Carettochelys insculpta (pitted-shelled turtle): 142023329
Help
Entry
142023329 CDS
T11194
Symbol
ARID2
Name
(RefSeq) AT-rich interactive domain-containing protein 2
KO
K11765
AT-rich interactive domain-containing protein 2
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Pathway
ciz03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
142023329 (ARID2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ciz03000
]
142023329 (ARID2)
03021 Transcription machinery [BR:
ciz03021
]
142023329 (ARID2)
03036 Chromosome and associated proteins [BR:
ciz03036
]
142023329 (ARID2)
Transcription factors [BR:
ciz03000
]
Eukaryotic type
Helix-turn-helix
ARID
142023329 (ARID2)
Transcription machinery [BR:
ciz03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
142023329 (ARID2)
Chromosome and associated proteins [BR:
ciz03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
142023329 (ARID2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ARID
RFX_DNA_binding
TSTD2_N
DUF5532
Motif
Other DBs
NCBI-GeneID:
142023329
NCBI-ProteinID:
XP_074870240
LinkDB
All DBs
Position
1:complement(320884830..321091751)
Genome browser
AA seq
1831 aa
AA seq
DB search
MANSTGKTQPDQRRKGLAFLDELRQFHHSRGSPFKKIPVVGGKELDLHALYTRVTTLGGF
GKVSEKNQWGEIVEEFNFPRSCSNAAFALKQYYLRYLEKYEKVHHFGEDDDEVQPGNPKL
QLPIGAIPSSYNYQQHSVSDYLRQSYGLSMDFNSPNDYNKLVLSLLSGLPNEVDFAINVC
TLLSNESKHVMQLEKDPKIITLLLANAGVFDDTLGSFSTVFGDEWKEKTDRDFVKFWKDI
VEDNEVRDLISDRSKSQDVPSEDWIWESLFHPPRKLGINDIEGQRVLQIAVILRNLSFEE
GNVKLLAANRTCLRFLLLSAHSHFISLRQLGLDTLGNIAAELLLDPVDFKTTHLMFHTVT
KCLMSRDRFLKMRGMEILGNLCKAEDNGVLICEYVDQESYKEIICHLTLPDVLLVLSALE
VLYMLTEMGEVACTKIAKVEKSIDTLVCLVSMDIQMFGPEALTAVKLIEHQSTNHQLSEI
RPQVVEHVSSQTHATAVPASRAAPHVAPPPGIVEIDSEKFACQWLNAHFEVNSDCSVSRA
EMYSEYLSTCSKLARGGILTSTGFYKCLRTVFPNHTVKRVEDPNNSGQAHIHVVGVKRRA
IPLPIQMYYQQQPSSASPVVRVDSVSDVSPSPSPAGIPHGPQSVGNHFQRTPVNNQSSNM
TATQMSFPIQGVHTVAQTVSRIPQNPSVHTQQQQNATVTVIQNKTPISCEVVKATVIQSS
VSQPAVPVTIAVGGAAQASNQNHSNAGPQPSVAVVSSQTLLHHQPVIQQQSPLHAVVPGQ
IPSGTPVTVIQQAVPQGHIFGRVQNLPACTSAVSQGQQLITTSSQPLQTSSQQPSASNQQ
QDTVIIAPQQYVTTSASNIVSATTVQNFQVAAGQMVTIAGVQNPQTSRVGFQNIAPKPLP
SQQVPSAVVQQPMQQQQPPSQQSVVIVSQPAQQGQTYAPAIHQIVLTNPTSLPAGQTVQL
TGQPNITPSSSPSPGPVTNNQVPTVMSSPSTTPQSQGPPPTVSQMLSVKRQQQQQHSPAP
SQQQVQQVQQQQPVQMQVQPQQGNAGVGQPSSGESSLIKQLLLPKRGPSTPGGKLILPAP
QIPPPNNARAPSPQVVYQVANNQAPSFGVQGQSPAQQLLVGQQNVQLVQSAIQPQGAVQT
VPISNLQILPGQLISNSPATIFQGTSGNQVTITVVPNTSFATATVSQGNPTQLIAPAGIS
MSGTQTGVGLQVQTLPATQAPPAGQSPCVAAPPFKGDKIICQKEEEAKEATGLHVHERKI
EVMENPSCRRGASNTSNGDAKENEMQVGSLLNGRKYNDSSLPPSNSGKTQNEANQCSQVS
NGPSLELGENGAPGKQNFEQMDTQDIKSDLKKPLVNGVCDFDKGDGSHLSKNIPNHKTSN
HVGNGEISPVEQGNSDAMQQETAKGDQGERISNGPVLTLSSSTVVSGTQEAAKLLTQQHS
GTNTDLPNGPLASSLNSDVPQQRPSVVVSPQSTASVIQGHQIIAVPHSGPRVSQSTLSSE
VRSTNGTAECKTVKRPAEDNDRETVPGIPNKVGVRIVTISDPNNAGCSATMVAVPAGADP
STVAKVAIESAVQQKQQHPTTYIQSMVTQSTPVTPVQVQSQQMSLQQPSSYQAPSQHCEQ
VKKPGQNFMCLWQSCKKWFQTPSQVFYHAATEHGGKDVYPGQCLWEGCEPFQRQRFSFIT
HLQDKHCSRDALLAGLKQDEHGQTGNQKPSNKQPTAGGSASTPRAQKAIVNHPSAALMAL
