Carettochelys insculpta (pitted-shelled turtle): 142022928
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Entry
142022928 CDS
T11194
Name
(RefSeq) transient receptor potential cation channel subfamily V member 2-like isoform X1
KO
K04971
transient receptor potential cation channel subfamily V member 2
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Pathway
ciz04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
142022928
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ciz04040
]
142022928
Ion channels [BR:
ciz04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
142022928
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GFIT
Motif
Pfam:
Ank_2
Ank
Ank_5
Ank_3
Ank_4
Ion_trans
DSBA
DUF3562
Motif
Other DBs
NCBI-GeneID:
142022928
NCBI-ProteinID:
XP_074869365
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Position
19:3978478..4044048
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AA seq
769 aa
AA seq
DB search
MDNSNAMYGKPRLSQNRLIGLLETDDSIKEGTPAAGKQGESKGANGKKEEPQPLETSYGK
ESSDFPSMIKVNLNYRPGLSSKSQKDSNYFDRDRLFGAVSRGNPDELDGLLDYLSRTSKF
LSNSEYTDAKTGKTCLMKALLNLKNGRNTTIPLLLEIDQKTENRKPLVNAACTDSYYAGQ
TALHIAIEKRQLDLVKLLVENGANVHAKAHGEFFQKKKEGVCFYFGELPLSLAACTNQLD
VVKYLLDNPFQKARLQEQDSLGNTVLHALVTIADDTEQNTELVSKMYDEILKASTKINLT
EKLEEIVNEDGLTPLKLAAKMGKVEIFRHILQREIKDPEYRHLSRKFTEWTYGPVHISLY
DLSSVDSYEKNSVLEILAESSDTPNRYKMVVLEPLNKLLQHKWDSFAARRFYFSFFCYFM
FMVIFTVVAYHRPLQLQAPFPAELTAISFLQIIVFLGGFYLTVVQILYFVRRWRNLKNIF
SDGCIEIFLLLQAVSLLVSAVLYIMLSEDYVPTMVFSLLLGWVNMLYYTRGFQWTGIYCV
MIQKTILRDLLRFLMVYVIFLFGFAAALVTLTGDAPMASQNKSVTQEDDDKGLVSYSGLL
STSLELFKFTIGMGELEFQERMKFKYFVILLLLLFVILTYILLLNMLIALMSETVTNVSG
YSKSVWKLQRAIAILEIEKFWLWCLRRKQRSGCFLSVSLDDKKDERWCFRVEEIDWANWE
KELGVIKEDPGDSRGWETAPLEKRVRHWISQAQARSAPSEEQLPLHPIS
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atggataactcaaatgctatgtatgggaagccacgcctgtcacagaacaggctgattggt
ttgttagagacagatgacagcatcaaagaaggtacacctgcagctggtaaacagggagaa
agtaagggggccaatggaaagaaggaagagccacaacccctggaaacttcttatgggaaa
gagagcagtgactttccttcaatgatcaaggttaatttgaattaccgaccaggactttcc
agcaaaagccaaaaggactcaaattacttcgatagagatcggctctttggtgcagtctca
aggggtaacccagacgagctggatggattgcttgattatttgagtaggacctccaaattt
ctctccaatagtgaatatacagatgccaagacaggaaagacttgcttaatgaaagccctg
ctgaatttaaaaaatgggagaaacaccactatccccctgttgttagaaatagaccagaag
actgagaaccgaaagccacttgttaatgctgcatgcactgatagttactatgcaggccag
acagcactccatatcgccatagagaagaggcaactagatttagtgaagcttctggtagag
aatggagccaatgtccatgccaaagcccatggtgaattcttccagaagaagaaagaaggg
gtgtgtttctattttggtgaacttcccctttccttggctgcttgcaccaaccagcttgat
gtggtaaaatacctccttgataaccccttccagaaagccaggctccaggaacaggattcc
ctgggcaacacagttcttcatgccctggtgacgattgcagatgacaccgagcagaacaca
gagctagtgagcaagatgtatgatgagatcttaaaggccagcacaaagattaacctgaca
gagaagctcgaggagatagtgaacgaggatgggttaacaccactgaaactggctgccaag
atgggaaaagtagagatcttcagacacattctccaaagagagatcaaggatccggagtac
cggcatctgtctcgcaagttcactgaatggacatatggacctgtccacatctctctctat
gacttgtcctctgtggatagttatgagaaaaattcagtgttggagatccttgctgagagc
agtgacacaccaaatcgatacaagatggtggttttggagccactgaacaaactacttcag
cataaatgggactcatttgcagccaggagattttacttcagttttttctgttattttatg
ttcatggtcatcttcacggttgttgcctaccaccgtcccctgcagttacaggctccattt
cctgcagagttaacagctatcagcttcctgcagatcattgttttcctgggaggcttttat
ctcacagttgttcagattctgtactttgtgaggagatggcggaacctgaagaacatcttc
tctgatggctgcatcgagatctttctcttgctccaagcagtctcactgctggtttcggct
gtgctgtacatcatgctttcagaagattatgtgccgacaatggtattctccttactgctg
ggatgggtgaacatgctgtactacactcggggcttccaatggactgggatctattgtgtc
atgatacagaagaccatcttgcgggatctgctgcgcttcctcatggtttatgtgatcttc
ctctttggctttgcagcagctctggtcaccctcacaggggatgcccccatggcttcccag
aataagtctgtcacccaagaggatgacgataaaggcctcgtgtcgtacagtgggctgctg
agcacctccctagagctcttcaaattcaccattggcatgggagagctggagttccaggag
cgtatgaaattcaaatactttgtcatactgctgctgctgctgtttgtgatcctgacctac
atcctcctgctcaacatgctgattgcactcatgagcgagacggtcaccaatgtctctggt
tacagcaagagcgtctggaagctgcagagagccattgccattctggaaatagagaagttt
tggctttggtgcctgagaaggaagcagagatctggctgcttcttgtctgtgagtcttgat
gataagaaagatgagagatggtgtttcagagtggaggagattgactgggccaactgggaa
aaggagctgggagtcatcaaggaggatcctggggactccagaggctgggaaacagcaccc
ctagagaagagagtacggcattggatatcgcaagcacaagcaagatcagcaccatcagaa
gagcagttgccattacaccccatcagctag
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