Carettochelys insculpta (pitted-shelled turtle): 142023842
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Entry
142023842 CDS
T11194
Symbol
GAPVD1
Name
(RefSeq) GTPase-activating protein and VPS9 domain-containing protein 1 isoform X1
KO
K27566
GTPase-activating protein and VPS9 domain-containing protein 1
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ciz04131
]
142023842 (GAPVD1)
Membrane trafficking [BR:
ciz04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
142023842 (GAPVD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGAP
VPS9
DUF5601
DUF5740
Motif
Other DBs
NCBI-GeneID:
142023842
NCBI-ProteinID:
XP_074871323
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All DBs
Position
21:23700825..23779783
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AA seq
1472 aa
AA seq
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MHSECCVVLSPLKMVKLDIHTLAHHLKQERLYVNSEKQLIQRLNADVLKTAEKLYRTAWI
SKQQRINLDRLIITSAEASPAECCQHAKVLEDTQFVDGYKQLGFQETAYGEFLNRLRENP
RLIASSLVAGEKLNQDNTQSVIHTVFTSIYGNCIMQEDESYLLQVLRYLIEFELKESDNP
RRLLRRGTCAFSILFKLFSEGLFSAKLFLTATLHEPIMQLLVEDEDHLETDANTLIERFS
PAQQEKLFGEKGTERFKQKVQEMVDSNEAKLVALVNKFIGYLKQNTYCFPHSLRWIVSQM
YKTLSCVDRLEVGEVRAMCTDLLLACFICPAVVNPEQYGIISDAPINEVARFNLMQVGRL
LQQLAMTGSEEGDPHMKSNLGKFDKSCVAAFLDVVISGRAVETPPMSSVNLLEGLSRTVV
YMTYSQLINLVGFMRNVMSSDQLREDRMALENLLANLPQNKSGKSSSLEMTPYSTPQLSP
ATTPANKRNRLPIATRSRSRSNIQDHGDHEGSSQDSIQDIQPEEVLVISLGTGPQLTPGM
MTETEVLNMQLADGGQGDVPVDETKLHGKPDKTLRFSLCSDNLEGISEGPSNRSNSVSSL
DLEGESVSEIGAGPSGSNGVEALQLLEHEQATTQDNLDDKLRKFEIRDMMGLTDDRDISE
TVSETWSTDVLGSDFDPNIDEDRLQEIAGPTAENMLGNLLCLPGTGSVLLDPCTGSTISE
TTSEAWSVEVLPSDSEAPDLKQEERLQELESCSGLGSTSDDTDVREVSSRPSTPGLSVVS
GISATSEDIPNKIEDLRSECSSDFGGKDSVTSPDMDETAHGASQLTSPPSQSDSLLALFD
PLSSHEGASAVVRPKVHYARPAHPPPDPPILEGPMGSSEARFPNFGSHILIPTDLEAFKQ
RHSYPDRLVRSRSSDIVSSVRRPMSDPGWNRRPGNEERELPTQTPNIGVAASVAAPQSSS
SSPSKDSSRGEMEERKDSDDEKSDRNKPWWRKRFVSAMPKAPIPFRKKEKQEKDKDELVP
DRFSALQDDPSPRLSAQSQAAEDILDKYRNAIKRTSPSEGAIVNYENADIIGDGESMHDS
PRDEALQNMSADDLPDSASQVAQPQDSAFSYRDAKKKLRLALCSADSVAFPMLTHSTRNG
LPDHTDPEDNEIVCFLKVQLAEAINLQDKNLMAQLQETMRCVSRFDNRTCRKLLASIAED
YRKRAPYIAYLTRCRQGLQTTQAHLERLLQRVLRDKEVANRYFTTVCVRLLLESKEKKIR
EFIQDFQKLTAADDKTAQVEDFLQFLYGAMAQDVIWQNASEEQLQDAQLAIERSVMNRIF
KLAFYPNQDGDILRDQVLHEHIQRLSKVVTANHRALQIPEVYLREAPWPSAQSEIRTISA
YKTPRDKVQCILRMCSTIMNLLSLANEDSVPGADDFVPVLVFVLIKANPPCLLSTVQYIS