RRGSRNLVFRDFTDEKEGPITKHIRLTAALILKNIGKYSECGRRLLKRHENHLSVLAISN
MEASSTLAKCLYELNFTVQSKEQEKDSEMLQ
NT seq
5496 nt
NT seq
+upstream
nt +downstream
nt
atggcaaattcgacgggtaaaacccaaccagaccagcggagaaagggactcgctttcctg
gacgagctgcggcagtttcaccacagcagagggtcgccttttaagaagatccctgtggtg
ggtgggaaggagctggatcttcacgctctctacaccagagtcaccactttaggcggattt
gggaaggtatctgagaagaatcagtggggagaaattgtagaggagtttaactttcccaga
agttgttctaatgctgccttcgctttaaaacagtattacttgcggtatctagaaaagtac
gagaaagtacatcattttggggaggatgatgatgaggtacaaccaggcaatccaaagcta
caacttcctataggtgcaattccatcttcctacaattaccagcaacacagtgtatcagat
tatcttcgtcaaagctatgggctgtctatggactttaattcgccaaatgactataataaa
ttggtgctttcactgttatctggactccccaatgaagttgactttgctattaatgtgtgc
actcttctatcaaatgaaagcaagcatgtcatgcagcttgaaaaggaccctaaaatcatc
actctgctgcttgctaatgctggggtattcgatgacactttaggatcattttctactgta
tttggagatgaatggaaggagaaaactgatagagattttgttaagttttggaaggacatt
gttgaggacaatgaagtacgtgacctcatttctgacagaagcaaatctcaagatgttcca
tcagaagattggatatgggagtctttatttcacccgcctcgcaagttgggcattaatgat
attgaagggcagcgggtacttcagatagcagtgattttgcgtaatctttcctttgaggaa
ggaaatgttaaacttttggcagctaatcgtacctgtcttcggttcctgctgctttctgct
catagtcattttatttctctaaggcaattgggacttgacacactgggaaatattgcagca
gagcttctgttggaccctgttgatttcaaaactactcatctaatgtttcacactgttaca
aaatgcctaatgtcaagggatagattcttaaaaatgagaggcatggaaattttggggaat
ctttgtaaagctgaagataacggtgtcttaatttgtgaatatgtggatcaagaatcctat
aaagagataatatgtcatctcactttaccagatgtgctgcttgtactttcagcactggaa
gtgctctatatgctcacagaaatgggagaggtggcctgcacaaagattgctaaagtagaa
aagagcatagatacattagtatgtctggtttctatggacatccagatgtttggacctgag
gcactcactgcagtaaaactcatagaacatcaaagcaccaaccaccaactatctgaaatc
aggccacaggtggtggagcatgtttcctcacagacccatgcaacagctgtcccagcatca
agagcagcaccacatgttgctccaccaccaggaatagtagaaatagacagtgagaaattt
gcatgccaatggttgaatgcacattttgaggtgaattcagattgctcagtctctcgagca
gaaatgtactcggaatacctctcaacctgcagtaaattagctcgaggtggaatcctaaca
tcaactggattttataaatgtcttcgaactgtctttccaaatcacacagtgaagagagta
gaggatccaaataacagtggacaggcacatatacatgtagtaggagttaaaaggagagct
ataccacttcccattcagatgtactatcagcaacaaccatcttctgctagccctgtcgtc
cgagttgactctgtttctgatgtatctccatctccttcaccagcaggaatcccccatgga
ccacaaagtgtaggaaaccattttcagaggactccagttaacaaccaatcttcaaatatg
acagcaacacagatgtcttttccaattcaaggtgtgcacacagtggcacagactgtttct
agaattccacagaatccttcagttcacacacaacagcaacaaaatgctacagtgactgtc
attcagaataaaactccaatttcctgcgaggtagtgaaggccacggtaatacagagctca
gtttcccaacctgcagttcctgttactattgctgtaggtggagcagcacaagcttctaat
caaaatcacagcaatgcaggtccacagccatctgttgctgttgtcagttctcagacattg
cttcaccaccaacctgtaattcaacaacaatctccgctacatgcagtggtaccaggacag
ataccttccggcactcctgttacggtaattcaacaagctgtacctcagggtcatatattt
ggcagagtacagaatctaccagcatgcacttcagcagtttcacagggtcaacagttaatc
actacatcttcacagcctttgcaaacttcttctcagcagccttctgctagtaatcagcag
caagacacagtcatcatagcaccccaacaatatgtcacaacctccgcatccaatattgtt
tctgccactacagtacagaatttccaagttgcagcagggcagatggttactatcgccggt
gtccagaatccacaaacttctagggttgggtttcagaatattgcaccaaagcctctacct
