Carettochelys insculpta (pitted-shelled turtle): 142023217
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Entry
142023217 CDS
T11194
Symbol
DDX52
Name
(RefSeq) putative ATP-dependent RNA helicase DDX52 isoform X1
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ciz03009
]
142023217 (DDX52)
Enzymes [BR:
ciz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
142023217 (DDX52)
Ribosome biogenesis [BR:
ciz03009
]
Eukaryotic type
90S particles
Helicases
142023217 (DDX52)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
P-loop_SecA
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
142023217
NCBI-ProteinID:
XP_074870054
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Position
19:complement(9096825..9112332)
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AA seq
631 aa
AA seq
DB search
MDAYGLFRKLGAGARFDVKRFNEDARRFKVVKVKDAEFGSPESLDFFGSKDAKLPSLPEN
GLGTNGSRKSKIELRDSHVVGKANDSEEKINAGIARKRKQDLGNFEGKKRKRLNQDPVSV
NSGVENDGILWMSSLEIKSKDTREKREKKAIAEKLEQVRQQKINHFRNKHKISIQGSDLP
EPIATFEQLQAEYKIQPKIMQNIQAAGFRVPTPIQMQAIPVMLHSRELLASAPTGSGKTL
AFSIPILTHLKQPMNKGFRALIISPTRELASQTHRELVKLSEGTGFRIHMIHKASEAIKK
FGPNSSQKFDILVTTPNRLIYLLKQDPPVIDLTRVEWLVVDESDKLFEDGKTGFRDQLAS
IFLACTSHVVKRALFSATFAYDVEQWCKLNLDNVILVSVGARNSAAETVSQELLFVGSET
GKLLAMRDLVKKGFTPPVLVFVQSIDRAKELFHELIYEGINVDVIHADKTQLQRDNVVHS
FRAGKIWVLICTALLARGIDFKGVNMVINYDFPTSAVEYIHRIGRTGRAGHTGKAVTFFT
EDDKPLLRSVANVIQRAGCPVPEYIKAFHKLQSKQKKKLIKKPLEREHIRTTPQYLLQKT
KKKKKITQKNIKEKKLQKTKKDSQLHTAPES
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atggatgcctacgggctcttccggaagctgggggctggcgccaggttcgatgtgaagcgc
ttcaacgaggacgcccggcgcttcaaggtggtaaaagtgaaagacgccgagtttggttct
ccagagagtcttgacttttttggaagcaaagatgcgaagcttccaagccttcccgagaat
ggcttggggacgaatggctccaggaaatctaaaatagagctacgtgattcgcatgtggtt
gggaaagcaaatgactctgaagagaagataaatgcagggattgcaaggaaaagaaaacaa
gatctggggaacttcgagggaaagaaaaggaaaagactgaaccaagaccctgtttcagtc
aactctggtgtggaaaatgatgggatattgtggatgtcgtctttggaaataaagtctaaa
gatacaagagaaaagcgagaaaagaaagctattgcagagaaactagaacaagtcagacag
caaaagataaaccatttcagaaataaacacaagattagtatccaaggatcagatctccct
gaaccaattgccacatttgagcaacttcaagcagaatataaaatccagcctaaaataatg
cagaatattcaagctgctggcttccgggtccctacaccaattcagatgcaagccattcca
gtcatgcttcatagtcgggaacttctggcttcagctcccactggatcaggaaagactttg
gcttttagcattcctattttaacacatctgaaacaacctatgaataaaggatttagagct
ctgatcatttcacctacccgagagcttgctagtcagacccaccgagagctagtaaagctg
tctgaggggactggattcagaatacatatgatccataaagccagtgaagcaatcaagaag
tttgggcccaattcatctcagaaatttgatatactcgtaacgactccaaacagactcatt
tatttgttgaaacaagatcctccagttatagatttgacaagagttgaatggttggtagtt
gatgagtcagacaaactatttgaagatgggaagactgggttcagagaccagttagcctcc
atcttcctggcatgcacatctcatgttgtgaaaagagcgttattcagtgctaccttcgca
tatgatgtagagcagtggtgcaaactcaacctggacaatgtcattttggtgtctgtggga
gcacgaaactctgctgctgagacagtaagtcaagagctcttatttgttggctcagagaca
ggaaaactactggcaatgagagaccttgttaaaaagggtttcacgcctccagtccttgtt
tttgtgcagtccattgacagggcgaaagagctcttccatgagctcatttatgaagggatc
aacgtggatgtcatccatgcagacaaaactcagctacagagagataatgtagtacacagt
ttcagagctgggaagatttgggtgctcatctgcacagccttgctagcacgagggattgac
ttcaaaggtgtgaatatggtcattaactatgacttcccaaccagtgctgtggaatacatc
cataggataggtcgtactggaagagcgggacacacaggaaaagcagttactttttttact
gaagacgataaacctttattacgaagtgtagccaatgttattcagagggctggctgtcct
gtgccagagtatataaaagccttccacaaactccaaagcaaacaaaagaagaagctgatt
aagaaaccattggaaagagagcatattcgtaccactcctcagtacttactacaaaaaaca
aagaagaaaaagaaaattactcagaaaaatattaaagaaaagaaactccaaaagacaaaa
aaagactctcaattacacactgctccagaaagttga
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