Carettochelys insculpta (pitted-shelled turtle): 142023814
Help
Entry
142023814 CDS
T11194
Symbol
PRPF4
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Pathway
ciz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
142023814 (PRPF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ciz03041
]
142023814 (PRPF4)
Spliceosome [BR:
ciz03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
142023814 (PRPF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_Prp19
WD40
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
WD40_Gbeta
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
PRP4
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Beta-prop_Aladin
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_DCAF4
Beta-prop_EIPR1
Beta-prop_WDR41
Beta-prop_RIG_2nd
Beta-prop_SCAP
Beta-prop_Vps41
Beta-prop_IFT122_1st
WD_LRWD1
Beta-prop_IFT140_1st
WD40_like
Beta-prop_WDR35_TULP_N
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
142023814
NCBI-ProteinID:
XP_074871246
LinkDB
All DBs
Position
21:complement(2678537..2694616)
Genome browser
AA seq
540 aa
AA seq
DB search
MAASRAPAGRAAPGRAVLAQPGPAPSPRATKTKQSEDGDAPLPKRSHIFYGSLEEKERER
LAKGELGLLGKDRVKAAFEAGNINITSGEVFDLEDHISERQAEVLAEFERRKRARQINVS
TDDSEVKACLRALGEPITLFGEGPAERRERLRNILSVVGTDALKKTKKDDEKSKKSKEEY
QQTWYHEGPNSLKTARLWIANYSLPRATKRLEEARLYKEIPEATRTSQKQELHKSLRSLN
NFCSQIGDDRPISYCHFSPNSKLLATACWSGLCKLWSVPDCNLVHTLRGHNTNVGAIVFH
PQATVSLDKKDVNLASCAADGSVKLWSLESDEPVADIEGHTMRVARVTWHPSGRFLGTTC
YDHSWRLWDLQAQEEILHQEGHSKGVYDIAFHIDGSLAGTGGMDAFGRVWDLRTGRCIMF
LEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRKCIYTIPAHQNLVTGVKYEPTHG
NFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISLDGQLIATCSYDRTFKLWMAE
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggctgcctcgcgagctcctgccgggcgcgccgccccggggcgggcggtgcttgcgcag
ccgggcccggctccatccccgcgggcaacaaaaaccaagcagtcagaggatggcgatgcc
cccctacccaagagatcccatatcttctatggcagtttggaggagaaggaaagagagcgt
ctagccaaaggcgaactggggctgctgggaaaagacagagtgaaagctgcttttgaggca
ggcaatattaatataactagtggtgaggtttttgatcttgaagatcacataagtgagcgt
caggcagaagttttggctgagtttgagcgcaggaagcgtgccaggcagatcaatgtttcc
actgatgactctgaagtcaaggcttgcctacgagcacttggggagcccatcacgctcttt
ggagaggggcctgcagaacggcgagaaagattgagaaatattctctcggtggttggcaca
gatgctctaaaaaagaccaagaaagatgatgaaaaatctaagaaatcgaaagaagagtat
cagcaaacttggtaccatgaagggcccaacagcctgaaaaccgctaggttgtggatcgcc
aactattcactccccagggcaacaaagcggctggaagaagcccgtctttataaagaaatt
ccagaggcaacaaggacatcccagaagcaagaactgcacaaatccttgaggtccttgaat
aatttctgcagtcagattggggatgaccgcccgatatcttactgccatttcagtcccaat
tccaaactcctggctacagcctgctggagtggcctgtgcaaactctggtctgtgcctgac
tgcaatcttgttcatactttacgagggcacaacactaatgtaggagcaatagtgttccat
ccccaagccactgtctccctggacaagaaggacgtcaacctggcctcttgtgcagctgat
ggctctgtcaagctctggagtctggaaagtgatgagccagtggcagatatcgaaggccac
accatgagagtggcgcgagtgacgtggcatccctccgggaggttccttgggaccacctgc
tacgatcactcctggcgcctgtgggacctgcaagctcaagaggagattctccatcaggag
ggacacagcaagggggtctacgacattgctttccacattgacggttctctcgccgggact
ggtggcatggatgcctttggtcgggtgtgggatctgcgaaccgggcgctgtatcatgttc
ctggagggccacctgaaggaaatctatgggattaacttttcccccaatgggtatcacata
gccacgggcagcggggacaacacatgcaaggtgtgggacctccgccagaggaagtgcatc
tacaccatccctgcccaccagaacctggtgactggagtgaagtatgaaccgacacatggt
aatttcctgctcaccggtgcttatgacaatacagccaagatctggactcacccaggctgg
tcccctctgaaaacgctggctggccacgaggggaaagtaatgggactggatatctccttg
gatgggcagctaatagcaacctgctcatatgaccggaccttcaagctgtggatggcagag
tag
DBGET
integrated database retrieval system