tctcagcaagtcccgtctgctgtggtacaacagcccatgcagcagcagcagccaccatcc
caacaaagtgtagtgattgtaagccagccagctcagcaaggtcaaacatatgcaccagcc
attcaccaaattgtgcttacgaatccaacttctcttccagctggtcaaactgtccagttg
actgggcagccaaatataactccatcttcatcaccatctcctggaccagttacaaataac
caggttcctacagtaatgtcatctccatctactactcctcagtcacaaggaccccctcct
actgtcagccaaatgctttctgtgaagaggcagcaacagcagcagcattcaccagcaccc
tcacagcaacaggtacaacaagtccaacaacaacaaccggtacaaatgcaagttcagcca
caacaaggtaatgcaggagttggtcagccttcctctggtgaatctagtctaataaaacag
ctgcttctcccaaaacgaggcccttcaacccctggtggtaagcttatacttccagctcca
cagattcctccacctaacaatgcaagagcgcctagccctcaggtggtttatcaggtggcc
aataaccaagcaccaagttttggagttcaaggacagtctccagctcagcagctgttagtt
ggacagcaaaatgttcagctggtccagagtgcaatccagccccaaggggcggtacaaaca
gtacctatttctaatctacaaatattgccagggcagctgatctcaaatagcccagcaact
attttccaagggacttctggcaaccaggttaccataacagttgtgccaaatactagtttt
gctactgcaactgtgagtcagggaaatccaactcagctcattgctccagcaggaatctct
atgagtggaacacagacaggagttgggcttcaggtgcaaacacttccagctacacaagca
cctccagctggacaatcaccatgtgttgctgctcctccattcaaaggtgataaaataatt
tgccaaaaggaggaggaagcaaaggaagcaacaggtttacatgttcatgaacgtaaaatt
gaagttatggagaatccctcttgccgaagaggggcttcaaacaccagtaacggggatgca
aaagaaaatgaaatgcaggtgggaagtcttttaaatgggagaaagtataatgactccagt
ctacctccttctaactcagggaaaactcaaaatgaggccaatcagtgctcacaagtcagt
aacgggccatcattagaattgggtgagaatggagctcctggaaagcagaactttgaacaa
atggacacacaggacattaaaagtgatttgaagaagcccctagttaatggagtctgtgat
tttgataaaggagatggttctcatttgagtaaaaacattccaaatcacaaaacttccaat
catgtaggaaatggtgagatctctccagtggaacaagggaattcagatgccatgcagcaa
gagactgccaaaggtgatcaaggggaaaggatttctaatggtcctgtattaactttgagt
agttcaactgttgtaagcggtacacaggaggctgcaaaactgttaacccagcaacatagt
ggtaccaacactgatttacctaatggacctttagcttcaagtttgaattcagatgtgcct
cagcaacgcccaagtgtagttgtctcaccacaatctacagcctctgttatacaggggcat
caaatcatagcagttccacactcaggacctagagtgtcccagtctaccctgtcatctgaa
gttcggtctactaatggcacagcagaatgcaaaactgtaaagaggccagcggaggataat
gacagggaaactgttccaggaattccaaataaagtaggagttagaattgttacaatcagt
gaccccaataatgctggttgcagtgcaactatggttgctgtgccagcgggagcggatcca
agcaccgtagctaaagtagcaatagaaagtgctgttcagcaaaagcagcagcatccaaca
acatatatacaaagcatggtcacacagagcacacctgtgacaccagtacaagtacagagc
cagcaaatgagtttgcaacaaccttcttcgtaccaagcaccaagtcaacattgtgagcaa
gtgaaaaagcctggacagaacttcatgtgtctgtggcaatcttgtaaaaagtggtttcaa
acaccatctcaagttttttatcatgcagcaactgaacatggaggaaaagatgtctatcca
gggcagtgcttatgggagggttgtgaacctttccagcgacagaggttttctttcattaca
cacttacaggataaacactgctccagagatgctctacttgcaggattaaaacaagatgaa
catggacaaacaggaaatcagaaaccttccaataagcagccaactgcagggggtagtgcc
tctactcctagagcacagaaggctattgtgaatcatcctagtgctgccctcatggcgcta
agaaggggatcaagaaaccttgtcttcagagatttcacagatgaaaaagagggaccaata
actaaacacatccgattaacagctgccttaatattaaaaaatattggtaaatattcagaa
tgtggtcgcagattgctaaagagacatgaaaatcacctatcagtgctagccattagtaat
atggaagcttcctccacacttgccaaatgcctttatgaacttaattttacagtccagagt
aaagaacaagaaaaagactctgagatgctgcagtga
DBGET
integrated database retrieval system
