Carettochelys insculpta (pitted-shelled turtle): 142023285
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Entry
142023285 CDS
T11194
Symbol
CLTC
Name
(RefSeq) clathrin heavy chain 1 isoform X1
KO
K04646
clathrin heavy chain
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Pathway
ciz04142
Lysosome
ciz04144
Endocytosis
ciz05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
142023285 (CLTC)
04142 Lysosome
142023285 (CLTC)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
142023285 (CLTC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ciz04131
]
142023285 (CLTC)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ciz04147
]
142023285 (CLTC)
Membrane trafficking [BR:
ciz04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
142023285 (CLTC)
Exosome [BR:
ciz04147
]
Exosomal proteins
Proteins found in most exosomes
142023285 (CLTC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_PEP5_VPS11
TPR_Vps41
TPR_1
Motif
Other DBs
NCBI-GeneID:
142023285
NCBI-ProteinID:
XP_074870180
LinkDB
All DBs
Position
19:6024645..6073705
Genome browser
AA seq
1682 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMNDPSN
PIRRPISADSAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVA
LVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGN
QPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDVETGTCIYMNRISG
ETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRMAVRNNLAGA
EELFARKFNALFAQGNYSEAAKVAANAPKGILRTPDTIRRFQSVQAQPGQTSPLLQYFGI
LLDQGQLNKYESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSVDPTLALSVYL
RANVPNKVIQCFAETGQVQKIVLYAKKVGYTPDWIFLLRNVMRISPDQGQQFAQMLVQDE
EPLADITQIVDVFMEYNLIQQCTAFLLDALKNNRPSEGPLQTRLLEMNLMHAPQVADAIL
GNQMFTHYDRAHIAQLCEKAGLLQRALEHFTDLYDIKRAVVHTHLLNPEWLVNYFGSLSV
EDSLECLRAMLSANIRQNLQICVQVASKYHEQLSTQSLIELFESFKSFEGLFYFLGSIVN
FSQDPDVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVIGGLLDVDCSEDVIKNLILVVRGQF
STDELVAEVEKRNRLKLLLPWLEARIHEGCEEPATHNALAKIYIDSNNNPERFLRENPYY
DSRVVGKYCEKRDPHLACVAYERGQCDLELINVCNENSLFKSLSRYLVRRKDPELWGSVL
LESNPYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFRKFDVNTS
AVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGMVKEAIDSYIKADDPSSYMEV
VQAANASGNWEELVKYLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQ
VGDRCYDEKMYDAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFAC
VDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMMN
HPTDAWKEGQFKDIITKVANVELYYKAIQFYLEFKPLLLNDLLMVLSPRLDHTRAVNFFS
KVKQLPLVKPYLRSVQNHNNKSVNESLNNLFIIEEDYQALRTSIDAYDNFDNISLAQRLE
KHELIEFRRIAAYLFKGNNRWKQSVELCKKDRLYKDAMQYASESKDTELAEELLQWFLQE
GKRECFGACLFTCYDLLRPDVVLETAWRHNIMDFAMPYFIQVMKEYLTKVDALKEKVDKL
DASESLRKEEEQATETQPIVYGQPQLMLTAGPSVAVPPQAPFGYGYTAPPYGQPQPGFGY
