Carettochelys insculpta (pitted-shelled turtle): 142023735
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Entry
142023735 CDS
T11194
Symbol
TNRC6C
Name
(RefSeq) trinucleotide repeat-containing gene 6C protein isoform X1
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ciz03019
]
142023735 (TNRC6C)
03036 Chromosome and associated proteins [BR:
ciz03036
]
142023735 (TNRC6C)
Messenger RNA biogenesis [BR:
ciz03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
142023735 (TNRC6C)
Chromosome and associated proteins [BR:
ciz03036
]
Eukaryotic type
Gene silencing
piRNA pathway
142023735 (TNRC6C)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
M_domain
Ago_hook
UBA_7
UBA
RRM_1
RRM_occluded
UBA_Ucp12
UBA_HERC2
RRM_ACIN1
UBA_NBR1_C
DUF4718
THOC7
Motif
Other DBs
NCBI-GeneID:
142023735
NCBI-ProteinID:
XP_074871102
LinkDB
All DBs
Position
20
Genome browser
AA seq
1931 aa
AA seq
DB search
MEEKKKKKQEEKKKKEGAQKKAAEQKTKVPEPIKTSLSQPQPAGTGTSTSTSTISNSSNG
KRASANGQQPAASRYLPREVPPRFRQQEQKQLLKRGQPLPTGTLTGANPPQGTGQAGASP
PPQPGAGGQHHPSKTQTDLSHSSLGDHYENSHWGQQPTFRSETNCSWDKVIIDRTDKEAW
PSITGTETESASECTTETDSASNCGSENSSMATGSAPGNFAGHSKKTNGNNGANGALVQS
TSNQSALGAGGATGNGNSARVWGVATSSNSGLAHCSASCGDGKMDNMIADGRSQNCWGAS
NSNAGINLNLNPNANPAAWPVLGHEGTVGAGNPSSICSPVSAIGQNIGNQNGNPTGTLGA
WGNLLPQESTEPQTSTSQNVSFSVQPQNLNTDGPNNTNPMNSSPNPINAMQTNGLPNWGM
AVGMGAIISPHLQGLPGANGTSVSQVSGGSGEGMGNSVWGISPGNPATGNSNSGFSQGNG
DTVNSALSAKQNGTSSAVQKEGNGASAWDSGPPAGPGVLAWGRGNGNSSVGSVHSGAWGH
PSRNTNNGVNGEWGKPPNQHSNNDINGKGSAGWDSSSVASQNPAMHQGNEQINSWAKAAA
SVTTASEESNDSSGGQNEGSTGREGAGESRRRDKGVVDQGQVQLPRNDLDPRVLSNTGWG
QTPVKQNTAWEFEESPRSEQKNDNGTEAWGCTASQSSNSGGKNDGSIMNSTNTSSVSGWV
NSPPAAVPTNTGWGDNNNKAPNGPGGWGESASSTAVNAAAATAAKSGHTWSGTANQEDKS
PTWGEPQKPKSQNWRDEQKSNPGWSSGGGDWTESSSVPGHLVEGKKNGSGWDADNRAGSG
WNDTTRSGTSGWGNGTNTKANTGTSWGESLKPSPQQNWASKPPDNSVSNWGGAASVKQTG
SGWVGGPVPPKQKDSSEATGWEEPSPPSIRRKMEIDDGTSAWGDPNYNNNKTVNMWDRNN
PVIQSNTTNNTTTTTTTIINTNMAEPQPPHQSSAQPNRSPLLGPAGWGEMPTIHTKTESS
WGEPSSPSAAVDNGTSAWGKPPSSGTGWGDNSAESAGTYGRANAPAAAPALCKPASKSMQ
EGWGSGGDEVNLSTSQWEDEEGDIWNNTASQESNSSCNSWGNAPKKGLQKGMKTSSKQDE
AWIMNRLIKQLTDMGFPREPAEEALKSNNMNLDQAMSALLEKKVEMDKRGMGVTDYNGMV
TKPLGCRPPPISKESSMDRPTFLDKDGGLVEEPTTSPFLPSPSLKLPLSNSALPNQTLSG
IASGLGMQNLNSSRQIPSGNLGMFGNSGAAQARTMQQPQQPPVQPLNSSQPSLRAQVPQF
LSPQVQAQLLQFAAKNIGLNPALLTSPINPQHMTMLNQLYQLQLAYQRLQIQQQMLQAQR
NVSGPMRQQEQQVARTINNMQQQIQQHQRQLAQALLMKQQPPPPHLSLHPSAGKSAMDSF
SPHSQAPGLSDLQTKEQQSSTNTFAPYPLAGLNPNMNVNSMDITGGLSVKDASQSQSRLP
QWTHPNSMDNLSSAASSLDQNSSKHGAIPGGLSIGPPGKSSIDDSYGRYDLIQNSDSPAS
PPVAVPHSWSRAKTDSDKISNGSSINWPPEFHPGVPWKGLQNIDPENDPDVTPGSVPTGP
TINTTIQDVNRYLLKSGGSSPTSSQNATLPSSSAWPLSASGYSSSFSSIASTPSIAGKLS
DIKSTWSSGPISHTQASLSHELWKVPRNTTAPARPPPGLTNTKPSSTWGASPLGWTSSYS
SGSAWSTDSSGRTSSWLVLRNLTPQIDGSTLRTLCLQHGPLITFHLNLTQGNAVVRYSSK
EEAAKAQKSLHMCVLGNTTILAEFAGEEEVNRFLAQGQPLPPTSSWQSNTGTNQTRMGSA
SSSHGLVRNDAGHWNTPCLGGKGSSDLLWGGVPQYSSSLWGPPNTDDGRVIGSPTPLNTL
LPGDLLSGESI
NT seq
5796 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaagaaaaagaaaaagcaggaagaaaagaaaaagaaggaaggtgctcagaaa
