Carettochelys insculpta (pitted-shelled turtle): 142023420
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Entry
142023420 CDS
T11194
Symbol
DDX5
Name
(RefSeq) putative ATP-dependent RNA helicase DDX5
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Pathway
ciz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
142023420 (DDX5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ciz03041
]
142023420 (DDX5)
03009 Ribosome biogenesis [BR:
ciz03009
]
142023420 (DDX5)
Enzymes [BR:
ciz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
142023420 (DDX5)
Spliceosome [BR:
ciz03041
]
Complex A
U1 snRNP components
U1 related factors
142023420 (DDX5)
Complex B
142023420 (DDX5)
Ribosome biogenesis [BR:
ciz03009
]
Eukaryotic type
Pre-60S particles
Helicases
142023420 (DDX5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
P68HR
ResIII
Helicase_C_2
ERCC3_RAD25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
142023420
NCBI-ProteinID:
XP_074870394
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All DBs
Position
20:complement(17963323..17972021)
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AA seq
601 aa
AA seq
DB search
MPGYDMDRGFGGPRFGGSRGGPLSGKKFGNPGEKLTKKKWNLDELPKFEKNFYQEHPDVV
RRTVQEVEQYRASKEITVKGHTCPKPLINFYEANFPANVMEVIQAQNFTEPTAIQAQGWP
VALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLAPTRELAQQVQQV
AAEYSRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNLRRCTYLV
LDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKEYVHINIGALE
LSANHNILQIVDVCHDVEKDEKLIRLMEEIMSEKENKTIVFVETKRRCDDLTRKMRRDGW
PAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYI
HRIGRTARSTKTGTAYTFFTPNNIKQVSDLISVLREANQAINPKLLQLIEDRGSGRSRGD
RRDRYSAGKRGGFGFRERENFERTYGPVGKRDFGAKAQNGGYSAQAYSNGTAFGNSFVSA
GLQTSFRAASTPTAAYQNGYDQQYASNIATMHNGMNQQQYAYPATGAAPMIGYPMPTGYT
Q
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgcctggatacgacatggacagagggtttggtggccctcggtttggaggaagcagaggt
ggaccattatctggaaagaaatttggaaaccctggtgagaaacttacaaaaaagaaatgg
aacctagatgagctgcccaagtttgagaagaatttttatcaagagcatcctgatgtggtt
agacgcactgtgcaagaggttgaacagtacagagcaagcaaagaaatcaccgtgaagggg
catacctgtccaaaaccacttataaatttctacgaagctaactttcctgcaaatgttatg
gaagtaattcaggcacagaatttcactgaaccgactgctattcaagcacaagggtggcct
gttgctttgagtggactggatatggttggagtagcacaaactggatcggggaaaactttg
tcttacttgttgcctgccatagtgcatataaatcatcagccattcctagagagaggagat
ggacctatttgtctggtgctggcaccaactcgagaactggctcaacaagtgcagcaagtg
gctgcagaatacagcagagcatgtcgtttgaagtctacttgtatttatggaggtgctcca
aagggaccccaaattcgtgatttggaaagaggtgtggaaatctgtattgcaacacctgga
agactcatagactttttagaagctggaaagaccaatctcaggagatgtacttaccttgta
cttgatgaagctgacagaatgcttgacatgggatttgaacctcaaatcagaaaaatcgta
gatcagattaggcctgacaggcagactctaatgtggagtgcaacgtggcccaaagaagtt
agacagcttgctgaagactttttgaaagaatatgtacacatcaacattggggcattggaa
ctaagtgcaaaccacaacatacttcagattgtggatgtatgtcatgatgtagagaaggat
gagaagcttattcggttgatggaagaaattatgagtgagaaagaaaacaaaactattgta
tttgtggaaaccaaaagacgctgtgatgatcttaccagaaaaatgagaagagatgggtgg
ccagcaatgggtatccatggtgacaaaagtcagcaagagcgagactgggttctaaatgaa
ttcaaacatggaaaagctcctatcctgattgccacagatgttgcatccagaggtctagat
gtggaagatgtgaaatttgtcatcaattatgactaccctaactcctcagaggactatatc
caccgaattggacgaactgcccgtagtaccaaaacaggcacagcctacacattctttact
cctaacaatataaagcaagtaagcgacctcatctctgtccttcgggaggctaatcaagct
atcaatcccaaattacttcagctgattgaagacaggggttcaggtcgttcccgaggtgat
cgacgtgacagatactctgcgggcaaaaggggtggatttggttttagagagagagagaat
tttgagagaacttacggtccggtaggaaagagagactttggtgcaaaagcccaaaatggt
ggctacagtgctcaagcctacagtaatggaactgcatttggaaatagctttgtctctgct
gggttgcagacgagcttccgagctgctagtactcctacagcagcttaccaaaatggttat
gatcaacagtatgcaagtaatattgcaactatgcacaatggtatgaaccaacagcagtat
gcatatcctgccactggtgctgctcctatgataggttacccaatgccaactggttacact
caataa
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