctccacccaagcccagagtgttcctgtgataaacagcatgggaagcagcctt
actacacttcagcctgtccagttctcccagcagctccacccatcttaccagcagcccatc
atgcagcaggtccagagccacatcaatcagaaccccttcatggccaccatggcccagata
cagagcccccatgctctctacagccacaagtctgaagttgcccaatatgcacatactggc
cttttaccccagaccatggtcataactgatacagccaatctcagtgccctgactaacctg
acaccaatcaaacaggtgtttacatctgaatcagagacccatacagagtccgggatccat
acatcagtatcacagacgccaacaatacatttacaaaaccaagacacagccattcagcac
cttcagccaagccatcgcctcaccccaagcccagctgtctcctctagcagcttggtactc
taccagagctctgactccaccaacagccacggccacttgctgccatccactcacagcgtt
attgagaccttcatccctacacagatggcatcctccacacagtaa
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