aaggctgctgaacaaaaaaccaaagtgccagaacctattaagaccagtttaagccagccc
cagcctgccggtactggtaccagtacttccaccagcactatttccaacagcagcaatggc
aagcgtgcatctgctaatgggcagcagccagctgcatcccgttacctgcctcgtgaggtg
cctccacgcttccgtcaacaagaacagaagcagctcttaaagagaggtcagccactgcct
actggaactctgaccggtgcaaacccaccacaaggtactggacaagcaggtgcaagtcct
cctccacagccaggagcaggtggacagcatcatcccagtaagacccaaacagaccttagt
cacagtagtttgggagaccattatgaaaattcccactggggacagcagcccactttcaga
agtgaaaccaattgcagctgggataaagtgataatagacaggactgacaaggaggcgtgg
ccttccattacaggaactgagactgaatctgcttcagaatgtactacagaaactgactct
gcctccaactgtggctcagagaacagtagcatggctacagggagtgccccaggcaacttc
gctggacattcaaagaaaactaatggcaataatggcgccaatggagcactcgtccaaagc
acttctaaccagagtgcccttggagctggtggagcaactggtaatggaaactcagccaga
gtgtggggtgtggccacaagctctaactctggcctagctcactgctctgccagttgtggg
gatggaaagatggacaacatgattgcagatggtagaagtcaaaactgctggggtgcttcc
aactcaaatgctggcattaatcttaaccttaaccctaatgccaatccagctgcctggcct
gtacttggacatgaaggaactgtgggagcaggcaacccttccagtatttgcagtccagtc
agtgccataggtcagaatataggcaaccagaatggtaacccgacaggcaccttaggtgct
tggggaaacttgctgccgcaagagagcacagaaccacaaacgtccacttctcagaatgtg
tctttcagcgtacaacctcagaaccttaacactgatggaccaaataacactaaccccatg
aactcttcaccaaaccctatcaatgcaatgcagactaatggactgccaaactgggggatg
gctgttggtatgggggccatcatctcgccccacctgcaaggccttcctggtgctaatgga
acatcagtttctcaagtcagtgggggcagtggtgaaggaatgggcaattctgtatgggga
atatccccaggtaatcctgccacaggaaacagcaattctgggttcagtcaggggaatgga
gacactgtgaactcagcattaagtgctaaacagaatggaactagcagcgctgtgcaaaag
gaaggaaatggagcaagtgcatgggattcaggacctcctgccggtcctggagtactggca
tggggcagaggcaatggcaacagtagtgttggtagcgtgcattctggagcttggggccac
cccagccgtaacaccaataatggtgttaatggtgaatggggcaagcccccaaaccagcat
tccaataatgacatcaatggtaaaggatcagcagggtgggatagctctagtgttgccagc
cagaatcctgccatgcatcagggcaatgaacaaataaattcttgggccaaagctgcagca
tcagtcacaacagctagtgaggaaagtaatgacagtagtggaggtcaaaatgagggcagc
actggcagagaaggagcaggagagtctcgaaggagagataagggggtagtagaccaaggt
caagtccagttgccaaggaatgaccttgacccaagagtgctgtccaatacagggtgggga
cagactcctgtaaagcaaaacactgcctgggaatttgaagaatccccaaggtctgaacaa
aagaatgacaatggaacggaggcctggggttgtacagcttctcagtcttcaaactcaggg
gggaagaatgatgggtccatcatgaacagtacaaatacctcttcagtatctgggtgggtc
aactctccacccgcagctgttccaacaaatacaggttggggagacaacaacaacaaagcg
ccaaatggcccagggggatggggagaatcagcaagctctactgctgttaatgctgctgct
gctactgctgccaaaagtggccacacttggagtgggactgcaaatcaggaggacaaatca
cctacatggggtgagcctcagaaacccaaatctcaaaattggagagatgaacagaaatca
aatccaggctggagttcaggaggaggagattggacggagtcgtcgtctgtccccggacac
ttggttgaggggaagaagaatggatctggatgggatgctgacaatagagcagggtcgggt
tggaatgatactacaaggtctgggaccagtggatggggaaatggcacaaacaccaaggct
aatacaggtacaagttggggagaatctctgaaacctagccctcaacagaattgggctagt
aaacccccagacaacagtgtgagtaactggggaggagcagcttctgtaaaacagactggg
tcaggatgggttggtgggccagtgccacccaaacaaaaagatagcagtgaggcaactggc
tgggaagagccttctccaccatcgattcgccgcaagatggaaattgatgatggtacatca
gcgtggggtgatccaaactacaacaacaacaaaactgtaaacatgtgggatagaaacaac
cctgtaattcagagtaataccacaaacaacaccaccaccactactacaaccattatcaac