TM
NT seq
5049 nt
NT seq
+upstream
nt +downstream
nt
atggctcagattctgcccatccggttccaggagcatctccagctccagaatctggggatc
aatccagcgaacattggcttcagtactctgactatggagtcagataaattcatctgcata
agagagaaggtaggagaacaagcacaggtggtgatcattgacatgaatgaccccagcaat
cccattcgcagacctatttcagctgacagtgctatcatgaatcctgctagcaaagtcatt
gcattaaaagctgggaaaacacttcagatctttaacattgagatgaagagtaaaatgaag
gctcatactatgacggacgatgttactttctggaaatggatttcactgaacacagttgct
cttgtaactgacaatgctgtctaccactggagcatggagggagaatctcagcctgtgaaa
atgtttgatcggcactccagtcttgcaggctgccagatcatcaactatcgtacagatgct
aagcaaaaatggttacttctaactggcatatcagcacagcaaaatcgtgttgtgggagcc
atgcaactttattctgtagatagaaaagtgtctcagcctattgaggggcatgcagctagt
tttgcccagttcaagatggaaggcaatgctgaggaatcaactctcttctgttttgcagta
agaggtcaagctggaggcaagctacatatcattgaagttggcacaccaccaacagggaac
caaccatttcccaagaaggcagtggatgtattttttcctccagaagcacagaatgacttt
cctgtagcaatgcagattagtgaaaaacatgatgtggtgtttctgataacaaaatatggt
tacatccatttgtatgatgtcgaaactggcacctgcatctacatgaatagaatcagtgga
gaaacgatatttgtcactgcaccacatgaagcaacagctggaattataggggttaacaga
aagggacaagttctctctgtgtgtgtggaagaagagaatattattccttacatcactaat
gtgctgcaaaatcctgacctggctttgcgaatggctgtccgcaacaatctggcaggagca
gaggaactctttgcccgaaaattcaatgcactgtttgcccagggcaactactcagaggca
gcaaaagtggcagcaaatgcaccaaagggaatcctgcgtactccagataccatacgccgg
ttccagagtgttcaagctcagcctggtcagacttcacccttgctccagtactttggtatt
ctgttggaccaggggcagctaaacaaatacgaatccttggaactctgcaggccagtgctt
cagcagggacgcaaacagcttttggagaaatggttaaaagaggataagttggagtgttcg
gaggaattaggagatctagtgaagtctgtggaccctacattggcacttagtgtctatcta
agagctaatgttcctaacaaggtcattcagtgttttgctgaaacgggacaagtccagaag
attgttctgtatgctaagaaggttggctataccccagactggattttcctcctaaggaat
gtaatgcggatcagccctgaccagggacagcagtttgctcaaatgctcgttcaggatgaa
gaacctctggcagatatcacacaaatcgtggatgtttttatggagtacaacttaattcag
cagtgtactgccttcttgctggatgcactgaagaataaccgcccttctgaaggtcccctg
caaacacgtttgcttgagatgaacctcatgcatgcacctcaggttgcagatgctatcttg
ggaaaccagatgtttactcactatgaccgggctcacattgctcagctgtgtgaaaaagct
ggcctgttgcagagagcattggaacacttcaccgatttgtatgatatcaagcgtgcagta
gtccatactcatctcctcaaccctgagtggctggtgaattactttggctccttatcagta
gaagactctttggagtgtctacgtgccatgctttctgctaacattcgtcaaaacctgcag
atttgtgttcaggtagcctcaaaataccatgagcagctgtcaacgcagtcgcttatcgag
ctatttgagtcttttaagagctttgaaggtctgttttatttcttgggctctattgtaaac
ttcagccaggacccagatgtgcacttcaaatatatccaagctgcatgcaagacagggcaa
attaaagaagtggaaagaatctgcagagagagcaattgctatgatccagaacgtgttaaa
aacttccttaaggaagcaaaactgactgaccagttgccactaatcattgtatgtgatcgc
tttgactttgtccatgatcttgtgctgtacctgtatagaaataacctccagaagtatatt
gaaatttatgtacaaaaggtgaacccaagccgtctgcctgttgtcattggaggattgctt
gatgtggattgttctgaagatgtgataaaaaacttgatcctcgttgtaagaggccagttc