SFYANCLTGEESYWWMQFTAAVEFIKTIDDRK
NT seq
4419 nt
NT seq
+upstream
nt +downstream
nt
atgcatagtgagtgttgtgtagtcctctcacccttaaagatggtgaagctggatatccat
actctggctcatcacctcaaacaggaacgcctttatgtaaattctgaaaagcaacttatt
cagagattaaatgcagatgtattgaagactgccgagaaactgtaccgcacagcatggatt
tccaaacagcaaaggattaacttggacagacttatcataacaagtgctgaagcgtctcct
gctgaatgctgccagcatgccaaagtcttggaggacacacagtttgttgatgggtacaag
cagttgggatttcaagagacagcttatggagagttcctcaacaggttgagagagaacccc
aggcttattgcttcctctctggttgctggagagaaactaaaccaggacaacacacaaagt
gtcattcacacagtctttacctccatctatggtaattgcatcatgcaggaagatgaaagt
tacctccttcaagttttgcgatacttgatagagtttgaattgaaagaaagtgacaacccc
agaaggcttttgaggagaggtacctgtgcattcagcattttattcaaacttttttcggaa
ggactcttctctgcaaaactcttcctcactgcaacgttgcatgaaccaatcatgcagctg
ctggtggaagacgaagaccacctagaaactgatgcaaacacactgattgagagattctct
cctgcacaacaggaaaaactctttggggaaaaaggcacagaaaggtttaaacaaaaagtc
caagaaatggtagattccaatgaagctaaattagtggctttggtgaacaaattcattggt
tatctcaagcagaacacatactgctttcctcatagcttgagatggattgtatcacaaatg
tacaagacactctcctgcgtagacaggctggaggttggggaggtgcgagcaatgtgcacg
gatctcctgctcgcatgtttcatttgtcctgcagttgtcaacccagaacagtatggaata
atttcggatgccccaataaatgaagtggcaagatttaatctgatgcaggttgggagactt
ttgcagcagttggcaatgacaggatctgaagagggagatccacacatgaagagcaacctt
ggcaaattcgacaaaagctgtgttgctgctttcctggatgttgttattagtgggcgtgct
gtggaaactccgccgatgtcctcagtgaaccttctagaaggattgagtaggacagtggtt
tatatgacatacagccaactcattaatctggttggttttatgcgaaatgtaatgtcaagt
gaccagttgagggaagatcggatggctctggaaaacttgttggcaaacttacctcagaac
aaatctgggaaaagtagcagccttgaaatgactccttacagtaccccacaactttcccct
gcaactaccccagccaacaaaagaaatcgactgcctatagctacccgtagcagaagccga
tcaaatattcaagatcatggagaccatgaaggatcctcccaagattctatacaggatatt
cagccagaagaagtactggttatttctttgggaacaggtccacagctcacaccgggtatg
atgacagaaactgaggtcttaaatatgcagcttgctgatggaggacaaggagatgtccct
gttgatgaaaccaaactccacggtaaacctgataaaaccttgcgcttttccctctgcagt
gataatctggaaggaatatctgaaggtccttcaaatcgctccaattctgtgtcctctttg
gatttagaaggggagtctgtgtcagagattggggcaggaccttctgggagcaatggtgtt
gaagccttgcaactgttagaacatgagcaagctacaacacaggataatcttgatgacaag
ctccgtaaatttgaaattcgtgatatgatgggattgactgatgatagggatatatcagaa
actgtgagtgaaacctggagcacagatgtcttgggcagtgacttcgatccaaatattgat
gaagaccgtttgcaagaaattgcaggtcctactgcagagaacatgcttggcaacttgctt
tgtttgccaggtacaggatctgtgctgcttgacccctgcacagggtcgaccatatcagaa
accaccagcgaagcttggagtgtagaggtgttgccaagtgattcagaggccccagaccta
