Carettochelys insculpta (pitted-shelled turtle): 142023852
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Entry
142023852 CDS
T11194
Symbol
RC3H2
Name
(RefSeq) roquin-2 isoform X1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ciz03000
]
142023852 (RC3H2)
04121 Ubiquitin system [BR:
ciz04121
]
142023852 (RC3H2)
Transcription factors [BR:
ciz03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
142023852 (RC3H2)
Ubiquitin system [BR:
ciz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
142023852 (RC3H2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-CCCH
zf-RING_UBOX
zf-RING_2
zf-CCCH_4
Prok-RING_4
zf-C3HC4
zf_CCCH_4
zf-CCCH_UNK
zf-C3HC4_4
zf-C3HC4_2
Xin
Motif
Other DBs
NCBI-GeneID:
142023852
NCBI-ProteinID:
XP_074871346
LinkDB
All DBs
Position
21:complement(21717471..21762709)
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AA seq
1191 aa
AA seq
DB search
MPVQAAQWTEFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPFDQTTINTD
IDVLPVNFALLQLVGAQVPDHQTVKLSNLGENKHYEVAKKCVEDLALYLKPLSGGKGVAS
LNQSALSRPMQRKLVTLVNCQLVEEEGRVRAMRAARSLGERTVTELILQHQNPQQLSANL
WAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKTSIG
HVVQLLYRASCFKVTKRDEDSSLMQLKEEFRSYEALRREHDAQIVHIAMEAGLRISPEQW
SSLLYGDLAHKSHMQSIIDKLQSPESFAKSVQELTIVLQRTGDPANLNRLRPHLELLANI
DPNPDATSPTWEQLENAMVAVKTVVHGLVDFIQNYSRKGHETPQPQTNSKYKTSMCRDLR
QQGGCPRGTNCTFAHSQEELEKYRLRNKKISATVRTFPLLNKASVNSTVSTTAGSVISVI
GSSETTGKMVPSSNGIANVESGVPQLIPRCADTSLRALENIKKGGKPGTSGQNVSGSPTE
SLSENKICSPPKTPVSQAAATSAGGPNIGTEMNSLPPKSSPFVTRVPVYPPHSDNVQYFQ
DPRTQLSYEVPQYPQTGYYPPPPTVPAGVAPCVPRFVRSSNVTEASLPPASVPYAEHYST
FPPRDRLNSPYQPPPPQPYGPVPPVPSGMYAPVYDSRRIWRPQMYPRDDIIRSNSLPPMD
VMHSSVYQTSLRERYNSLDGYYSMACQPPNEQRTVPLPREPCGHLKTSYDDHLRRKPEQW
AQYHSQKTPLVSSTLPMATQSPTPPSPLFSVDFSTEFSESVADLSGTKFEEDHLSHYSPW
SCGTIGSCINAIDSEPKDVIANSNAVLMDLDSGDVKRRVHLFETQRRAKEEDPIIPFSDG
PIISKWGAISRSSRTGYHTTDPIQATASQGSATKPISVSDYVPYVNAVDSRWSSGGSDST
SSARYVERDRFIVTDLSGHRKHSSTGDLPSIELQQAKSNSLLLQREANALAMQQKWNSLD
EGSRLTLNLLSKEIDLRNGETDYIEDCADTKPDRDIELELSALDTDEPDGQGEQIEEILD
IQLGISSRDEKLLNGATIENGHSLKQHQKEPLEQKKQSLGEDLVILKEQKTVLPVTSCFS
QPITGSFSNASSLPISTSVSIGSLIMKSAHSMSEDKNDFLKPIANGKMVNS
NT seq
3576 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgcaggctgctcagtggacagagtttctgtcctgtccaatctgctacaatgag
tttgatgagaacgtgcacaagcccatcagcttaggttgctcacacaccgtctgtaagacc
tgcttgaacaagcttcatcgcaaagcatgtcctttcgaccagactaccatcaacacagac
attgatgtgcttcctgtaaactttgcacttctccagttagttggagcccaggtaccagat
catcagacagtgaagttaagtaacctaggagagaacaagcactatgaggtagcaaagaaa
tgtgttgaggatttggcactctacttaaagccattaagtggaggaaaaggagttgctagt
ttgaatcagagtgcgctgagccgtccaatgcaaaggaaactggtgacactggtgaactgt
cagctggtggaggaggagggtcgtgttagagccatgcgggcagcacgctcgcttggtgag
agaactgtaacagaactgattttacagcaccagaaccctcagcaactgtctgccaatctc
tgggctgctgttagggcacgaggatgccagttcctagggccagctatgcaagaagaagct
ttgaaacttgtgttacttgcacttgaagatggctctgcactctcaagaaaagttttggta
ctttttgttgtgcaaaggctagaaccaagatttcctcaggcatcaaaaacaagcattggt
catgttgtgcaactactgtatcgagcatcatgctttaaggtcactaaaagggatgaggat