tccactgatgagcttgttgcagaagtagaaaaaagaaacaggctaaaattgctccttcct
tggttagaagcaagaattcatgagggctgtgaggagcctgctactcataatgcactggcc
aaaatatacatagacagcaacaacaacccagaaagatttctgcgtgagaacccctactat
gacagtcgtgttgttgggaagtattgtgagaagagagaccctcatttggcatgtgtggct
tatgagcgtgggcagtgtgacttggagcttattaatgtatgcaacgaaaactctctcttc
aagagcctctcacgttacttagttcgccgtaaagatcctgaattgtgggggagcgttctg
ctagaaagcaatccttacagaagaccacttattgaccaggttgtgcagactgcattgtct
gagacacaggaccctgaagaggtatctgttactgtaaaagctttcatgactgctgatctt
cccaatgagctcattgaactgctggagaaaatagttcttgacaactctgtgttcagtgaa
cacaggaacctgcaaaacctcctcattctcacagctattaaagctgaccgtactcgtgtc
atggaatatatcaaccgtctggataattatgatgctccagatatagcaaatattgctatc
agtaatgagctttttgaggaggcctttgccatcttcaggaaatttgatgtcaacacctca
gctgtgcaggtattgattgaacacattggaaatttggatcgggcatatgaatttgctgaa
cgttgcaatgaacctgctgtgtggagtcagcttgctaaagctcagcttcagaaagggatg
gtgaaggaagcaattgattcttacatcaaagcagatgatccttcttcctacatggaagtt
gttcaagctgccaatgctagtgggaactgggaagagctggtgaaatacctacagatggca
cgcaaaaaagcccgggagtcctatgtggagacagaactcatttttgctctcgctaaaacg
aatcgtctggctgagctggaagaatttatcaatgggcctaataatgctcacatacagcaa
gttggtgatcgctgctatgatgagaagatgtatgatgctgctaagctgttgtataacaac
gtgtctaacttcggccgtttggcatcaacattggttcatctaggcgaataccaagcggct
gttgatggtgctcggaaagcaaacagtactcgaacatggaaagaggtttgctttgcatgt
gtggatgggaaagagttccgcctagcccagatgtgtggacttcatattgtagtgcatgca
gatgaattggaagaactcatcaactattaccaggatcgcggatactttgaagagctgata
actatgctggaagcagcattgggactggagcgcgcccacatgggaatgtttacagagctg
gcaattctctattccaaattcaagcctcagaagatgagggagcacttggaactattctgg
tccagagttaacattcccaaggtgctaagagctgcagaacaagcccatctttgggcagag
ctggtgttcttgtatgataaatacgaagagtacgataatgccatcatcacaatgatgaat
cacccaacagatgcctggaaagaaggacaattcaaagatatcatcaccaaggtagccaat
gtggagctgtattataaagcaattcagttttatttggaatttaagcccttgttgctcaac
gatctgctgatggtgctgtctccccggctggatcatactcgtgctgtaaacttctttagt
aaggttaaacagcttccacttgttaaaccctacttgcgttcagttcaaaatcacaacaac
aaatcggtgaatgagtctttgaataatctcttcattatagaagaagactatcaggctctt
aggacctctatagatgcctatgacaactttgacaacatctcccttgctcagcgtttggag
aagcacgagctcattgagttcagaagaattgctgcttatctctttaaaggcaacaatcgc
tggaaacagagtgtagaactttgcaagaaagacagactatacaaggatgcaatgcaatac
gcctcagaatccaaagatacagagttagcggaagaattgctccagtggttcttgcaggaa
ggaaaaagagagtgttttggagcttgtctcttcacctgttatgaccttctaaggccagat
gttgtcttggaaactgcatggaggcataacatcatggactttgccatgccctactttatt
caggtcatgaaggagtacttgaccaaggttgatgcattaaaggaaaaggtggataaactg
gatgcctctgagtcgctgagaaaggaggaggaacaggctacagaaacacaacctattgtt
tatggtcaaccacagctaatgttgacagcaggacccagtgttgcagttcccccacaagca
ccttttggctatggctacaccgcacctccatatgggcaacctcagcctggtttcgggtac
accatgtaa
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integrated database retrieval system