acaaatatggctgaacctcagccaccacatcagtcaagtgcccagccgaaccggtcccca
ctgcttggtccagcaggctggggagagatgcctactatccatacaaagactgaatcctct
tggggagagccctcatccccttctgctgcagttgataacggcacatcagcatgggggaaa
ccccccagcagtggtacagggtggggagataattctgctgagtcagcaggaacctatgga
agagcaaatgctccagctgctgccccagcactgtgcaagccagcttctaaatctatgcaa
gaaggctggggcagtggtggggacgaagtgaacctcagtactagtcagtgggaagatgaa
gaaggagatatatggaataatactgcttcacaagagagtaactcctcctgtaattcctgg
gggaatgccccaaagaaaggacttcaaaagggcatgaagacatctagtaagcaagatgag
gcctggatcatgaaccgtctgataaaacaactcacagacatgggcttcccaagagagcca
gcagaagaggccttgaagagcaacaatatgaatcttgatcaggccatgagcgctctgctg
gaaaagaaggtggaaatggacaagcgtggaatgggagtgaccgactataatggaatggtc
accaaaccccttggctgccgcccaccaccaatctccaaagagtcttccatggaccgcccc
accttccttgacaaggatggcggcctagtggaagagcccactacttcaccatttttgcct
tcaccaagcctgaagctccccctttcaaacagtgcactccctaatcagaccctgagcgga
attgcctcagggctgggcatgcaaaacttgaattcttctagacagataccgagtggcaat
ctgggtatgtttggcaatagcggagcagcacaagccaggaccatgcaacagccgcagcaa
ccgccggtgcaacctcttaactcatcccagcctagtcttcgtgctcaagtgcctcagttt
ctatcccctcaggttcaagcacagcttttgcagtttgcagcaaaaaacattggtctcaac
cctgcactattaacctcgccaattaatcctcagcatatgacgatgttgaaccagctctat
cagctgcagctggcataccaacgtttacaaatccagcagcagatgttacaggctcagcgt
aatgtttccggacccatgagacaacaggagcagcaagttgcacgtacaatcaataacatg
cagcagcagatccagcagcaccagcgacagctggcccaggcactgcttatgaagcagcag
cctccccctccccatctatctttgcacccctctgcaggcaaatcagccatggatagcttt
tcaccccattcccaggctccgggcctatctgacctgcagaccaaagagcaacagtcttca
acgaacacctttgctccttaccctcttgctggactgaatccgaacatgaatgtaaacagc
atggacattactggtggtttgtcagtgaaggatgcttctcagtctcagtctcgccttcct
cagtggacacaccccaactcaatggataatctatctagtgctgcttcttcactggaccag
aactctagcaagcatggtgctattcctggaggtctaagtattggtcctccaggaaagtcc
tccattgatgactcttatggacggtacgatctgatccaaaacagtgattcaccagccagt
ccacctgtagctgttcctcacagctggtcacgtgccaaaactgatagtgataaaatctcc
aatggttctagcattaactggccaccagaatttcatcctggagtgccatggaaaggattg
cagaatattgatcctgagaatgacccagatgtcactcctggaagtgttccaactggaccg
accattaataccaccatacaagatgttaatcgctatcttctcaagagtggagggtcatcc
ccaacatcatctcagaatgccacgctgccttcatcgagtgcctggccgcttagtgcctcc
ggctacagtagctctttcagcagcattgcatccacacctagcattgcaggtaaattgtca
gacatcaagtctacttggtcctctggcccaatttctcacacacaagcttctctatcccat
gagctatggaaggtaccccgaaacactactgctcctgcgaggccacctccaggtttaaca
aacaccaagccatcatctacctggggtgccagcccactgggttggaccagctcttattct
tctggttctgcatggagtactgacagctcaggaagaacaagcagctggctggttctgcgt
aacctcacaccccagattgatggttccacactgcggacactgtgtttgcaacatggccct
ctaattacattccacctgaatctgactcaagggaatgctgtggtccgctacagttccaag
gaagaagcagctaaggctcagaagtctcttcatatgtgtgttttgggaaacactaccatc
ttggctgagtttgctggggaagaagaagtaaaccgtttcttagcacaaggccagccactg
ccacccacctccagttggcagtccaacactggaaccaatcagactcgtatgggctccgca
agcagctctcatggattggtgcggaatgatgcaggccactggaatactccctgcctgggt
ggcaaagggagcagcgatttgctctggggtggggtccctcagtactcaagcagcctttgg
gggccccccaataccgacgatggcagggttattggcagcccaacgcctctgaatactctg
ctgccaggtgatcttctcagtggggagtccatctag
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