aagcaggaggagagactgcaggagttggaaagctgttcagggctgggcagcacctcggat
gacactgatgtgagggaggtcagttctcgtcccagtacaccaggcctcagcgttgtgtca
ggtatcagtgcaacctccgaggatattcctaataagatcgaggaccttaggtctgaatgt
agctctgactttggaggtaaagattctgtgacaagtcctgatatggatgaaacagcacat
ggagccagtcagttgacttctcctccttctcagtcggactctttgcttgcactgtttgac
cctttgtcctcacatgaaggtgcatcagcagtggtgaggcctaaagtgcactatgccaga
cctgctcatcctccaccagatcccccaattctagaaggacctatgggaagcagtgaggcc
agatttccaaattttggctcccacatcttaatcccaactgatttggaggcattcaaacaa
aggcattcctacccagacagactagtccgcagcagaagctctgacatagtgtcatcagtt
cggaggcctatgagtgatcctggctggaacagacgacctggtaatgaagaaagagaactt
cctacacaaacaccaaacataggagtagctgcttcggtggctgcacctcagtcctcttca
tcatcccccagtaaagactcctctagaggagagatggaggaacgaaaagatagtgatgat
gagaaatctgacaggaacaaaccctggtggaggaagcgttttgtttctgctatgcccaaa
gctcctataccatttagaaaaaaagaaaaacaagaaaaagacaaagatgagttggtgcct
gacagattctcagcacttcaagatgatcccagtcccaggctaagtgcacagtcccaggcc
gcagaggatatccttgacaaatatcggaatgctattaagcgaactagcccaagtgaagga
gctatagtcaattatgaaaacgcggatataattggagatggcgaaagtatgcatgattct
ccacgtgatgaagctcttcagaatatgtcagctgatgacctcccagattctgcaagtcaa
gttgcacagccacaagattctgccttctcttacagggatgcaaagaagaaactgagactg
gctctttgttcagcagattctgttgcctttccaatgttgacccattcaacaagaaatggt
ctaccagatcacactgaccctgaagacaacgaaattgtgtgcttcttgaaagttcagtta
gccgaagctattaacctacaagataagaacttgatggcccaactgcaggagacaatgcgc
tgtgtaagccgttttgataataggacatgtcgaaagctactggcttccattgcagaggat
tataggaagagggctccatatattgcttacttaactcgatgtcgccaaggcctacagacc
acacaagcccatctggaaaggctcctgcagagggttctacgtgataaggaagtggccaac
agatatttcactacagtgtgtgtgaggttacttctggaaagcaaagaaaaaaagataaga
gaatttattcaagattttcagaagctcactgcagcagatgataaaacagcccaagtggaa
gacttccttcagtttctgtatggggccatggcccaggatgtcatctggcagaacgccagt
gaggagcagctccaggatgcacagctagccatagaacgcagtgtgatgaatcgcattttc
aaacttgcattctatcctaatcaggatggggacattttgcgcgaccaggtccttcatgag
catatccaaagattgtctaaagtagtgacagcaaaccaccgagcacttcaaataccagag
gtatatctccgggaagcaccatggccatctgcacagtctgaaatccgcacaattagtgct
tacaaaaccccacgagacaaagtgcagtgcattctacgaatgtgttcaaccatcatgaac
ttgctgagtttggccaatgaagattcggtcccaggggcagatgatttcgttcctgttttg
gtgtttgttctgataaaggcaaatccaccctgtttgttgtccacggttcagtacattagt
agcttctatgctaactgtttaactggagaagaatcttattggtggatgcaattcacagca
gcagttgaattcattaaaaccattgatgatcgtaagtga
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