tcttctcttatgcagcttaaagaggaatttcggagttatgaggctttgcggagggagcat
gatgcccaaattgtccacattgccatggaagcgggacttcgaatatcaccagaacagtgg
tcttccctcctttatggtgacttggcacataagtcacacatgcaatccattattgacaag
ctccagtctccagaatcatttgcaaaaagcgtacaggagttgacaattgtcttgcaacgt
acaggtgatccagcaaatttaaacagacttaggcctcacttagagcttctggcaaacata
gatcctaatccagatgcaacttctccaacatgggagcagctggaaaatgcgatggtggca
gtgaagactgtggtacatggactggtggactttattcagaactatagtagaaaaggtcat
gaaacaccacagccgcaaacaaatagcaaatataaaacaagtatgtgcagagatctgcga
cagcaagggggatgtccacgaggaactaactgtacatttgctcactctcaggaagagctt
gaaaagtatcgtttgagaaacaaaaagatcagcgcaactgtgagaacattccctctgcta
aataaagccagtgtcaacagcacagtctcaaccacagcaggaagtgtaatctctgtcata
ggaagcagtgaaacaacaggaaaaatggttccaagttccaatgggattgctaatgtggaa
agtggtgttcctcaattgattcctcgctgtgctgacacctccttaagagctctggagaac
atcaagaaagggggaaagcctggaaccagtggtcaaaatgtttctgggtctcctacagaa
tcattatctgaaaataaaatttgttctccaccaaagacacctgtaagccaggcagccgct
acctcagctggtggtcctaatattggaactgagatgaattccctgcctccaaaatccagc
ccatttgtaaccagagtacctgtctaccctccacattctgataatgttcagtattttcaa
gatcccaggacccaattgtcctatgaagttccacaatacccacagacaggatactaccca
ccacctccaacagtaccagctggtgtggctccttgtgttcctcgctttgtgaggtccagt
aacgttacagaagcctccctcccacctgcttccgtgccatatgccgaacattatagtaca
tttccccctcgagatcgactgaattctccctaccaacctcctcctccgcagccgtatgga
ccagttcctcccgtcccttctggaatgtatgctccggtgtacgacagcaggcgcatatgg
cgtccccagatgtacccaagggatgacattattaggagcaattctttacctccaatggat
gtgatgcactcatctgtctatcagacatcattgcgtgagagatataattcgttggatggg
tattactccatggcttgccagcctcctaatgagcagaggactgtgcctttaccaagggag
ccttgtggtcacttgaagaccagttacgatgatcatttaagacgaaagccagagcagtgg
gcacagtaccactcgcaaaaaacacctcttgtgtcctcaactcttcctatggcaacacag
tctccaacaccaccttctcctctcttcagtgttgacttcagcacagagttctcagagagc
gttgctgacctgagtggtactaaatttgaggaagaccatctttcacactactcgccctgg
tcctgtggtactattggttcctgcataaatgccatcgactcagagcccaaggatgtaatt
gccaattcaaatgctgtgttaatggatctggacagtggggatgttaagaggagagttcat
ctatttgaaactcagagaagggcaaaggaagaagatcctataattccctttagtgatgga
ccgattatctccaagtggggtgcaatctccagatcatcgcgcacaggttatcacacaaca
gaccctattcaggccactgcttcccaaggaagtgctactaagcccatcagcgtatcagat
tatgtcccttacgttaatgctgttgattcaagatggagttctggtggctcagattctact
tcttcagcacgctatgtagaacgggacagatttatagtcactgatttatctggtcacaga
aagcattccagtactggggatctaccgagcattgaactacaacaggctaaaagtaattca
ttgttacttcagagagaggctaatgcactagccatgcaacagaagtggaattccctagat
gaaggcagtcgccttaccttaaatcttttaagcaaggaaattgatctgaggaatggtgag
actgactatattgaagactgtgcagacacaaagccagatcgagatattgaattagagctt
tcggctcttgatactgatgaacctgatgggcagggtgaacaaatagaggaaattctggac
atacagctaggtatcagttctcgagatgaaaagctactcaatggagcaactatagagaac
ggacactcactcaagcaacaccaaaaggaacctttggagcagaagaaacaaagtttaggt
gaagaccttgtgattctaaaggagcagaaaacagtcctgcccgtaacttcttgcttcagc
cagccgatcacaggatccttcagcaatgcaagcagcctgcccatcagcacatctgtcagc
atcggcagcctcataatgaaaagtgctcatagtatgtctgaggataaaaacgacttttta
aagcccattgcaaatggcaagatggttaacagctga
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integrated database retrieval system
